Pre_GI: BLASTP Hits

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Query: NC_008261:64678:98545 Clostridium perfringens ATCC 13124, complete genome

Start: 98545, End: 99312, Length: 768

Host Lineage: Clostridium perfringens; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: The species type strain, originally isolated from a human gas gangrene patient. Causative agent of gas gangrene. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a causative agent of a wide spectrum of necrotic enterotoxicoses. It also causes such animal diseases as lamb dysentery, ovine enterotoxemia (struck), pulpy kidney disease in lambs and other enterotoxemias in lambs and calves. It is commonly found in the environment (soil, sewage) and in the animal and human gastrointestinal tract as a member of the normal microflora. It is a fast growing (generation time 8-10 min) anaerobic flesh-eater. Active fermentative growth is accompanied by profuse generation of molecular hydrogen and carbon dioxide. It is also oxygen tolerant which makes it an easy object to work with in laboratories. C. perfringens have been developed and the species became a model organism in clostridial genetic studies. Known isolates belong to five distinct types (A, B, C, D, and E) that are distinguished based on the specific extracellular toxins they produce. Known isolates belong to five distinct types (A, B, C, D, and E) that are distinguished based on the specific extracellular toxins they produce. All types produce the alpha toxin (phospholipase C). Type A strains that cause gas gangrene produce alpha toxin, theta (hemolysin), kappa (collagenase), mu (hyaluronidase), nu (DNAse) and neuraminidase which are all the enzymatic factors aiding the bacterium in invading and destruction of the host tissues. Type C strains produce alpha toxin, beta toxin and prefringolysin enteritis. In addition to alpha toxin, Type B strains produce beta toxin, types B and D produce the pore forming epsilon toxin and type E strains produce iota toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:2072703:208630320863032087091789Clostridium botulinum BKT015925 chromosome, complete genomemyo-inositol catabolism IolB domain-containing protein8e-75280
NC_007103:291000:306351306351307142792Bacillus cereus E33L plasmid pE33L466, complete sequencemyo-inositol catabolism protein9e-71266
NC_013517:4208939:425566542556654256453789Sebaldella termitidis ATCC 33386, complete genomeMyo-inositol catabolism IolB domain protein1e-70266
NC_019978:2506472:251641825164182517209792Halobacteroides halobius DSM 5150, complete genomeputative enzyme involved in inositol metabolism7e-66250
NC_016633:3402242:341259334125933413399807Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeputative enzyme involved in inositol metabolism2e-32139
NC_015690:1967244:202261920226192023446828Paenibacillus mucilaginosus KNP414 chromosome, complete genomeIolB2e-0963.2
NC_016935:2567039:257284725728472573674828Paenibacillus mucilaginosus 3016 chromosome, complete genomeprotein IolB4e-0962
NC_009328:1903291:191816719181671918991825Geobacillus thermodenitrificans NG80-2 chromosome, complete genomemyo-inositol catabolism protein IolB2e-0859.7
NC_006510:1901954:191974719197471920577831Geobacillus kaustophilus HTA426, complete genomemyo-inositol catabolism protein4e-0858.5
NC_014650:2143033:214405921440592144883825Geobacillus sp. Y4.1MC1 chromosome, complete genomeKduI/IolB isomerase2e-0756.6
NC_008358:2257787:227722422772242278024801Hyphomonas neptunium ATCC 15444, complete genomemyo-inositol catabolism protein IolB2e-0755.8
NC_010551:1462827:148334814833481484166819Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceMyo-inositol catabolism IolB domain protein2e-0653.1
NC_006085:481231:503927503927504799873Propionibacterium acnes KPA171202, complete genomeputative myo-inositol catabolism protein IolB9e-0650.8
NC_014039:499233:521924521924522796873Propionibacterium acnes SK137 chromosome, complete genomeMyo-inositol catabolism protein9e-0650.8
NC_016516:463460:486157486157487029873Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeMyo-inositol catabolism protein1e-0550.8
NC_016511:472666:495361495361496233873Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeMyo-inositol catabolism protein1e-0550.8