Pre_GI: BLASTP Hits

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Query: NC_008262:67711:71133 Clostridium perfringens SM101, complete genome

Start: 71133, End: 71894, Length: 762

Host Lineage: Clostridium perfringens; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This is a enterotoxin-producing food poisoning strain. Causative agent of gas gangrene. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a causative agent of a wide spectrum of necrotic enterotoxicoses. It also causes such animal diseases as lamb dysentery, ovine enterotoxemia (struck), pulpy kidney disease in lambs and other enterotoxemias in lambs and calves. It is commonly found in the environment (soil, sewage) and in the animal and human gastrointestinal tract as a member of the normal microflora. It is a fast growing (generation time 8-10 min) anaerobic flesh-eater. Active fermentative growth is accompanied by profuse generation of molecular hydrogen and carbon dioxide. It is also oxygen tolerant which makes it an easy object to work with in laboratories. C. perfringens have been developed and the species became a model organism in clostridial genetic studies. Known isolates belong to five distinct types (A, B, C, D, and E) that are distinguished based on the specific extracellular toxins they produce. Known isolates belong to five distinct types (A, B, C, D, and E) that are distinguished based on the specific extracellular toxins they produce. All types produce the alpha toxin (phospholipase C). Type A strains that cause gas gangrene produce alpha toxin, theta (hemolysin), kappa (collagenase), mu (hyaluronidase), nu (DNAse) and neuraminidase which are all the enzymatic factors aiding the bacterium in invading and destruction of the host tissues. Type C strains produce alpha toxin, beta toxin and prefringolysin enteritis. In addition to alpha toxin, Type B strains produce beta toxin, types B and D produce the pore forming epsilon toxin and type E strains produce iota toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003366:64908:683476834769108762Clostridium perfringens str. 13, complete genomehypothetical protein5e-117420
NC_008261:64678:681186811868879762Clostridium perfringens ATCC 13124, complete genomeHesA/MoeB/ThiF family protein5e-117420
NC_010674:3619722:362213336221333622900768Clostridium botulinum B str. Eklund 17B, complete genomethiF domain protein1e-79296
NC_010723:3434000:343649034364903437257768Clostridium botulinum E3 str. Alaska E43, complete genomethiF domain protein1e-78293
NC_014328:2326930:233035423303542331109756Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative molybdopterin/thiamine biosynthesis protein3e-77288
NC_017295:1036348:103894910389491039704756Clostridium acetobutylicum EA 2018 chromosome, complete genomeDinucleotide-utilizing enzyme4e-76284
NC_003030:1037885:103950110395011040256756Clostridium acetobutylicum ATCC 824, complete genomeDinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis family 14e-76284
NC_015687:1037706:103932210393221040077756Clostridium acetobutylicum DSM 1731 chromosome, complete genomemolybdopterin/thiamine biosynthesis family protein4e-76284
NC_016012:16134:533425334254106765Candidatus Arthromitus sp. SFB-rat-Yit, complete genomemolybdopterin/thiamine biosynthesis family protein1e-70266
NC_012658:35500:391873918739891705Clostridium botulinum Ba4 str. 657 chromosome, complete genomethiF domain-containing protein2e-66251
NC_017297:33519:406224062241326705Clostridium botulinum F str. 230613 chromosome, complete genomethiF domain-containing protein7e-65247
NC_009699:33452:405544055441258705Clostridium botulinum F str. Langeland chromosome, complete genomeThiF domain-containing protein7e-65247
NC_009698:38000:452124521245916705Clostridium botulinum A str. Hall chromosome, complete genomeThiF domain-containing protein7e-65247
