Pre_GI: BLASTP Hits

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Query: NC_008253:2965573:2981289 Escherichia coli 536, complete genome

Start: 2981289, End: 2983115, Length: 1827

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:3057444:3072950307295030747761827Escherichia coli S88 chromosome, complete genomeexonuclease V subunit alpha01243
NC_007946:3125577:3141071314107131428971827Escherichia coli UTI89, complete genomeexodeoxyribonuclease V alpha chain01243
NC_011745:3197584:3213407321340732152331827Escherichia coli ED1a chromosome, complete genomeexonuclease V subunit alpha01241
NC_007613:2699500:2713369271336927151951827Shigella boydii Sb227, complete genomeATP-dependent dsDNA/ssDNA exonuclease V subunit01236
NC_013361:3823347:3839171383917138409971827Escherichia coli O26:H11 str. 11368 chromosome, complete genomeexonuclease V subunit alpha01236
NC_010498:3023442:3039266303926630410921827Escherichia coli SMS-3-5, complete genomeexodeoxyribonuclease V, alpha subunit01233
NC_010694:3055403:3053556305355630554061851Erwinia tasmaniensis, complete genomeExodeoxyribonuclease V alpha chain0647
NC_007712:3382000:3399933339993334017921860Sodalis glossinidius str. 'morsitans', complete genomeexodeoxyribonuclease V alpha subunit8e-177620
NC_004459:1794540:1794540179454017966542115Vibrio vulnificus CMCP6 chromosome I, complete sequenceATP-dependent exoDNAse alpha subunit1e-136487
NC_018645:4945698:4951424495142449534392016Desulfobacula toluolica Tol2, complete genomeexodeoxyribonuclease V subunit alpha2e-112407
NC_018691:3496420:3496420349642034983661947Alcanivorax dieselolei B5 chromosome, complete genomeExodeoxyribonuclease V alpha chain1e-107390
NC_015740:3678342:3676216367621636783452130Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeexodeoxyribonuclease V subunit alpha8e-107388
NC_011206:2512667:2519649251964925216011953Acidithiobacillus ferrooxidans ATCC 53993, complete genomeexodeoxyribonuclease V, alpha subunit1e-100367
NC_008639:1573971:1590428159042815921731746Chlorobium phaeobacteroides DSM 266, complete genomeexodeoxyribonuclease V, alpha subunit5e-100365
NC_014500:2479814:2498288249828825003332046Dickeya dadantii 3937 chromosome, complete genomeexonuclease V (RecBCD complex), subunit alpha4e-99362
NC_010803:1436397:1452865145286514546311767Chlorobium limicola DSM 245, complete genomeexodeoxyribonuclease V, alpha subunit9e-99361
NC_012791:4794362:4818231481823148203572127Variovorax paradoxus S110 chromosome 1, complete genomeexodeoxyribonuclease V, alpha subunit8e-98358
NC_002663:564958:5936695936695956421974Pasteurella multocida subsp. multocida str. Pm70, complete genomeRecD1e-95351
NC_019940:2546500:2565827256582725677221896Thioflavicoccus mobilis 8321 chromosome, complete genomeexodeoxyribonuclease V subunit alpha2e-93343
NC_013851:3478153:3493536349353634957582223Allochromatium vinosum DSM 180 chromosome, complete genomeexodeoxyribonuclease V, alpha subunit5e-83308
NC_017259:480656:4806564806564824641809Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,exodeoxyribonuclease V 67 kDa polypeptide4e-79296
NC_004061:498483:5020345020345038421809Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomeexodeoxyribonuclease V 67 kDa polypeptide5e-77289
NC_014924:3334386:3352228335222833541021875Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeexodeoxyribonuclease V, alpha subunit8e-65248
NC_010688:4991410:5009134500913450113682235Xanthomonas campestris pv. campestris, complete genomeexodeoxyribonuclease V alpha chain2e-57223
NC_017271:4852351:4871059487105948733682310Xanthomonas campestris pv. raphani 756C chromosome, completeexodeoxyribonuclease V subunit alpha3e-56219
NC_003902:4989855:5006813500681350090502238Xanthomonas campestris pv. campestris str. ATCC 33913, completeexodeoxyribonuclease V alpha chain8e-54212
NC_007086:5064053:5079498507949850817352238Xanthomonas campestris pv. campestris str. 8004, complete genomeexodeoxyribonuclease V alpha chain8e-54212
NC_009481:1365000:1385306138530613869191614Synechococcus sp. WH 7803 chromosome, complete genomeexodeoxyribonuclease V subunit alpha9e-47188
