Pre_GI: BLASTP Hits

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Query: NC_008253:334467:348513 Escherichia coli 536, complete genome

Start: 348513, End: 349823, Length: 1311

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013361:5319497:5324994532499453263281335Escherichia coli O26:H11 str. 11368 chromosome, complete genomelysine/cadaverine antiporter9e-146516
CP002797:4411763:4434911443491144362451335Escherichia coli NA114, complete genomeLysine/cadaverine antiporter membrane protein CadB9e-146516
NC_010468:4252940:4274436427443642757701335Escherichia coli ATCC 8739, complete genomearginine/ornithine antiporter9e-146516
NC_014965:997344:1035756103575610370931338Vibrio vulnificus MO6-24/O chromosome I, complete sequencelysine/cadaverine antiporter membrane protein CadB9e-140497
NC_004459:2025436:2050577205057720519141338Vibrio vulnificus CMCP6 chromosome I, complete sequenceCadaverine/lysine antiporter9e-140497
NC_004741:4364235:4383674438367443847261053Shigella flexneri 2a str. 2457T, complete genome7e-125447
NC_010067:3247169:3268853326885332701901338Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-64246
NC_021066:4177217:4184900418490041862521353Raoultella ornithinolytica B6, complete genomeputative cationic amino acid permease7e-51201
NC_016614:1543333:1562996156299615643391344Vibrio sp. EJY3 chromosome 2, complete sequenceputrescine transporter3e-42173
NC_013508:275081:2913392913392926341296Edwardsiella tarda EIB202, complete genomeputrescine transport protein2e-39163
NC_017986:5867782:5881998588199858833381341Pseudomonas putida ND6 chromosome, complete genomeputrescine transporter5e-39162
NC_009512:2782000:2793078279307827944181341Pseudomonas putida F1, complete genomeamino acid permease-associated region5e-39162
NC_015424:4251369:4259132425913242604661335Aeromonas veronii B565 chromosome, complete genomeamino acid permease superfamily3e-37156
NC_016614:1543333:1565362156536215666991338Vibrio sp. EJY3 chromosome 2, complete sequenceamino acid transporter permease5e-35149
NC_020063:2785652:2795382279538227967071326Enterobacteriaceae bacterium strain FGI 57, complete genomeputrescine:ornithine antiporter, APA family5e-33142
NC_010793:721944:7407807407807420631284Orientia tsutsugamushi str. Ikeda, complete genomeamino acid transporter2e-31137
NC_012779:305969:312154312154313143990Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-28127
NC_003366:64908:7853478534798561323Clostridium perfringens str. 13, complete genomeprobable integral membrane transport protein8e-27121
NC_020829:5174354:5224533522453352259811449Pseudomonas denitrificans ATCC 13867, complete genomearginine/ornithine antiporter4e-1893.2
NC_017292:834749:8367278367278381871461Chlamydophila psittaci 02DC15 chromosome, complete genomearginine/ornithine antiporter2e-1687.4
NC_017291:829577:8339408339408354001461Chlamydophila psittaci C19/98 chromosome, complete genomeamino acid permease2e-1687.4
NC_017289:834781:8367598367598382191461Chlamydophila psittaci 01DC11 chromosome, complete genomearginine/ornithine antiporter2e-1687.4
NC_015470:831863:8362268362268376861461Chlamydophila psittaci 6BC chromosome, complete genomearginine/ornithine antiporter2e-1687.4
NC_016641:5808113:5834570583457058359851416Paenibacillus terrae HPL-003 chromosome, complete genomearginine/ornithine antiporter2e-1687.4
NC_015410:2258800:2258800225880022602271428Pseudomonas mendocina NK-01 chromosome, complete genomearginine/ornithine antiporter8e-1685.1
NC_021066:4177217:418768141876814188283603Raoultella ornithinolytica B6, complete genomeputative cationic amino acid permease7e-1479
NC_015391:2059191:2059191205919120606181428Carnobacterium sp. 17-4 chromosome, complete genomearginine/ornithine antiporter7e-1272.4
NC_009348:2034500:2038628203862820400641437Aeromonas salmonicida subsp. salmonicida A449, complete genomearginine/ornithine antiporter8e-1272
NC_014328:4387303:4421376442137644227881413Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative amino acid permease1e-1171.6
NC_012815:1465670:1479713147971314812481536Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeputative arginine/ornithine antiporter6e-1169.3
NC_012814:1465738:1479781147978114813161536Bifidobacterium animalis subsp. lactis Bl-04, complete genomeputative arginine/ornithine antiporter6e-1169.3
NC_004431:4270305:4284198428419842856971500Escherichia coli CFT073, complete genomePutative amino acid antiporter1e-1068.2
