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Query: NC_008228:2450700 Pseudoalteromonas atlantica T6c, complete genome

Start: 2450700, End: 2469539, Length: 18840

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015554:16536141653614167632322710Alteromonas sp. SN2 chromosome, complete genome2e-1591.7BLASTN svgBLASTP svg
NC_009997:25855882585588260380118214Shewanella baltica OS195, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009783:23069532306953232578818836Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_009348:2125698*2125698216701441317Aeromonas salmonicida subsp. salmonicida A449, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_004459:111690216902Vibrio vulnificus CMCP6 chromosome I, complete sequence6e-1073.8BLASTN svgBLASTP svg