Pre_GI: BLASTP Hits

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Query: NC_008262:2348328:2349485 Clostridium perfringens SM101, complete genome

Start: 2349485, End: 2351239, Length: 1755

Host Lineage: Clostridium perfringens; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This is a enterotoxin-producing food poisoning strain. Causative agent of gas gangrene. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a causative agent of a wide spectrum of necrotic enterotoxicoses. It also causes such animal diseases as lamb dysentery, ovine enterotoxemia (struck), pulpy kidney disease in lambs and other enterotoxemias in lambs and calves. It is commonly found in the environment (soil, sewage) and in the animal and human gastrointestinal tract as a member of the normal microflora. It is a fast growing (generation time 8-10 min) anaerobic flesh-eater. Active fermentative growth is accompanied by profuse generation of molecular hydrogen and carbon dioxide. It is also oxygen tolerant which makes it an easy object to work with in laboratories. C. perfringens have been developed and the species became a model organism in clostridial genetic studies. Known isolates belong to five distinct types (A, B, C, D, and E) that are distinguished based on the specific extracellular toxins they produce. Known isolates belong to five distinct types (A, B, C, D, and E) that are distinguished based on the specific extracellular toxins they produce. All types produce the alpha toxin (phospholipase C). Type A strains that cause gas gangrene produce alpha toxin, theta (hemolysin), kappa (collagenase), mu (hyaluronidase), nu (DNAse) and neuraminidase which are all the enzymatic factors aiding the bacterium in invading and destruction of the host tissues. Type C strains produce alpha toxin, beta toxin and prefringolysin enteritis. In addition to alpha toxin, Type B strains produce beta toxin, types B and D produce the pore forming epsilon toxin and type E strains produce iota toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015573:2323268:2336221233622123379151695Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehypothetical protein1e-111404
NC_014217:2760898:2784009278400927856881680Starkeya novella DSM 506 chromosome, complete genomeprotein of unknown function DUF2622e-57223
NC_020210:3341976:3386732338673233883511620Geobacillus sp. GHH01, complete genomehypothetical protein2e-56221
NC_012793:3275751:3277692327769232793111620Geobacillus sp. WCH70, complete genomeprotein of unknown function DUF2622e-56220
NC_006510:3321426:3334788333478833364101623Geobacillus kaustophilus HTA426, complete genomehypothetical protein4e-56219
NC_009138:3153576:3164695316469531663381644Herminiimonas arsenicoxydans, complete genomehypothetical protein6e-55216
NC_013522:1538994:1549814154981415516161803Thermanaerovibrio acidaminovorans DSM 6589, complete genomeprotein of unknown function DUF2628e-55215
NC_008435:1131242:1156790115679011585111722Rhodopseudomonas palustris BisA53, complete genomeprotein of unknown function DUF2623e-53209
NC_007958:4371125:4389999438999943917201722Rhodopseudomonas palustris BisB5, complete genomeprotein of unknown function DUF2621e-52208
NC_014210:3671495:3679149367914936808161668Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,protein of unknown function DUF2622e-50200
NC_010468:4059436:4066582406658240682341653Escherichia coli ATCC 8739, complete genomeprotein of unknown function DUF2623e-50200
NC_016593:3402205:3415269341526934167801512Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein2e-47191
NC_006361:4597718:4608933460893346106031671Nocardia farcinica IFM 10152, complete genomehypothetical protein1e-43178
NC_015422:2126614:2146418214641821481361719Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein2e-42174
NC_013595:8603188:8615007861500786175352529Streptosporangium roseum DSM 43021, complete genomehypothetical protein2e-23111
