Pre_GI: BLASTN Hits

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Query: NC_008228:1404126 Pseudoalteromonas atlantica T6c, complete genome

Start: 1404126, End: 1436132, Length: 32007

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015497:37395563739556376829828743Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome01231BLASTN svgBLASTP svg
NC_018679:31973473197347322261025264Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, complete2e-26129BLASTN svgBLASTP svg
NC_015554:81750081750085163434135Alteromonas sp. SN2 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg