Pre_GI: BLASTP Hits

Some Help

Query: NC_008228:4915500:4918214 Pseudoalteromonas atlantica T6c, complete genome

Start: 4918214, End: 4918546, Length: 333

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002939:1021297:1024618102461810259101293Geobacter sulfurreducens PCA, complete genomeGGDEF domain protein7e-1269.3
NC_007907:5428247:5449351544935154505831233Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1167.8
NC_013939:724469:726012726012726911900Deferribacter desulfuricans SSM1, complete genomesignal transduction response regulator2e-1167.8
NC_008700:3514745:3535999353599935376721674Shewanella amazonensis SB2B, complete genomeputative diguanylate cyclase (GGDEF domain protein)4e-1167
NC_013194:3861409:3865790386579038673821593Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completediguanylate cyclase5e-1166.6
NC_012108:1324885:1331589133158913329111323Desulfobacterium autotrophicum HRM2, complete genometwo domain sensory box histidine kinase (PAS/PAC domain/GGDEF domain protein)5e-1166.2
NC_019902:97987:1175791175791186821104Thioalkalivibrio nitratireducens DSM 14787, complete genomeresponse regulator protein with GGDEF domain6e-1166.2
NC_018607:1251357:126999912699991270826828Brachyspira pilosicoli B2904 chromosome, complete genomeGGDEF domain-containing protein8e-1165.9
NC_018604:1489567:150879215087921509616825Brachyspira pilosicoli WesB complete genomeputative GGDEF domain-containing protein8e-1165.9
NC_019908:700000:702570702570703394825Brachyspira pilosicoli P43/6/78 chromosome, complete genomeGGDEF domain-containing protein8e-1165.9
NC_014330:2520906:253729925372992538123825Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative GGDEF domain-containing protein8e-1165.9
NC_008740:2905990:293247529324752933425951Marinobacter aquaeolei VT8, complete genomediguanylate cyclase8e-1165.9
NC_017192:1028866:1031462103146210327571296Arcobacter sp. L, complete genomeputative diguanylate cyclase1e-1065.1
NC_011891:2607812:2633460263346026357542295Anaeromyxobacter dehalogenans 2CP-1, complete genomediguanylate cyclase1e-1065.1
NC_010814:1336943:135126913512691351982714Geobacter lovleyi SZ, complete genomediguanylate cyclase1e-1065.1
NC_011145:2543321:2569474256947425717682295Anaeromyxobacter sp. K, complete genomediguanylate cyclase1e-1065.1
NC_014844:2828370:2837353283735328387261374Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomediguanylate cyclase1e-1065.1
NC_017506:2504746:250701425070142507967954Marinobacter adhaerens HP15 chromosome, complete genomesensory box/GGDEF family protein2e-1064.7
NC_007946:1073135:1079368107936810808581491Escherichia coli UTI89, complete genomehypothetical protein YcdT2e-1064.7
NC_004431:1119700:1125933112593311274231491Escherichia coli CFT073, complete genomeHypothetical protein ycdT2e-1064.7
NC_015424:3277292:3298977329897733005151539Aeromonas veronii B565 chromosome, complete genomesensor histidine kinase2e-1064.7
NC_007778:2875973:2880002288000228810541053Rhodopseudomonas palustris HaA2, complete genomediguanylate cyclase2e-1064.3
NC_014328:2990790:3025875302587530270111137Clostridium ljungdahlii ATCC 49587 chromosome, complete genomemembrane associated GGDEF domain-containing protein2e-1064.3
NC_010730:1519458:1524413152441315256481236Sulfurihydrogenibium sp. YO3AOP1, complete genomediguanylate cyclase2e-1064.3
NC_008258:1076922:108659410865941086932339Shigella flexneri 5 str. 8401, complete genomehypothetical protein3e-1063.9
NC_002978:200878:2008782008782022601383Wolbachia endosymbiont of Drosophila melanogaster, complete genomeresponse regulator/GGDEF domain protein3e-1063.9
NC_008027:2331617:2356219235621923576251407Pseudomonas entomophila L48, complete genomediguanylate cyclase (GGDEF) domain3e-1063.9
NC_010468:2809125:2815497281549728168551359Escherichia coli ATCC 8739, complete genomediguanylate cyclase4e-1063.5
NC_012796:4693500:4719606471960647220652460Desulfovibrio magneticus RS-1, complete genomeGGDEF domain protein4e-1063.5
NC_014654:221707:230843230843231793951Halanaerobium sp. 'sapolanicus' chromosome, complete genomediguanylate cyclase4e-1063.5
AC_000091:1083798:1093298109329810946561359Escherichia coli W3110 DNA, complete genomepredicted diguanylate cyclase4e-1063.5
NC_012660:4734363:474847547484754749422948Pseudomonas fluorescens SBW25 chromosome, complete genomeputative GGDEF/GAF domain sensory box protein4e-1063.5
NC_000913:1087062:1092099109209910934571359Escherichia coli K12, complete genomepredicted diguanylate cyclase4e-1063.2
