Pre_GI: BLASTP Hits

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Query: NC_008261:2743942:2745410 Clostridium perfringens ATCC 13124, complete genome

Start: 2745410, End: 2746039, Length: 630

Host Lineage: Clostridium perfringens; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: The species type strain, originally isolated from a human gas gangrene patient. Causative agent of gas gangrene. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a causative agent of a wide spectrum of necrotic enterotoxicoses. It also causes such animal diseases as lamb dysentery, ovine enterotoxemia (struck), pulpy kidney disease in lambs and other enterotoxemias in lambs and calves. It is commonly found in the environment (soil, sewage) and in the animal and human gastrointestinal tract as a member of the normal microflora. It is a fast growing (generation time 8-10 min) anaerobic flesh-eater. Active fermentative growth is accompanied by profuse generation of molecular hydrogen and carbon dioxide. It is also oxygen tolerant which makes it an easy object to work with in laboratories. C. perfringens have been developed and the species became a model organism in clostridial genetic studies. Known isolates belong to five distinct types (A, B, C, D, and E) that are distinguished based on the specific extracellular toxins they produce. Known isolates belong to five distinct types (A, B, C, D, and E) that are distinguished based on the specific extracellular toxins they produce. All types produce the alpha toxin (phospholipase C). Type A strains that cause gas gangrene produce alpha toxin, theta (hemolysin), kappa (collagenase), mu (hyaluronidase), nu (DNAse) and neuraminidase which are all the enzymatic factors aiding the bacterium in invading and destruction of the host tissues. Type C strains produce alpha toxin, beta toxin and prefringolysin enteritis. In addition to alpha toxin, Type B strains produce beta toxin, types B and D produce the pore forming epsilon toxin and type E strains produce iota toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010337:1051425:106848410684841069044561Heliobacterium modesticaldum Ice1, complete genomestage ii sporulation protein r3e-33141
NC_014171:5107956:514529851452985146173876Bacillus thuringiensis BMB171 chromosome, complete genomestage II sporulation protein R3e-28124
NC_004722:5194000:523307352330735233948876Bacillus cereus ATCC 14579, complete genomeStage II sporulation protein R3e-28124
NC_011725:5201995:524117452411745242049876Bacillus cereus B4264 chromosome, complete genomestage II sporulation protein R4e-28124
NC_017208:5305969:530825253082525309115864Bacillus thuringiensis serovar chinensis CT-43 chromosome, completestage II sporulation protein R6e-28124
NC_011772:5158680:519502251950225195894873Bacillus cereus G9842, complete genomeputative stage II sporulation protein R1e-27123
NC_012472:5094009:509566650956665096541876Bacillus cereus 03BB102, complete genomeputative stage II sporulation protein R2e-27122
NC_008600:5046000:508341350834135084288876Bacillus thuringiensis str. Al Hakam, complete genomestage II sporulation protein R2e-27122
NC_007530:5033095:505473250547325055598867Bacillus anthracis str. 'Ames Ancestor', complete genomestage ii sporulation protein r, putative2e-27122
NC_003997:5032969:505460650546065055472867Bacillus anthracis str. Ames, complete genomestage II sporulation protein R, putative2e-27122
NC_005945:5053000:505594150559415056807867Bacillus anthracis str. Sterne, complete genomestage II sporulation protein R, putative2e-27122
NC_014335:5005267:500806050080605008905846Bacillus cereus biovar anthracis str. CI chromosome, completestage II sporulation protein R2e-27122
NC_012581:5052000:505726450572645058139876Bacillus anthracis str. CDC 684 chromosome, complete genomeputative stage II sporulation protein R2e-27122
NC_012659:5031827:505463250546325055507876Bacillus anthracis str. A0248, complete genomeputative stage II sporulation protein R2e-27122
NC_016779:5009320:504893950489395049814876Bacillus cereus F837/76 chromosome, complete genomeStage II sporulation protein required for processing of pro-sigma-E (SpoIIR)2e-27122
NC_011658:5087887:508839550883955089270876Bacillus cereus AH187 chromosome, complete genomeputative stage II sporulation protein R2e-27122
NC_011969:4993386:503254750325475033413867Bacillus cereus Q1 chromosome, complete genomestage II sporulation protein r2e-27122
NC_016771:5038435:504071850407185041584867Bacillus cereus NC7401, complete genomestage II sporulation protein R2e-27122
NC_017200:5149528:517319051731905174056867Bacillus thuringiensis serovar finitimus YBT-020 chromosome,stage II sporulation protein R2e-27122
NC_003909:4996783:503409150340915034957867Bacillus cereus ATCC 10987, complete genomestage II sporulation protein R, putative3e-27121
NC_005957:5037499:506040150604015061276876Bacillus thuringiensis serovar konkukian str. 97-27, completestage II sporulation protein R3e-27121
NC_011773:5091609:511441751144175115292876Bacillus cereus AH820 chromosome, complete genomeputative stage II sporulation protein R3e-27121
NC_006274:5122500:512489451248945125757864Bacillus cereus E33L, complete genomestage II sporulation protein R3e-27121
NC_014829:4392799:440764244076424408292651Bacillus cellulosilyticus DSM 2522 chromosome, complete genomestage II sporulation protein R2e-26119
NC_010184:5085977:508826050882605089120861Bacillus weihenstephanensis KBAB4, complete genomeSporulation stage II protein R2e-26119
NC_009674:3903893:390555439055543906435882Bacillus cytotoxicus NVH 391-98 chromosome, complete genomesporulation stage II protein R3e-26118
NC_014483:4891100:490039049003904901082693Paenibacillus polymyxa E681 chromosome, complete genomeStage II sporulation protein R4e-26117
NC_016641:1006662:102180310218031022498696Paenibacillus terrae HPL-003 chromosome, complete genomestage II sporulation protein R4e-26117
NC_014622:5251000:525956252595625260254693Paenibacillus polymyxa SC2 chromosome, complete genomestage II sporulation protein r6e-25114
NC_018704:2149229:215743921574392158026588Amphibacillus xylanus NBRC 15112, complete genomestage II sporulation protein R5e-24110