Pre_GI: BLASTP Hits

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Query: NC_008260:2442000:2452364 Alcanivorax borkumensis SK2, complete genome

Start: 2452364, End: 2453386, Length: 1023

Host Lineage: Alcanivorax borkumensis; Alcanivorax; Alcanivoracaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: This bacterium was isolated from a seawater sediment sample in the North Sea. The species is able to use Mihagol-S (C14,15-n-alkanes) as a principal carbon source. Using n-alkanes as a sole carbon source causes the strains to produce extracellular and membrane-bound surface-active glucose lipids. Phenotypic analysis showed a restricted nutritional profile, high halotolerance, the absence of fermentative metabolism, and a low G+C content. This, in combination with a 16S phylogenetic study, allowed the placing of this organism into a new genus.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014166:1179335:1189541118954111905541014Arcobacter nitrofigilis DSM 7299 chromosome, complete genomefamily 7 extracellular solute-binding protein8e-35147
NC_019978:2532640:2546495254649525475501056Halobacteroides halobius DSM 5150, complete genometripartite ATP-independent periplasmic transporter solute receptor, DctP family5e-30132
NC_015565:1511426:1528392152839215294141023Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeTRAP dicarboxylate transporter subunit DctP1e-28127
NC_007503:1111457:1159123115912311601901068Carboxydothermus hydrogenoformans Z-2901, complete genomeTRAP dicarboxylate transporter, DctP subunit1e-23110
NC_020911:3046916:306024730602473061245999Octadecabacter antarcticus 307, complete genomeTRAP transporter periplasmatic solute-binding protein DctP1e-23110
NC_014206:1618988:1621954162195416230121059Geobacillus sp. C56-T3 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctP3e-21102
NC_016048:308342:3402363402363412941059Oscillibacter valericigenes Sjm18-20, complete genomeputative transporter7e-21101
NC_006510:1995916:2015861201586120168891029Geobacillus kaustophilus HTA426, complete genomeC4-dicarboxylate transport system (C4-dicarboxylate-binding protein)1e-20100
NC_017190:424000:4410484410484421001053Bacillus amyloliquefaciens LL3 chromosome, complete genomeC4-dicarboxylate-binding protein1e-1997.4
NC_017188:419000:4363154363154373671053Bacillus amyloliquefaciens TA208 chromosome, complete genomeDctB1e-1997.4
NC_014011:1354261:1371285137128513723221038Aminobacterium colombiense DSM 12261 chromosome, complete genomeExtracellular solute-binding protein, family 71e-1894.4
NC_017191:425000:4423454423454433971053Bacillus amyloliquefaciens XH7 chromosome, complete genomeC4-dicarboxylate binding protein1e-1894
NC_016593:762216:7896097896097906491041Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeTRAP dicarboxylate transporter subunit DctP3e-1789.7
NC_017249:7917586:7936988793698879380131026Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein5e-1789
NC_004463:2344128:2344128234412823451951068Bradyrhizobium japonicum USDA 110, complete genomeprobable ABC transporter substrate-binding protein5e-1789
NC_011992:1968258:1995100199510019961101011Acidovorax ebreus TPSY, complete genomeTRAP dicarboxylate transporter, DctP subunit6e-1788.6
NC_013223:2609697:263872826387282639726999Desulfohalobium retbaense DSM 5692, complete genomeTRAP dicarboxylate transporter, DctP subunit3e-1686.3
NC_011830:4951716:4951716495171649527471032Desulfitobacterium hafniense DCB-2, complete genomeTRAP dicarboxylate transporter, DctP subunit4e-1685.9
NC_009439:4404942:4427124442712444281251002Pseudomonas mendocina ymp, complete genomeTRAP dicarboxylate transporter, DctP subunit7e-1685.1
NC_012491:1293086:1294546129454612955951050Brevibacillus brevis NBRC 100599, complete genomeprobable C4-dicarboxylate ABC transporter substrate binding protein1e-1584.3
NC_010511:1351000:1355534135553413565561023Methylobacterium sp. 4-46 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctP1e-1584.3
NC_007963:2777066:2785741278574127867511011Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter, DctP subunit2e-1583.6
NC_007644:416000:4256164256164266231008Moorella thermoacetica ATCC 39073, complete genomeTRAP dicarboxylate transporter, DctP subunit2e-1583.6
NC_007963:3574000:358199235819923582966975Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter- DctP subunit4e-1582.4