NC_010501:3448389:3474392347439234754291038Pseudomonas putida W619, complete genomediguanylate cyclase with GAF sensor6e-1062.8
NC_014634:28690:460384603846904867Ilyobacter polytropus DSM 2926 plasmid pILYOP02, complete sequencediguanylate cyclase6e-1062.8
NC_016633:289500:2971592971592987451587Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomediguanylate cyclase domain-containing protein7e-1062.8
NC_017186:1320186:1340240134024013414781239Amycolatopsis mediterranei S699 chromosome, complete genomediguanylate cyclase7e-1062.8
NC_014318:1320170:1340224134022413414621239Amycolatopsis mediterranei U32 chromosome, complete genomediguanylate cyclase7e-1062.8
NC_011353:1271335:1278033127803312794631431Escherichia coli O157:H7 str. EC4115 chromosome, complete genomediguanylate cyclase9e-1062.4
NC_002655:1413244:1419599141959914209571359Escherichia coli O157:H7 EDL933, complete genomehypothetical protein9e-1062.4
NC_002695:1329472:1335827133582713371851359Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein9e-1062.4
NC_013008:1271621:1278391127839112797491359Escherichia coli O157:H7 str. TW14359 chromosome, complete genomediguanylate cyclase9e-1062.4
NC_011753:3088952:310770631077063108656951Vibrio splendidus LGP32 chromosome 1, complete genomeputative sensory box/GGDEF family protein9e-1062.4
NC_006576:2423250:2432957243295724360703114Synechococcus elongatus PCC 6301, complete genomehypothetical protein8e-1062.4
NC_013959:2801557:2824036282403628260512016Sideroxydans lithotrophicus ES-1 chromosome, complete genomediguanylate cyclase with PAS/PAC sensor7e-1062.4
NC_007604:1875268:1880981188098118840943114Synechococcus elongatus PCC 7942, complete genomediguanylate cyclase (GGDEF domain) with PAS/PAC sensor7e-1062.4
NC_016026:997225:1031372103137210326311260Micavibrio aeruginosavorus ARL-13 chromosome, complete genomediguanylate cyclase domain-containing protein1e-0962
NC_012416:205925:2097252097252111011377Wolbachia sp. wRi, complete genomeresponse regulator PleD1e-0962
NC_012912:777592:7951677951677967771611Dickeya zeae Ech1591, complete genomediguanylate cyclase1e-0962
NC_007645:5160133:5160133516013351626792547Hahella chejuensis KCTC 2396, complete genomepredicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain2e-0961.6
NC_009138:1843998:1882878188287818844521575Herminiimonas arsenicoxydans, complete genomehypothetical protein1e-0961.6
NC_017507:155938:1792671792671813392073Marinobacter adhaerens HP15 plasmid pHP-187, complete sequenceprotein containing diguanylate cyclase, predicted domains1e-0961.6
NC_016614:822715:8286998286998300241326Vibrio sp. EJY3 chromosome 2, complete sequencediguanylate cyclase2e-0961.2
NC_014836:1052214:1054802105480210564511650Desulfurispirillum indicum S5 chromosome, complete genomediguanylate cyclase2e-0961.2
NC_009439:794498:8112638112638128851623Pseudomonas mendocina ymp, complete genomeresponse regulator receiver modulated diguanylate cyclase3e-0960.8
NC_007912:4661141:4678408467840846798381431Saccharophagus degradans 2-40, complete genomeresponse regulator receiver domain protein (CheY-like)3e-0960.8
NC_009663:1237336:1237767123776712389961230Sulfurovum sp. NBC37-1, complete genomesignal transduction response regulator3e-0960.8
NC_009511:2921448:2946988294698829481601173Sphingomonas wittichii RW1 chromosome, complete genomediguanylate cyclase2e-0960.8
NC_012559:1064821:1063772106377210648241053Laribacter hongkongensis HLHK9, complete genomeDiguanylate cyclase3e-0960.5
NC_012857:557911:5609075609075622531347Ralstonia pickettii 12D chromosome 2, complete genomediguanylate cyclase5e-0960.1
NC_010678:114000:1171131171131184591347Ralstonia pickettii 12J chromosome 2, complete sequencediguanylate cyclase5e-0960.1
NC_009925:3344894:3361646336164633645402895Acaryochloris marina MBIC11017, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC sensor5e-0960.1
NC_009943:1637582:1640362164036216414681107Candidatus Desulfococcus oleovorans Hxd3, complete genomediguanylate cyclase4e-0960.1
NC_014484:52311:837868378684682897Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein4e-0960.1
NC_010625:1551430:156081215608121561420609Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencediguanylate cyclase5e-0959.7
NC_015186:2197236:2235570223557022379242355Acidiphilium multivorum AIU301, complete genomeputative signaling protein6e-0959.7
NC_008702:2942246:2967068296706829688821815Azoarcus sp. BH72, complete genomeGGDEF family protein6e-0959.3
NC_011365:502620:5026205026205040381419Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomediguanylate cyclase7e-0959.3
