Pre_GI: BLASTP Hits

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Query: NC_008253:3122148:3156542 Escherichia coli 536, complete genome

Start: 3156542, End: 3156925, Length: 384

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004431:279868:286352286352286741390Escherichia coli CFT073, complete genomehypothetical protein9e-64241
NC_009800:349592:354971354971355354384Escherichia coli HS, complete genomehypothetical protein3e-61233
NC_013941:3676146:370511437051143705497384Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDNA-directed RNA polymerase, beta subunit/140 kD subunit4e-61232
NC_013353:3627355:365689236568923657275384Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein4e-61232
AP010958:3627355:365689236568923657275384Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein4e-61232
NC_004741:3041294:306838430683843068767384Shigella flexneri 2a str. 2457T, complete genomehypothetical protein9e-61231
NC_004337:3049118:307620530762053076588384Shigella flexneri 2a str. 301, complete genomehypothetical protein9e-61231
NC_017328:3088907:311600031160003116383384Shigella flexneri 2002017 chromosome, complete genomehypothetical protein9e-61231
NC_011751:3453683:350695035069503507333384Escherichia coli UMN026 chromosome, complete genomehypothetical protein3e-60229
NC_013716:5201097:523430252343025234691390Citrobacter rodentium ICC168, complete genomehypothetical protein1e-59227
AP010958:2455052:247127424712742471675402Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein1e-58224
NC_013353:2455052:247127424712742471675402Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-58224
NC_004431:3409389:348381234838123484267456Escherichia coli CFT073, complete genomehypothetical protein4e-58222
CP002797:2062006:208170220817022082103402Escherichia coli NA114, complete genomehypothetical protein1e-57221
NC_015663:549425:570825570825571217393Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein5e-36149
NC_009436:522649:541444541444541626183Enterobacter sp. 638, complete genomehypothetical protein1e-1168.9
NC_014618:4114004:413570341357034136107405Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein5e-1063.2
CP002797:2062006:208130420813042081714411Escherichia coli NA114, complete genomehypothetical protein4e-0753.5
NC_013421:1505176:151013715101371510514378Pectobacterium wasabiae WPP163, complete genomehypothetical protein7e-0752.8
NC_013353:2455052:247087924708792471286408Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein9e-0752.4
AP010958:2455052:247087924708792471286408Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein9e-0752.4