NC_013209:2032500:2039832203983220416731842Acetobacter pasteurianus IFO 3283-01, complete genomehypothetical protein1e-22108
NC_017100:2035000:2042472204247220443131842Acetobacter pasteurianus IFO 3283-03, complete genomehypothetical protein1e-22108
NC_017108:2032500:2039809203980920416501842Acetobacter pasteurianus IFO 3283-12, complete genomehypothetical protein1e-22108
NC_017111:2032500:2039827203982720416681842Acetobacter pasteurianus IFO 3283-32, complete genomehypothetical protein1e-22108
NC_017121:2032500:2039814203981420416551842Acetobacter pasteurianus IFO 3283-07, complete genomehypothetical protein1e-22108
NC_017125:2035000:2042452204245220442931842Acetobacter pasteurianus IFO 3283-22, complete genomehypothetical protein1e-22108
NC_017146:2035000:2042494204249420443351842Acetobacter pasteurianus IFO 3283-26, complete genomehypothetical protein1e-22108
NC_017150:1940000:1947578194757819494191842Acetobacter pasteurianus IFO 3283-01-42C, complete genomehypothetical protein1e-22108
NC_020064:521500:5371525371525389421791Serratia marcescens FGI94, complete genomehypothetical protein1e-21105
NC_017379:1035464:1064610106461010663521743Helicobacter pylori Puno135 chromosome, complete genomehypothetical protein1e-21105
NC_012973:967380:9886959886959904101716Helicobacter pylori B38 chromosome, complete genomehypothetical protein3e-21103
NC_014253:1163783:1184823118482311868322010Methanohalobium evestigatum Z-7303 chromosome, complete genomehypothetical protein5e-21102
NC_009655:866281:8791778791778808951719Actinobacillus succinogenes 130Z chromosome, complete genomehypothetical protein7e-1995.9
NC_017063:775337:7943957943957965452151Helicobacter pylori ELS37 chromosome, complete genomehypothetical protein9e-1995.5
NC_013849:337350:3638843638843656901807Ferroglobus placidus DSM 10642 chromosome, complete genomehypothetical protein1e-1895.5
NC_007969:2885249:2895675289567528975341860Psychrobacter cryohalolentis K5, complete genomeprotein of unknown function DUF2621e-1895.1
NC_010831:1224000:1238801123880112408642064Chlorobium phaeobacteroides BS1, complete genomeprotein of unknown function DUF2624e-1893.6
NC_009253:529494:5481725481725501421971Desulfotomaculum reducens MI-1 chromosome, complete genomehypothetical protein6e-1892.8
NC_012988:2455807:2468245246824524700051761Methylobacterium extorquens DM4, complete genomehypothetical protein3e-1790.5
NC_004557:691944:7094797094797115542076Clostridium tetani E88, complete genomehypothetical protein5e-1790.1
NC_011958:976500:9924279924279944842058Rhodobacter sphaeroides KD131 chromosome 2, complete genomehypothetical protein4e-1790.1
NC_003888:5790104:5798773579877358004701698Streptomyces coelicolor A3(2), complete genomehypothetical protein6e-1789.7
NC_017278:258921:2731782731782750551878Thermus sp. CCB_US3_UF1 chromosome, complete genomehypothetical protein8e-1789
NC_014256:683384:7059237059237079862064Helicobacter pylori B8 chromosome, complete genomehypothetical protein8e-1789
NC_008312:959500:9615219615219633021782Trichodesmium erythraeum IMS101, complete genomeprotein of unknown function DUF2628e-1789
NC_010468:4059436:4072713407271340748062094Escherichia coli ATCC 8739, complete genomeprotein of unknown function DUF2623e-1584
NC_009972:606393:6336616336616353671707Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genomehypothetical protein4e-1583.6
NC_008529:1042220:1059981105998110624942514Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completehypothetical protein4e-1583.6
NC_007794:262402:2741812741812760761896Novosphingobium aromaticivorans DSM 12444, complete genomeprotein of unknown function DUF1524 RloF7e-1582.8
NC_017187:814940:8276108276108295021893Arcobacter butzleri ED-1, complete genomehypothetical protein2e-1481.6
NC_011000:1262324:1278691127869112804631773Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein2e-1481.3
NC_013235:508585:5189695189695207981830Nakamurella multipartita DSM 44233, complete genomeprotein of unknown function DUF2629e-1479