NC_011027:817311:8179938179938201942202Chlorobaculum parvum NCIB 8327, complete genomehelicase, RecD/TraA family1e-42175
NC_010125:2884762:2896416289641628986022187Gluconacetobacter diazotrophicus PAl 5, complete genomeputative exodeoxyribonuclease6e-40166
NC_011365:1103927:1116217111621711184032187Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomehelicase, RecD/TraA family3e-39163
NC_010125:955863:9835099835099856952187Gluconacetobacter diazotrophicus PAl 5, complete genomeputative exodeoxyribonuclease V alpha chain8e-39162
NC_015713:2453409:2463825246382524652491425Simkania negevensis Z chromosome gsn.131, complete genomeexodeoxyribonuclease V subunit alpha1e-38161
NC_011757:5693584:5700531570053157027832253Methylobacterium chloromethanicum CM4, complete genomehelicase, RecD/TraA family4e-37156
NC_010172:5447189:83038303105042202Methylobacterium extorquens PA1, complete genomehelicase, RecD/TraA family4e-37156
NC_008609:1976403:2006218200621820084042187Pelobacter propionicus DSM 2379, complete genomehelicase, RecD/TraA family4e-36153
NC_013929:6526745:6536994653699465392552262Streptomyces scabiei 87.22 chromosome, complete genomeDNA-binding protein2e-35151
NC_003155:6444500:6456160645616064584362277Streptomyces avermitilis MA-4680, complete genomeexodeoxyribonuclease V3e-35150
NC_015573:776209:7777177777177798042088Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelicase, RecD/TraA family3e-35150
NC_010511:6067000:6080978608097860832122235Methylobacterium sp. 4-46 chromosome, complete genomerecombinase D4e-35150
NC_019697:1696000:1699454169945417017062253Chamaesiphon minutus PCC 6605, complete genomehelicase, putative, RecD/TraA family8e-35149
NC_010793:81219:8427684276864712196Orientia tsutsugamushi str. Ikeda, complete genomeexodeoxyribonuclease V alpha subunit1e-33144
NC_017285:671546:6896006896006917982199Chlamydophila pneumoniae LPCoLN chromosome, complete genomeRecD/TraA family helicase3e-32140
NC_002179:667182:6852326852326874302199Chlamydophila pneumoniae AR39, complete genomeexodeoxyribonuclease V, alpha subunit3e-32140
NC_009012:2661795:2675408267540826776482241Clostridium thermocellum ATCC 27405, complete genomehelicase, RecD/TraA family7e-31135
NC_009922:2721343:2731601273160127338472247Alkaliphilus oremlandii OhILAs, complete genomehelicase, RecD/TraA family3e-30133
NC_018664:239000:2433912433912456162226Clostridium acidurici 9a chromosome, complete genomeRecD/TraA family helicase RecD9e-30132
NC_017955:2494640:2540042254004225419881947Modestobacter marinus, complete genomeATP-dependent exoDNAse subunit alpha/helicase superfamily I protein7e-30132
NC_008261:2708929:2708929270892927111632235Clostridium perfringens ATCC 13124, complete genomehelicase, RecD/TraA family2e-29131
NC_003366:2494907:2494907249490724971412235Clostridium perfringens str. 13, complete genomeexodeoxyribonuclease V alpha subunit2e-29131
NC_020134:2772500:2784877278487727870902214Clostridium stercorarium subsp. stercorarium DSM 8532, completehelicase, RecD/TraA family2e-29130
NC_012796:4075583:4125454412545441276252172Desulfovibrio magneticus RS-1, complete genomehelicase RecD/TraA family protein3e-28127
NC_009633:760872:7692317692317714952265Alkaliphilus metalliredigens QYMF chromosome, complete genomerecombinase D5e-28126
NC_010337:2339056:2339823233982323419762154Heliobacterium modesticaldum Ice1, complete genomeexodeoxyribonuclease V, alpha chain, RecD2e-27124
NC_021182:4427468:4430951443095144331582208Clostridium pasteurianum BC1, complete genomehelicase, putative, RecD/TraA family2e-27124
NC_010723:485874:5040445040445062632220Clostridium botulinum E3 str. Alaska E43, complete genomehelicase, RecD/TraA family6e-27122
NC_014365:2037506:2040817204081720430452229Desulfarculus baarsii DSM 2075 chromosome, complete genomeATP-dependent RecD/TraA family DNA helicase1e-26122
NC_012796:2090000:2095549209554920977262178Desulfovibrio magneticus RS-1, complete genomehelicase RecD/TraA family protein1e-26121
NC_009495:183767:2021422021422043762235Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehelicase, RecD/TraA family6e-26119
NC_010814:1441327:1446527144652714501713645Geobacter lovleyi SZ, complete genomeExodeoxyribonuclease V1e-24115