NC_008563:4739333:4762066476206647635651500Escherichia coli APEC O1, complete genomeputative amino acid antiporter1e-1068.2
NC_014328:1739578:1741468174146817428411374Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative aminoacid permease2e-1067.4
NC_021064:1705961:1716405171640517178861482Propionibacterium avidum 44067, complete genomeArginine/ornithine antiporter ArcD2e-1067.4
NC_015589:2941953:2943733294373329451211389Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeamino acid permease-associated protein3e-1066.6
NC_008463:4342119:4342119434211943435371419Pseudomonas aeruginosa UCBPP-PA14, complete genomeprobable amino acid permease8e-1065.5
NC_011770:4542183:4542183454218345436011419Pseudomonas aeruginosa LESB58, complete genomeputative amino acid permease9e-1065.1
NC_009076:3765441:3770092377009237714981407Burkholderia pseudomallei 1106a chromosome I, complete sequenceamino acid permease2e-0964.3
NC_006350:3865584:3871231387123138726371407Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative amino acid permease4e-0963.2
NC_007651:3560652:3566137356613735675431407Burkholderia thailandensis E264 chromosome I, complete sequenceamino acid permease4e-0963.2
NC_012590:1004816:1004816100481610063031488Corynebacterium aurimucosum ATCC 700975, complete genomeL-lysine transport protein7e-0962.4
NC_013961:1891000:1892495189249518938861392Erwinia amylovora, complete genomeputative APA family amino acid transporter6e-0962.4
NC_013971:1927510:1930022193002219314131392Erwinia amylovora ATCC 49946 chromosome, complete genomearginine/ornithine antiporter6e-0962.4
NC_015565:2508345:2510568251056825119531386Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete7e-0962
NC_011742:4655373:4672710467271046741791470Escherichia coli S88 chromosome, complete genomemembrane protein8e-0962
NC_008563:4739333:4758048475804847595171470Escherichia coli APEC O1, complete genomeputative antiporter8e-0962
NC_004431:4270305:4288246428824642897151470Escherichia coli CFT073, complete genomePutative antiporter8e-0962
NC_009725:2859630:2893361289336128947641404Bacillus amyloliquefaciens FZB42, complete genomeYtnA9e-0962
NC_017167:1648913:1744459174445917457541296Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1amino acid permease1e-0861.2
NC_012214:1974500:2006813200681320082071395Erwinia pyrifoliae Ep1/96, complete genomePutative arginine/ornithine antiporter YdgI2e-0860.5
NC_008800:1942000:1947359194735919488611503Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,amino acid permease5e-0859.3
NC_011663:1500772:1509093150909315104931401Shewanella baltica OS223 chromosome, complete genomeamino acid permease-associated protein1e-0758.5
NC_014121:4577324:4585647458564745870231377Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeArginine/ornithine antiporter3e-0756.6
NC_019908:1225690:1237862123786212391451284Brachyspira pilosicoli P43/6/78 chromosome, complete genomeamino acid permease5e-0756.2
NC_014330:2026193:2030006203000620313251320Brachyspira pilosicoli 95/1000 chromosome, complete genomeamino acid permease5e-0756.2
NC_018604:789575:7934247934247947071284Brachyspira pilosicoli WesB complete genomeamino acid permease6e-0755.8
NC_014618:2423661:2444986244498624464371452Enterobacter cloacae SCF1 chromosome, complete genomeamino acid permease8e-0755.5
NC_014507:2319842:2333086233308623345161431Methanoplanus petrolearius DSM 11571 chromosome, complete genomeamino acid permease-associated protein1e-0654.7
NC_017387:1110412:1112344111234411136781335Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomearginine/ornithine antiporter1e-0654.7
NC_015847:909938:9137289137289149811254Methanococcus maripaludis XI chromosome, complete genomeamino acid transporter2e-0654.3
NC_005791:837505:8413128413128425651254Methanococcus maripaludis S2, complete genomeamino acid/ polyamine transporter; family I2e-0654.3
NC_016791:1980844:2003057200305720044361380Clostridium sp. BNL1100 chromosome, complete genomegamma-aminobutyrate permease5e-0652.8
NC_016641:2618587:2633990263399026353691380Paenibacillus terrae HPL-003 chromosome, complete genometransporter5e-0652.8
NC_014150:3085013:3089069308906930903521284Brachyspira murdochii DSM 12563 chromosome, complete genomeamino acid permease-associated region5e-0652.8
NC_013131:10370765:1037232410372324103738381515Catenulispora acidiphila DSM 44928, complete genomeamino acid permease-associated region5e-0652.8