Pre_GI: BLASTP Hits

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Query: NC_008228:816000:823247 Pseudoalteromonas atlantica T6c, complete genome

Start: 823247, End: 824323, Length: 1077

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016641:5808113:5813444581344458145321089Paenibacillus terrae HPL-003 chromosome, complete genomeputative type II restriction enzyme NmeDIP9e-94343
NC_011741:4570498:4578333457833345794091077Escherichia coli IAI1 chromosome, complete genomeputative type II restriction enzyme NmeDIP3e-82305
CU928160:4570498:4578333457833345794091077Escherichia coli IAI1 chromosome, complete genomeputative type II restriction enzyme NmeDIP3e-82305
NC_008536:2079052:210020321002032101099897Solibacter usitatus Ellin6076, complete genomeType II site-specific deoxyribonuclease6e-68258
NC_015422:3513689:3521840352184035231021263Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein2e-1687.4
NC_009720:5079048:5086145508614550874611317Xanthobacter autotrophicus Py2, complete genomehypothetical protein1e-1274.3
NC_016589:2824164:2862711286271128639701260Burkholderia sp. YI23 chromosome 1, complete sequencehypothetical protein1e-1274.3
NC_015671:139892:1423021423021436181317Cellvibrio gilvus ATCC 13127 chromosome, complete genomehypothetical protein4e-1272.8
NC_010682:1913941:1924488192448819258101323Ralstonia pickettii 12J chromosome 1, complete sequencehypothetical protein2e-1067
NC_013158:1686239:1707075170707517081211047Halorhabdus utahensis DSM 12940, complete genomehypothetical protein1e-0964.3
NC_007908:4677856:4683276468327646845501275Rhodoferax ferrireducens T118, complete genomehypothetical protein2e-0757
NC_016616:1091606:1096602109660210978581257Dechlorosoma suillum PS chromosome, complete genomehypothetical protein3e-0756.2
NC_013731:11605:1823018230194801251Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequencehypothetical protein7e-0755.1
NC_009441:3597020:3644945364494536461891245Flavobacterium johnsoniae UW101 chromosome, complete genomehypothetical protein4e-0652.8