NC_006448:1568000:1576578157657815790822505Streptococcus thermophilus LMG 18311, complete genomeexodeoxyribonuclease V6e-24112
NC_011772:4321117:4336135433613543384712337Bacillus cereus G9842, complete genomeputative helicase1e-23112
NC_014117:442616:4932384932384955112274Burkholderia sp. CCGE1002 chromosome chromosome 1, completeAAA ATPase1e-23112
NC_006449:1572000:1580139158013915826432505Streptococcus thermophilus CNRZ1066, complete genomeexodeoxyribonuclease V2e-23111
NC_011658:4171237:4188885418888541912212337Bacillus cereus AH187 chromosome, complete genomeputative helicase2e-23111
NC_011969:4065460:4084245408424540865812337Bacillus cereus Q1 chromosome, complete genomeexodeoxyribonuclease v, alpha subunit2e-23111
NC_010803:1436397:145115714511571451498342Chlorobium limicola DSM 245, complete genome1e-23111
NC_007530:4176462:4198106419810642004182313Bacillus anthracis str. 'Ames Ancestor', complete genomehelicase, putative4e-23110
NC_014833:2988814:2995209299520929974672259Ruminococcus albus 7 chromosome, complete genomehelicase, RecD/TraA family8e-23109
NC_014394:2577949:2590285259028525926032319Gallionella capsiferriformans ES-2 chromosome, complete genomeAAA ATPase5e-23109
NC_005957:4169610:4187265418726541896012337Bacillus thuringiensis serovar konkukian str. 97-27, completeexodeoxyribonuclease V, alpha subunit5e-23109
NC_014335:4113154:4129812412981241321482337Bacillus cereus biovar anthracis str. CI chromosome, completeRecD/TraA family helicase5e-23109
NC_012925:191501:2111252111252136142490Streptococcus suis P1/7, complete genomehypothetical protein2e-22108
NC_017200:4191963:4208883420888342112192337Bacillus thuringiensis serovar finitimus YBT-020 chromosome,exodeoxyribonuclease V subunit alpha2e-22107
NC_008554:2308500:2328598232859823307962199Syntrophobacter fumaroxidans MPOB, complete genomehelicase, RecD/TraA family1e-21105
NC_014365:2037506:2059009205900920611712163Desulfarculus baarsii DSM 2075 chromosome, complete genomehelicase, RecD/TraA family1e-21105
NC_010184:4219257:4234557423455742368932337Bacillus weihenstephanensis KBAB4, complete genomehelicase, RecD/TraA family8e-22105
NC_008740:2563278:2574464257446425767072244Marinobacter aquaeolei VT8, complete genomeAAA ATPase1e-20102
NC_015562:1413264:1422784142278414260893306Methanotorris igneus Kol 5 chromosome, complete genomeexodeoxyribonuclease V4e-20100
NC_014370:885937:9236959236959272943600Prevotella melaninogenica ATCC 25845 chromosome chromosome I,hypothetical protein5e-1893.2
NC_008435:2658986:2722151272215127243102160Rhodopseudomonas palustris BisA53, complete genomehypothetical protein2e-1584.7
NC_015725:926824:9456689456689479382271Mycoplasma bovis Hubei-1 chromosome, complete genomeexodeoxyribonuclease V subunit alpha3e-1480.9
NC_016626:1751159:1751159175115917542153057Burkholderia sp. YI23 plasmid byi_1p, complete sequenceputative traC, type IV secretion system4e-0963.9
NC_008577:3485878:3495433349543334975982166Shewanella sp. ANA-3 chromosome 1, complete sequenceAAA ATPase4e-0963.5
NC_011663:674069:6824066824066845592154Shewanella baltica OS223 chromosome, complete genomeATPase AAA9e-0962.4
NC_009665:639914:6482456482456503982154Shewanella baltica OS185 chromosome, complete genomeATPase AAA9e-0962.4
NC_016048:522637:5316525316525329381287Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein1e-0862.4
NC_010572:8408500:8428943842894384328543912Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative exodeoxyribonuclease-like protein2e-0861.2
NC_010572:82000:1130761130761169873912Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative exodeoxyribonuclease-like protein2e-0861.2
NC_003910:187630:2001942001942025602367Colwellia psychrerythraea 34H, complete genomeputative helicase2e-0861.2
NC_015377:34445:5672856728596222895Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequenceTrwC protein3e-0757.4
NC_007796:1731500:1731871173187117356983828Methanospirillum hungatei JF-1, complete genomehypothetical protein1e-0655.5
NC_011891:1225000:1242880124288012456602781Anaeromyxobacter dehalogenans 2CP-1, complete genomeconjugative relaxase domain protein6e-0653.1