NC_009697:38000:452124521245916705Clostridium botulinum A str. ATCC 19397 chromosome, completeThiF domain-containing protein7e-65247
NC_009495:38000:451974519745901705Clostridium botulinum A str. ATCC 3502 chromosome, complete genomethiF domain-containing protein7e-65247
NC_012563:36000:396113961140315705Clostridium botulinum A2 str. Kyoto, complete genomethiF domain protein1e-64246
NC_010516:42475:452884528845992705Clostridium botulinum B1 str. Okra, complete genomethiF domain protein2e-64245
NC_010520:35845:394033940340107705Clostridium botulinum A3 str. Loch Maree, complete genomethiF domain protein6e-64243
NC_015425:2690448:272870827287082729442735Clostridium botulinum BKT015925 chromosome, complete genomethiF domain-containing protein6e-63240
NC_018664:1795223:180108618010861801871786Clostridium acidurici 9a chromosome, complete genomemolybdopterin/thiamine biosynthesis protein ThiF1e-61236
NC_008593:2457594:249461824946182495334717Clostridium novyi NT, complete genomeThiF family protein1e-61236
NC_009012:3653111:367095336709533671717765Clostridium thermocellum ATCC 27405, complete genomeUBA/THIF-type NAD/FAD binding fold7e-59227
NC_015913:35837:504565045651031576Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeUBA/THIF-type NAD/FAD binding protein4e-56218
NC_004722:4333643:433487443348744335641768Bacillus cereus ATCC 14579, complete genomeMolybdopterin biosynthesis MoeB protein4e-43174
NC_011725:4373721:437811043781104378877768Bacillus cereus B4264 chromosome, complete genomehesA/moeB/thiF family protein9e-43173
NC_013520:1559000:157661515766151577322708Veillonella parvula DSM 2008, complete genomeUBA/THIF-type NAD/FAD binding protein3e-39162
NC_009483:5113729:511870651187065119476771Geobacter uraniireducens Rf4 chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein5e-39160
NC_015389:809474:842751842751843650900Coriobacterium glomerans PW2 chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein3e-37155
NC_007644:1694879:171123217112321711960729Moorella thermoacetica ATCC 39073, complete genomeUBA/THIF-type NAD/FAD binding fold2e-35149
NC_004459:1794540:180041518004151801224810Vibrio vulnificus CMCP6 chromosome I, complete sequenceDinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis family 15e-32137
NC_015577:3244857:324403632440363244860825Treponema azotonutricium ZAS-9 chromosome, complete genomeHesA/MoeB/ThiF family protein9e-32137
NC_015160:136055:155663155663156379717Odoribacter splanchnicus DSM 20712 chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein2e-31136
NC_010278:315941:332546332546333310765Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hypothetical protein1e-31136
NC_009053:313779:327747327747328511765Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein2e-31135
NC_010939:321492:337361337361338125765Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein4e-31135
NC_013410:1285857:130902513090251309858834Fibrobacter succinogenes subsp. succinogenes S85 chromosome,UBA/THIF-type NAD/FAD binding protein7e-31134
NC_011761:2131911:213329921332992134045747Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeHesA/MoeB/ThiF family protein4e-30131
NC_007963:3225306:322706032270603227884825Chromohalobacter salexigens DSM 3043, complete genomeUBA/THIF-type NAD/FAD binding fold1e-29130
NC_010498:3023442:302833630283363029136801Escherichia coli SMS-3-5, complete genomeThiF family protein9e-30130
NC_007613:2699500:270166427016642702470807Shigella boydii Sb227, complete genomeputative enzyme9e-30130
NC_011283:942594:965074965074965883810Klebsiella pneumoniae 342 chromosome, complete genomeThiF family protein2e-29129
NC_013361:3823347:382824038282403829046807Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-29129