NC_015914:2230076:225379622537962254788993Cyclobacterium marinum DSM 745 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctP8e-1581.6
NC_016641:2815974:2835933283593328369671035Paenibacillus terrae HPL-003 chromosome, complete genomeputative C4-dicarboxylate ABC transporter substrate binding protein9e-1581.3
NC_014206:1618988:1618988161898816200161029Geobacillus sp. C56-T3 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctP2e-1480.5
NC_014323:4355266:4372829437282943738631035Herbaspirillum seropedicae SmR1 chromosome, complete genomeTRAP-type C4-dicarboxylate transport system periplasmic protein2e-1480.1
NC_006582:4256915:425691542569154257904990Bacillus clausii KSM-K16, complete genomeC4-dicarboxylate transport system substrate-binding protein2e-1480.1
NC_014532:2664139:267512626751262676121996Halomonas elongata DSM 2581, complete genomeTRAP transporter substrate-binding protein3e-1479.7
NC_007778:3784104:380823938082393809237999Rhodopseudomonas palustris HaA2, complete genomeTRAP dicarboxylate transporter DctP subunit5e-1479
NC_009454:1389974:1396060139606013970881029Pelotomaculum thermopropionicum SI, complete genomeTRAP-type C4-dicarboxylate transport system, periplasmic component6e-1478.6
NC_016048:3856665:3866163386616338672241062Oscillibacter valericigenes Sjm18-20, complete genomeputative transporter2e-1377
NC_014364:4488875:4510905451090545119091005Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeTRAP dicarboxylate transporter, DctP subunit2e-1376.6
NC_009050:604950:627975627975628964990Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceTRAP dicarboxylate transporter, DctP subunit7e-1375.1
NC_017270:1755552:176774417677441768709966Vibrio cholerae LMA3984-4 chromosome chromosome I, completeTRAP-type transport system, periplasmic protein9e-1374.7
NC_013855:558831:5737265737265747661041Azospirillum sp. B510 plasmid pAB510a, complete sequenceTRAP dicarboxylate transporter1e-1274.3
NC_003911:1791878:1839928183992818409501023Silicibacter pomeroyi DSS-3, complete genomeTRAP dicarboxylate transporter, DctP subunit, putative1e-1273.9
NC_017187:325229:340255340255341247993Arcobacter butzleri ED-1, complete genomeC4-dicarboxylate-binding periplasmic protein1e-1273.9
NC_014551:442135:459159459159459965807Bacillus amyloliquefaciens DSM 7, complete genomeC4-dicarboxylate-binding protein dctB Flags: Precursor2e-1273.9
NC_015573:162000:1721951721951732321038Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctP2e-1273.2
NC_020210:661236:671267671267672223957Geobacillus sp. GHH01, complete genome2,3-diketo-L-gulonate-binding periplasmic protein3e-1273.2
NC_015152:2887414:2897742289774228987461005Spirochaeta sp. Buddy chromosome, complete genomeTRAP dicarboxylate transporter DctP subunit3e-1272.8
NC_014966:1668822:169116016911601692143984Vibrio vulnificus MO6-24/O chromosome II, complete sequenceTRAP-type C4-dicarboxylate transporter periplasmic protein4e-1272.4
NC_016901:3430401:3447508344750834485271020Shewanella baltica OS678 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctP5e-1272.4
NC_009997:3483157:3500296350029635013151020Shewanella baltica OS195, complete genomeTRAP dicarboxylate transporter, DctP subunit5e-1272.4
NC_009457:1444449:148209614820961483061966Vibrio cholerae O395 chromosome 2, complete sequenceC4-dicarboxylate-binding periplasmic protein6e-1272
NC_012578:1838470:187612618761261877091966Vibrio cholerae M66-2 chromosome I, complete sequenceC4-dicarboxylate-binding periplasmic protein6e-1272
NC_012582:2013515:201351520135152014480966Vibrio cholerae O395 chromosome chromosome I, complete sequenceC4-dicarboxylate-binding periplasmic protein6e-1272
NC_012668:1688500:171755017175501718515966Vibrio cholerae MJ-1236 chromosome 1, complete sequenceTRAP-type transport system periplasmic component6e-1272
NC_016445:1363831:140039314003931401358966Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeC4-dicarboxylate-binding periplasmic protein6e-1272
NC_015730:921735:921735921735922709975Roseobacter litoralis Och 149 chromosome, complete genomeputative TRAP transporter subunit DctP7e-1271.6
NC_020911:18500:362213622137201981Octadecabacter antarcticus 307, complete genomeTRAP transporter periplasmatic solute-binding protein DctP8e-1271.6
NC_011661:1807101:180894618089461809941996Dictyoglomus turgidum DSM 6724, complete genomeTRAP dicarboxylate transporter- DctP subunit9e-1271.2
