Pre_GI: BLASTP Hits

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Query: NC_008268:2313583:2315630 Rhodococcus sp. RHA1, complete genome

Start: 2315630, End: 2315995, Length: 366

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012522:2031786:203435520343552034720366Rhodococcus opacus B4, complete genomehypothetical membrane protein5e-42169
NC_011147:3789696:379057537905753790922348Salmonella enterica subsp. enterica serovar Paratyphi A strinner membrane protein6e-1166.2
NC_006511:3794017:379489637948963795243348Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative inner membrane protein6e-1166.2
NC_011083:4020000:402094540209454021292348Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,inner membrane protein YidH6e-1166.2
NC_011274:3799696:381714838171483817495348Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein8e-1165.9
NC_011205:4038884:403976340397634040110348Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein8e-1165.9
NC_011094:3887648:388852738885273888874348Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein8e-1165.9
NC_011149:3930358:393123739312373931584348Salmonella enterica subsp. enterica serovar Agona str. SL483,inner membrane protein YidH8e-1165.9
NC_003197:4005857:400673640067364007083348Salmonella typhimurium LT2, complete genomeputative inner membrane protein8e-1165.9
NC_011080:3976441:397732039773203977667348Salmonella enterica subsp. enterica serovar Newport str. SL254,inner membrane protein YidH8e-1165.9
NC_006905:3942753:394639139463913946738348Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein8e-1165.9
NC_011294:3880500:388139338813933881740348Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein8e-1165.9
NC_016810:4027170:402804940280494028396348Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein8e-1165.9
NC_014165:2533040:255997925599792560314336Thermobispora bispora DSM 43833 chromosome, complete genomehypothetical protein7e-1165.9
NC_017046:4025998:402687740268774027224348Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein8e-1165.9
NC_016863:3967156:396803539680353968382348Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein8e-1165.9
NC_016860:4110968:411184741118474112194348Salmonella enterica subsp. enterica serovar Typhimurium strinner membrane protein YidH8e-1165.9
NC_016857:4025767:402805040280504028397348Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein8e-1165.9
NC_016856:4019549:402042840204284020775348Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein8e-1165.9
NC_016831:3779611:379797937979793798326348Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein8e-1165.9
NC_004337:3590323:389642338964233896770348Shigella flexneri 2a str. 301, complete genomehypothetical protein9e-1062.4
NC_003198:3824187:384164538416453841992348Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-0960.5