NC_011745:3197584:320247732024773203283807Escherichia coli ED1a chromosome, complete genomehypothetical protein1e-29129
NC_014033:3462437:348171434817143482523810Prevotella ruminicola 23 chromosome, complete genomeThiF family protein1e-29129
NC_008700:672326:672326672326673159834Shewanella amazonensis SB2B, complete genomeHesA/MoeB/ThiF family protein5e-29128
NC_015501:1341661:136200613620061362749744Porphyromonas asaccharolytica DSM 20707 chromosome, completeUBA/THIF-type NAD/FAD binding protein8e-29127
NC_016513:54802:755427554276312771Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeThiF family protein1e-28126
NC_010334:835500:836978836978837799822Shewanella halifaxensis HAW-EB4, complete genomeUBA/THIF-type NAD/FAD binding protein4e-28125
NC_015581:128350:145937145937146668732Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein4e-28125
NC_011566:4709672:473177647317764732603828Shewanella piezotolerans WP3, complete genomeUBA/THIF-type NAD/FAD binding fold protein1e-26120
NC_017518:1558000:157439915743991575175777Neisseria meningitidis NZ-05/33 chromosome, complete genomethiF family protein5e-26117
NC_017505:1516348:153332315333231534099777Neisseria meningitidis alpha710 chromosome, complete genomeHesA/MoeB/ThiF family protein5e-26117
NC_009256:2945059:294776229477622948619858Burkholderia vietnamiensis G4 chromosome 1, complete sequenceUBA/THIF-type NAD/FAD binding protein3e-25115
NC_012856:798922:822204822204823106903Ralstonia pickettii 12D chromosome 1, complete genomeUBA/THIF-type NAD/FAD binding protein2e-24113
NC_015563:3786192:380888738088873809714828Delftia sp. Cs1-4 chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein4e-24112
NC_015138:2025000:203173220317322032631900Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeUBA/THIF-type NAD/FAD-binding protein9e-24110
NC_014910:1708045:171075017107501711514765Alicycliphilus denitrificans BC chromosome, complete genomeuba/thif-type nad/fad binding protein9e-24110
NC_004663:4692339:471649547164954717211717Bacteroides thetaiotaomicron VPI-5482, complete genomeThiF family protein, putative dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis2e-23109
NC_014931:2929695:293223429322342933079846Variovorax paradoxus EPS chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein3e-1685.9
NC_012791:2832001:283815828381582838952795Variovorax paradoxus S110 chromosome 1, complete genomeUBA/THIF-type NAD/FAD binding protein2e-1583.2
NC_009662:1329788:133056113305611331202642Nitratiruptor sp. SB155-2, complete genomehypothetical protein2e-1582.8
NC_014253:933261:943922943922944647726Methanohalobium evestigatum Z-7303 chromosome, complete genomeUBA/THIF-type NAD/FAD-binding protein4e-1272
NC_014562:2563466:2587477258747725885951119Pantoea vagans C9-1 chromosome, complete genomePaaA3e-1169.3
NC_004842:62000:706207062071426807Anaplasma marginale str. St. Maries, complete genomethiamine biosynthesis protein5e-1168.2
NC_007517:2241104:229801122980112298883873Geobacter metallireducens GS-15, complete genomeUBA/THIF-type NAD/FAD binding fold6e-1167.8
NC_018876:996855:102367910236791024416738Methanolobus psychrophilus R15 chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein1e-1067.4
NC_014972:2371647:239635223963522397035684Desulfobulbus propionicus DSM 2032 chromosome, complete genomeUBA/THIF-type NAD/FAD-binding protein1e-1067
NC_012563:2203037:220652322065232207206684Clostridium botulinum A2 str. Kyoto, complete genomemolybdopterin biosynthesis protein MoeB4e-1065.5
NC_009495:2056546:206003220600322060715684Clostridium botulinum A str. ATCC 3502 chromosome, complete genomemolybdopterin biosynthesis protein MoeB4e-1065.5
NC_009697:1985187:198867319886731989356684Clostridium botulinum A str. ATCC 19397 chromosome, completemolybdopterin biosynthesis protein MoeB4e-1065.5
