Pre_GI: BLASTP Hits

Some Help

Query: NC_008253:4735418:4773671 Escherichia coli 536, complete genome

Start: 4773671, End: 4773937, Length: 267

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013716:5201097:526916752691675269469303Citrobacter rodentium ICC168, complete genome5e-34142
NC_013361:3313284:331480333148033315450648Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein1e-32138
NC_009801:3374501:338814533881453388822678Escherichia coli E24377A, complete genomeIS66 family element, orf12e-32137
NC_009790:42112:442404424044917678Escherichia coli E24377A plasmid pETEC_74, complete sequenceIS66 family element, orf12e-32137
NC_013716:2476334:248499424849942485671678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A5e-32135
NC_013716:3708415:372254337225433723220678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A5e-32135
NC_013716:1138441:114611011461101146787678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A5e-32135
NC_013716:4824541:483553548355354836212678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A5e-32135
NC_013716:2764550:279093027909302791607678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A5e-32135
NC_013716:4306695:431035743103574311034678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A5e-32135
NC_013716:3327881:335750833575083358185678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A5e-32135
NC_013716:2764550:279183027918302792507678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A5e-32135
NC_007607:87000:901639016390831669Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceputative transposase5e-29126
NC_007385:157516:161897161897162565669Shigella sonnei Ss046 plasmid pSS_046, complete sequenceputative transposase2e-28124
NC_014839:68308:881018810188736636Pantoea sp. At-9b plasmid pPAT9B02, complete sequencetransposase IS3/IS911 family protein2e-22104
NC_014228:2270000:229328422932842293916633Xenorhabdus nematophila ATCC 19061, complete genomeputative transposase1e-1892
NC_010660:33109:373143731437610297Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence2e-0858.2
NC_004851:157675:169705169705170379675Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceISSfl4 ORF15e-0856.6
NC_002655:3919545:392180139218013922475675Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by ISEc85e-0856.6
NC_002695:3852233:385448938544893855163675Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein5e-0856.6
NC_011353:3956630:395888639588863959560675Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeISSfl4 ORF15e-0856.6
NC_013008:3911356:391361239136123914286675Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein5e-0856.6
AP010958:3627355:362961136296113630285675Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein6e-0856.2
AP010958:5090696:511675551167555117429675Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein6e-0856.2
NC_011601:3338888:334114433411443341818675Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransposase Orf1 of IS6836e-0856.2
NC_013353:3627355:362961136296113630285675Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein6e-0856.2
NC_013353:5090696:511675551167555117429675Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein6e-0856.2
NC_008258:401786:423776423776424450675Shigella flexneri 5 str. 8401, complete genomeISSfl4 ORF16e-0856.2
NC_008258:2045000:205991720599172060591675Shigella flexneri 5 str. 8401, complete genomeISSfl4 ORF16e-0856.2
NC_004337:367687:386125386125386799675Shigella flexneri 2a str. 301, complete genomeISSfl4 ORF16e-0856.2
NC_017319:155958:169634169634170308675Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceISSfl4 ORF16e-0856.2
NC_017328:385552:403989403989404663675Shigella flexneri 2002017 chromosome, complete genomeISSfl4 ORF16e-0856.2
NC_004337:3590323:385190438519043852578675Shigella flexneri 2a str. 301, complete genomeISSfl4 ORF16e-0856.2
NC_004851:157675:173438173438174112675Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceISSfl4 ORF16e-0856.2
NC_013941:3676146:367840236784023679076675Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeISSfl3 OrfA5e-0856.2
NC_007607:87000:116076116076116663588Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceISSfl4 ORF17e-0752.8
NC_017319:155958:173413173413174042630Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceISSfl4 ORF17e-0752.8