NC_015593:2553500:2582536258253625843201785Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completehypothetical protein1e-1379
NC_013165:329185:3698533698533719252073Slackia heliotrinireducens DSM 20476, complete genomehypothetical protein2e-1274.3
NC_013510:170199:1894511894511910311581Thermomonospora curvata DSM 43183, complete genomeprotein of unknown function DUF2627e-1272.8
NC_015577:1392390:1404933140493314069842052Treponema azotonutricium ZAS-9 chromosome, complete genomehypothetical protein2e-1171.2
NC_015676:794639:8098868098868117331848Methanosalsum zhilinae DSM 4017 chromosome, complete genomehypothetical protein2e-1171.2
NC_008618:1095000:1102720110272011051762457Bifidobacterium adolescentis ATCC 15703, complete genomehypothetical protein5e-1170.1
NC_007164:1434305:1439777143977714413961620Corynebacterium jeikeium K411, complete genomehypothetical protein6e-1169.7
NC_006138:2683545:2710892271089227123521461Desulfotalea psychrophila LSv54, complete genomehypothetical protein1e-1068.9
NC_012489:4336790:4376232437623243778931662Gemmatimonas aurantiaca T-27, complete genomehypothetical protein9e-1168.9
NC_007575:1663088:1664737166473716661341398Sulfurimonas denitrificans DSM 1251, complete genomehypothetical protein1e-1068.6
NC_008255:3331613:3357227335722733591671941Cytophaga hutchinsonii ATCC 33406, complete genomehypothetical protein2e-1068.2
NC_014391:3445672:3455832345583234583692538Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein2e-1067.8
NC_011415:1472500:1487436148743614891181683Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-1067.8
NC_015577:3589884:3608522360852236102281707Treponema azotonutricium ZAS-9 chromosome, complete genomehypothetical protein3e-1067.4
NC_008699:1132790:1164146116414611663262181Nocardioides sp. JS614, complete genomeprotein of unknown function DUF1524 RloF4e-1067
NC_014828:1932971:1942597194259719449512355Ethanoligenens harbinense YUAN-3 chromosome, complete genomeprotein of unknown function DUF2625e-1066.6
NC_008563:2909945:2918794291879429206081815Escherichia coli APEC O1, complete genomehypothetical protein8e-1065.9
NC_011742:2823000:2836105283610528380541950Escherichia coli S88 chromosome, complete genomehypothetical protein8e-1065.9
NC_007946:2894793:2903828290382829057171890Escherichia coli UTI89, complete genomehypothetical protein9e-1065.9
NC_009381:3680638:3699042369904237010241983Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein9e-1065.9
NC_013062:1141865:1156597115659711591042508Flavobacteriaceae bacterium 3519-10, complete genomeProtein of unknown function DUF262/DUF1524 RloF9e-1065.9
NC_015577:383071:3920453920453938861842Treponema azotonutricium ZAS-9 chromosome, complete genomehypothetical protein1e-0965.1
NC_008740:1459747:1482548148254814844731926Marinobacter aquaeolei VT8, complete genomeprotein of unknown function DUF1524 RloF2e-0964.3
NC_006138:2683545:2708902270890227109082007Desulfotalea psychrophila LSv54, complete genomehypothetical protein3e-0963.9
NC_002505:1892430:1908886190888619108771992Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein4e-0963.5
NC_012578:1838470:1856019185601918580101992Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein4e-0963.5
NC_012668:1688500:1736631173663117386221992Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein4e-0963.5
NC_016445:1363831:1380286138028613822771992Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein4e-0963.5
NC_016944:1937645:1955194195519419571851992Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein4e-0963.5
NC_012582:1976962:1993408199340819953991992Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein5e-0963.2
NC_009457:1444449:1461989146198914639801992Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein5e-0963.2
NC_013441:382597:4003494003494027062358Gordonia bronchialis DSM 43247, complete genomeprotein of unknown function DUF2625e-0963.2