NC_009698:1985404:198889019888901989573684Clostridium botulinum A str. Hall chromosome, complete genomemolybdopterin biosynthesis protein MoeB4e-1065.5
NC_003106:2272313:227622822762282277091864Sulfolobus tokodaii str. 7, complete genomehypothetical hesA protein4e-1065.1
NC_015572:1421782:143021514302151431072858Methylomonas methanica MC09 chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein8e-1064.3
NC_016112:3190891:320561632056163206476861Methylomicrobium alcaliphilum chromosome, complete genomemolybdopterin biosynthesis protein MoeB8e-1064.3
NC_012912:2998511:3010253301025330113741122Dickeya zeae Ech1591, complete genomeUBA/THIF-type NAD/FAD binding protein9e-1063.9
NC_010516:2064027:206796820679682068651684Clostridium botulinum B1 str. Okra, complete genomemolybdopterin biosynthesis protein MoeB1e-0963.5
NC_010520:2171584:217738621773862178069684Clostridium botulinum A3 str. Loch Maree, complete genomemolybdopterin biosynthesis protein MoeB3e-0962.4
NC_011769:820521:8373698373698402752907Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeUBA/THIF-type NAD/FAD binding protein3e-0962.4
NC_009699:2116500:211806121180612118744684Clostridium botulinum F str. Langeland chromosome, complete genomemolybdopterin biosynthesis protein MoeB4e-0962
NC_017297:2114222:211826421182642118845582Clostridium botulinum F str. 230613 chromosome, complete genomemolybdopterin biosynthesis protein MoeB4e-0961.6
NC_015666:1293500:130615513061551306994840Halopiger xanaduensis SH-6 chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein5e-0961.6
NC_009012:2953638:300844930084493009261813Clostridium thermocellum ATCC 27405, complete genomeUBA/THIF-type NAD/FAD binding fold9e-0960.8
NC_009256:277020:2935402935402949791440Burkholderia vietnamiensis G4 chromosome 1, complete sequenceUBA/THIF-type NAD/FAD binding protein1e-0860.5
NC_014820:1989500:2007223200722320085991377Cenarchaeum symbiosum A, complete genome4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate synthesis protein1e-0860.5
NC_012526:4462:235402354024280741Deinococcus deserti VCD115, complete genomeputative DNA-binding protein HU Histone-like protein2e-0859.7
NC_013592:1056500:1070853107085310719381086Dickeya dadantii Ech586, complete genomeUBA/THIF-type NAD/FAD binding protein3e-0859.3
NC_007298:2568851:258318125831812584053873Dechloromonas aromatica RCB, complete genomehypothetical protein2e-0859.3
NC_013385:1007616:102430510243051025039735Ammonifex degensii KC4, complete genomeUBA/THIF-type NAD/FAD binding protein4e-0858.5
NC_007181:141299:144039144039144911873Sulfolobus acidocaldarius DSM 639, complete genomedinucleotide-utilizing enzyme5e-0858.5
NC_016790:31240:3202532025330351011Corynebacterium diphtheriae VA01 chromosome, complete genomethiamine biosynthesis protein5e-0858.2
NC_009440:1810301:182305518230551823903849Metallosphaera sedula DSM 5348 chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein6e-0858.2
NC_014221:3068222:308040930804093081206798Truepera radiovictrix DSM 17093 chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein7e-0857.8
NC_010622:249625:307568307568308326759Burkholderia phymatum STM815 chromosome 1, complete sequenceUBA/THIF-type NAD/FAD binding protein1e-0757.4
NC_014836:2620871:262209626220962622869774Desulfurispirillum indicum S5 chromosome, complete genomeUBA/THIF-type NAD/FAD-binding protein1e-0757.4
NC_011832:1148859:117121311712131172013801Candidatus Methanosphaerula palustris E1-9c, complete genomeUBA/THIF-type NAD/FAD binding protein2e-0756.6
NC_015518:1095879:110984811098481110717870Acidianus hospitalis W1 chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein3e-0755.8
NC_015474:487517:498929498929499621693Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein3e-0755.8