NC_011894:3161289:3178584317858431796031020Methylobacterium nodulans ORS 2060, complete genomeTRAP dicarboxylate transporter, DctP subunit9e-1271.2
NC_014532:2989185:300087330008733001859987Halomonas elongata DSM 2581, complete genomeTRAP transporter substrate-binding protein9e-1271.2
NC_017082:3717939:3721549372154937225801032Bradyrhizobium sp. S23321, complete genomeputative TRAP-type C4-dicarboxylate transport system2e-1170.5
NC_014041:3197192:320316532031653204151987Zunongwangia profunda SM-A87 chromosome, complete genomeputative dicarboxylate-binding periplasmic protein4e-1169.3
NC_007963:1190847:121161812116181212556939Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter, DctP subunit6e-1168.6
NC_009778:4188000:422889942288994229882984Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-1168.6
NC_014328:1263139:1264910126491012670722163Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative C4-dicarboxylate transporter protein/chemotaxis domain-containing protein3e-1066.2
NC_010552:2454776:2473745247374524747761032Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceTRAP dicarboxylate transporter, DctP subunit3e-1066.2
NC_013740:2218215:2228533222853322295461014Acidaminococcus fermentans DSM 20731, complete genomeTRAP dicarboxylate transporter, DctP subunit5e-1065.5
NC_015589:2447132:2452948245294824539821035Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeTRAP dicarboxylate transporter DctP subunit8e-1064.7
NC_016513:1761830:176842317684231769415993Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeDctP protein1e-0964.3
NC_004193:3530000:3539179353917935402011023Oceanobacillus iheyensis HTE831, complete genomeC4-dicarboxylate transport system C4-dicarboxylate-binding protein4e-0962.8
NC_016642:1990684:200975720097572010731975Pseudovibrio sp. FO-BEG1 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctP5e-0962.4
NC_006155:1916426:195311219531121954104993Yersinia pseudotuberculosis IP 32953, complete genomeTRAP-T family C4-dicarboxylate transporter, periplasmic binding protein (DctP subunit)7e-0962
NC_010634:1916000:195309619530961954088993Yersinia pseudotuberculosis PB1/+, complete genomeTRAP dicarboxylate transporter, DctP subunit7e-0962
NC_016642:1913432:1936277193627719372961020Pseudovibrio sp. FO-BEG1 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctP7e-0962
NC_015519:1888917:1890773189077318917981026Tepidanaerobacter sp. Re1 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctP1e-0861.2
NC_015458:1692401:169891516989151699898984Pusillimonas sp. T7-7 chromosome, complete genomeTRAP dicarboxylate transporter, DctP subunit1e-0860.8
NC_020908:1920169:193008319300831931063981Octadecabacter arcticus 238, complete genomeTRAP transporter DctP subunit1e-0860.8
NC_009832:110239:1319071319071329201014Serratia proteamaculans 568, complete genomeTRAP dicarboxylate transporter, DctP subunit1e-0860.8
NC_015573:813000:8433328433328443841053Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomefamily 7 extracellular solute-binding protein3e-0859.7
NC_011892:352652:365576365576366562987Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeTRAP dicarboxylate transporter, DctP subunit6e-0858.9
NC_008392:666000:683207683207684193987Burkholderia cepacia AMMD chromosome 3, complete sequenceTRAP dicarboxylate transporter, DctP subunit1e-0757.8
NC_015224:1914833:192134819213481922325978Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative C4-dicarboxylate transporter,periplasmic protein2e-0757.4
NC_007509:1043602:104900310490031049989987Burkholderia sp. 383 chromosome 3, complete sequenceTRAP dicarboxylate transporter- DctP subunit2e-0757
NC_008209:695269:715745715745716740996Roseobacter denitrificans OCh 114, complete genomeC4-dicarboxylate-binding protein, putative2e-0757
NC_015145:92397:1200461200461210861041Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genometripartite ATP-independent periplasmic transporter solute receptor, DctP family3e-0756.6
NC_016629:3789554:3828241382824138292871047Desulfovibrio africanus str. Walvis Bay chromosome, completeextracellular solute-binding protein3e-0653.1
NC_014364:3238374:324120132412013242199999Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeExtracellular solute-binding protein, family 73e-0652.8
NC_016048:3667890:3676205367620536772541050Oscillibacter valericigenes Sjm18-20, complete genomeputative transporter9e-0651.6