NC_007645:3688000:3693773369377336954671695Hahella chejuensis KCTC 2396, complete genomehypothetical protein6e-0963.2
NC_018720:2138180:2155170215517021569241755Bifidobacterium asteroides PRL2011 chromosome, complete genomehypothetical protein7e-0962.8
NC_015578:2428500:2438038243803824400051968Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein7e-0962.8
NC_015067:1528984:1549820154982015517631944Bifidobacterium longum subsp. longum JCM 1217, complete genomehypothetical protein3e-0860.5
NC_017986:1885613:1906432190643219084021971Pseudomonas putida ND6 chromosome, complete genomehypothetical protein5e-0860.1
NC_011832:1399446:1411651141165114134531803Candidatus Methanosphaerula palustris E1-9c, complete genomeprotein of unknown function DUF2625e-0860.1
NC_013410:1591500:1597040159704015992652226Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein6e-0859.7
NC_015311:813989:8235068235068255452040Prevotella denticola F0289 chromosome, complete genomehypothetical protein6e-0859.7
NC_008346:2523289:2545827254582725471251299Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehypothetical protein8e-0859.3
NC_017506:1660072:1667079166707916684401362Marinobacter adhaerens HP15 chromosome, complete genomehypothetical protein1e-0758.9
NC_014614:2643203:2658648265864826603961749Clostridium sticklandii, complete genomehypothetical protein2e-0758.2
NC_017243:349144:3491443491443512342091Brachyspira intermedia PWS/A chromosome, complete genomehypothetical protein2e-0758.2
NC_017360:1052473:1076927107692710791012175Helicobacter pylori 35A chromosome, complete genomehypothetical protein DUF2622e-0758.2
NC_015732:3145634:3152635315263531543981764Spirochaeta caldaria DSM 7334 chromosome, complete genomehypothetical protein2e-0757.8
NC_012778:1573847:1580679158067915832132535Eubacterium eligens ATCC 27750, complete genomehypothetical protein3e-0757.8
NC_015577:383071:3907003907003920551356Treponema azotonutricium ZAS-9 chromosome, complete genomehypothetical protein3e-0757.8
NC_016940:3696570:3704490370449037065262037Saprospira grandis str. Lewin chromosome, complete genomehypothetical protein3e-0757.4
NC_015634:652000:6657936657936670911299Bacillus coagulans 2-6 chromosome, complete genomehypothetical protein3e-0757.4
NC_011757:3486283:3495023349502334968881866Methylobacterium chloromethanicum CM4, complete genomeprotein of unknown function DUF2623e-0757.4
NC_008212:1386834:139606113960611396723663Haloquadratum walsbyi DSM 16790, complete genomehypothetical protein3e-0757
NC_015161:1556766:1577099157709915800292931Deinococcus proteolyticus MRP chromosome, complete genomehypothetical protein4e-0757
NC_009337:89631:1009151009151028941980Chlorobium phaeovibrioides DSM 265 chromosome, complete genomehypothetical protein4e-0757
NC_014314:1230687:1241852124185212448963045Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, complete5e-0756.6
NC_017506:1660072:1668437166843716704432007Marinobacter adhaerens HP15 chromosome, complete genomehypothetical protein6e-0756.2
NC_015501:868909:8753028753028771521851Porphyromonas asaccharolytica DSM 20707 chromosome, completeprotein of unknown function DUF2621e-0655.5
NC_016027:54305:6947669476712751800Gluconacetobacter xylinus NBRC 3288, complete genomehypothetical protein1e-0655.5
NC_014377:1943476:1950044195004419516811638Thermosediminibacter oceani DSM 16646 chromosome, complete genomeprotein of unknown function DUF1524 RloF2e-0655.1
NC_018870:2316499:2326740232674023284251686Thermacetogenium phaeum DSM 12270 chromosome, complete genomehypothetical protein3e-0654.3
NC_015634:652000:6670956670956688731779Bacillus coagulans 2-6 chromosome, complete genomehypothetical protein3e-0653.9
NC_008346:2523289:2544045254404525458261782Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehypothetical protein4e-0653.5
NC_016944:514742:5403235403235421341812Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein7e-0652.8