NC_014041:3229867:3229867322986732309641098Zunongwangia profunda SM-A87 chromosome, complete genomerhodanese-like protein3e-0755.8
NC_017033:1672313:1673267167326716744811215Frateuria aurantia DSM 6220 chromosome, complete genomedinucleotide-utilizing protein3e-0755.5
NC_015435:354837:361332361332362180849Metallosphaera cuprina Ar-4 chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein3e-0755.5
NC_002516:2306776:2314512231451223156901179Pseudomonas aeruginosa PAO1, complete genomeprobable molybdopterin biosynthesis protein MoeB4e-0755.5
NC_008789:1641774:165293916529391653802864Halorhodospira halophila SL1, complete genomeUBA/THIF-type NAD/FAD binding protein7e-0754.3
NC_010546:553774:575470575470576285816Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceputative molybdenum cofactor biosynthesis/nitrogen fixation related protein1e-0653.9
NC_013715:1907503:1914862191486219159171056Rothia mucilaginosa DY-18, complete genomedinucleotide-utilizing enzyme1e-0653.9
NC_011283:1811000:1813785181378518149601176Klebsiella pneumoniae 342 chromosome, complete genomethiazole biosynthesis adenylyltransferase ThiF/rhodanese domain protein1e-0653.9
NC_003228:2973266:298852129885212989222702Bacteroides fragilis NCTC 9343, complete genomeputative molybdopterin biosynthesis-related protein1e-0653.5
NC_013353:922937:949002949002949751750Escherichia coli O103:H2 str. 12009, complete genomemolybdopterin synthase sulfurylase2e-0653.5
AP010958:922937:949002949002949751750Escherichia coli O103:H2 str. 12009 DNA, complete genomemolybdopterin synthase sulfurylase2e-0653.5
NC_014219:2509062:2531964253196425329831020Bacillus selenitireducens MLS10 chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein2e-0653.1
NC_012912:4428111:4440209444020944413421134Dickeya zeae Ech1591, complete genomeUBA/THIF-type NAD/FAD binding protein2e-0652.8
NC_006347:2899653:291490729149072915608702Bacteroides fragilis YCH46, complete genomemolybdopterin biosynthesis protein2e-0652.8
NC_010067:3247169:325703932570393258007969Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-0652.8
NC_008816:1476209:1508150150815015092951146Prochlorococcus marinus str. AS9601, complete genomemolybdopterin biosynthesis protein2e-0652.8
NC_020211:1655826:167027416702741671029756Serratia marcescens WW4, complete genomemolybdopterin synthase sulfurylase3e-0652.4
NC_012912:2901021:290683729068372907595759Dickeya zeae Ech1591, complete genomemolybdopterin synthase sulfurylase MoeB3e-0652.4
NC_015425:718384:731818731818732459642Clostridium botulinum BKT015925 chromosome, complete genomethiamine biosynthesis protein ThiF4e-0652
NC_013364:928486:953273953273954022750Escherichia coli O111:H- str. 11128, complete genomemolybdopterin synthase sulfurylase4e-0652
NC_012796:4075583:419374541937454194620876Desulfovibrio magneticus RS-1, complete genomeThiF family protein4e-0652
NC_019896:2805098:2828629282862928296391011Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeHydroxyethylthiazole phosphate biosynthesis ThiF4e-0652
NC_018748:2119679:2134957213495721360091053Emticicia oligotrophica DSM 17448 chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein4e-0652
NC_011295:246000:248481248481249242762Coprothermobacter proteolyticus DSM 5265, complete genomemolybdopterin biosynthesis3e-0652
NC_015410:1202370:122671812267181227470753Pseudomonas mendocina NK-01 chromosome, complete genomemolybdopterin biosynthesis protein MoeB6e-0651.6
NC_014500:1862000:191335919133591914114756Dickeya dadantii 3937 chromosome, complete genomemolybdopterin synthase sulfurylase7e-0651.2
NC_008312:1725763:1743770174377017449451176Trichodesmium erythraeum IMS101, complete genomeUBA/THIF-type NAD/FAD binding fold7e-0651.2
NC_005945:754517:7582367582367592551020Bacillus anthracis str. Sterne, complete genomemolybdopterin biosynthesis protein MoeB7e-0651.2