Pre_GI: BLASTP Hits

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Query: NC_008268:361424:366327 Rhodococcus sp. RHA1, complete genome

Start: 366327, End: 367085, Length: 759

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017186:2252438:225483922548392255594756Amycolatopsis mediterranei S699 chromosome, complete genomeshort-chain dehydrogenase1e-0757
NC_014318:2252417:225481822548182255573756Amycolatopsis mediterranei U32 chromosome, complete genomeshort-chain dehydrogenase1e-0757
NC_011891:3369170:338781233878123388528717Anaeromyxobacter dehalogenans 2CP-1, complete genomeshort-chain dehydrogenase/reductase SDR3e-1168.9
NC_008061:2773670:267126713408738Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceshort-chain dehydrogenase/reductase SDR3e-0859.3
NC_008543:2474002:247514124751412475758618Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceshort-chain dehydrogenase/reductase SDR2e-0652.8
NC_010515:1900967:191842719184271919164738Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceshort-chain dehydrogenase/reductase SDR3e-0859.3
NC_015376:3320818:332642033264203327136717Burkholderia gladioli BSR3 chromosome chromosome 2, completeshort-chain dehydrogenase/reductase SDR1e-1273.6
NC_013132:6385223:640381764038176404560744Chitinophaga pinensis DSM 2588, complete genomeshort-chain dehydrogenase/reductase SDR1e-0653.9
NC_007164:62816:652596525966065807Corynebacterium jeikeium K411, complete genomeputative oxidoreductase8e-0651.2
NC_014500:2019113:202834620283462029119774Dickeya dadantii 3937 chromosome, complete genomeoxidoreductase3e-0755.8
NC_012912:2800884:280688128068812807627747Dickeya zeae Ech1591, complete genomeshort-chain dehydrogenase/reductase SDR3e-0755.8
NC_014306:3210311:321500332150033215710708Erwinia billingiae Eb661, complete genomeShort-chain dehydrogenase/reductase SDR1e-1067.4
NC_014828:541874:564656564656565375720Ethanoligenens harbinense YUAN-3 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR2e-0756.2
NC_010125:2813653:282168628216862822402717Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein8e-1064.3
NC_012808:1122341:115260811526081153330723Methylobacterium extorquens AM1, complete genomeshort-chain dehydrogenase/reductase1e-0860.5
NC_020126:7015976:701861170186117019327717Myxococcus stipitatus DSM 14675, complete genomeshort chain dehydrogenase5e-2098.2
NC_010628:2418000:242877724287772429526750Nostoc punctiforme PCC 73102, complete genomeshort-chain dehydrogenase/reductase SDR1e-0653.5
NC_016113:1143580:116088911608891161710822Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencehypothetical protein1e-0756.6
NC_015957:5225903:523357652335765234457882Streptomyces violaceusniger Tu 4113 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR5e-0651.6