NC_010125:2295500:2295802229580222972171416Gluconacetobacter diazotrophicus PAl 5, complete genomeputative signalling protein, GGDEF family7e-0959.3
NC_007498:2618131:2626318262631826275201203Pelobacter carbinolicus DSM 2380, complete genomeresponse regulator/FOG:GGDEF domain protein1e-0858.9
NC_009512:3618055:3629390362939036304271038Pseudomonas putida F1, complete genomediguanylate cyclase9e-0958.9
NC_018868:4174794:419154141915414192494954Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomediguanylate cyclase9e-0958.9
NC_008789:350650:3528153528153541791365Halorhodospira halophila SL1, complete genomediguanylate cyclase with PAS/PAC sensor9e-0958.9
NC_014166:1077121:1094283109428310954011119Arcobacter nitrofigilis DSM 7299 chromosome, complete genomediguanylate cyclase9e-0958.9
NC_008740:3259962:3278769327876932804841716Marinobacter aquaeolei VT8, complete genome7TM domain sensor diguanylate cyclase1e-0858.5
NC_011660:366000:3826573826573837301074Listeria monocytogenes HCC23 chromosome, complete genomeggdef domain protein1e-0858.5
NC_015572:3723498:3735252373525237362861035Methylomonas methanica MC09 chromosome, complete genomediguanylate cyclase1e-0858.5
NC_008262:1950205:195678719567871957656870Clostridium perfringens SM101, complete genomeresponse regulatory protein (sensory transduction system)1e-0858.5
NC_020291:2487575:2489410248941024911251716Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomehypothetical protein2e-0858.2
NC_014311:263963:3051833051833065861404Ralstonia solanacearum PSI07 chromosome, complete genomediguanylate kinase2e-0858.2
NC_015732:529201:5292015292015303431143Spirochaeta caldaria DSM 7334 chromosome, complete genomediguanylate cyclase2e-0858.2
NC_017506:3717261:3738121373812137398421722Marinobacter adhaerens HP15 chromosome, complete genomediguanylate cyclase1e-0858.2
NC_011186:819828:8415748415748430071434Vibrio fischeri MJ11 chromosome II, complete sequenceggdef domain protein1e-0858.2
NC_008702:2942246:2965210296521029670421833Azoarcus sp. BH72, complete genomeGGDEF family protein1e-0858.2
NC_009925:6253059:6265469626546962666531185Acaryochloris marina MBIC11017, complete genomediguanylate cyclase (GGDEF domain), putative1e-0858.2
NC_004757:427483:4781044781044795791476Nitrosomonas europaea ATCC 19718, complete genomeDomain of unknown function, DUF92e-0857.8
NC_014618:1452927:1459564145956414609401377Enterobacter cloacae SCF1 chromosome, complete genomediguanylate cyclase2e-0857.8
NC_007298:1759881:1785396178539617878582463Dechloromonas aromatica RCB, complete genomePAS:GGDEF2e-0857.8
NC_009253:2927802:2927802292780229290551254Desulfotomaculum reducens MI-1 chromosome, complete genomediguanylate cyclase2e-0857.8
NC_012115:961883:9652849652849664591176Nautilia profundicola AmH, complete genomeggdef domain protein2e-0857.8
NC_008751:2988235:299948929994893000421933Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomediguanylate cyclase with PAS/PAC sensor2e-0857.4
NC_020409:1407857:1444022144402214461062085Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative Diguanylate cyclase3e-0857.4
NC_014960:72737:8665186651898063156Anaerolinea thermophila UNI-1, complete genomehypothetical protein3e-0857.4
NC_007952:3037590:3052283305228330535121230Burkholderia xenovorans LB400 chromosome 2, complete sequencePutative diguanylate cyclase (GGDEF domain)4e-0857
NC_015185:485866:4890684890684907111644Desulfurobacterium thermolithotrophum DSM 11699 chromosome,diguanylate cyclase3e-0857
NC_011205:1345511:1362602136260213636631062Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853diguanylate cyclase3e-0857
NC_003366:2057656:206747820674782068377900Clostridium perfringens str. 13, complete genomehypothetical protein3e-0857
NC_017955:3670670:3679422367942236809391518Modestobacter marinus, complete genomediguanylate cyclase3e-0857
NC_011283:1901229:1922454192245419241331680Klebsiella pneumoniae 342 chromosome, complete genomediguanylate cyclase3e-0857
NC_006841:750000:7687587687587700771320Vibrio fischeri ES114 chromosome II, complete sequencehypothetical protein3e-0857
NC_015276:1426000:1442951144295114442311281Marinomonas mediterranea MMB-1 chromosome, complete genomediguanylate cyclase3e-0857
NC_012440:1080675:1080675108067510819671293Persephonella marina EX-H1, complete genomesignal transduction response regulator5e-0856.6
NC_013421:3237633:3240642324064232421141473Pectobacterium wasabiae WPP163, complete genomediguanylate cyclase5e-0856.6
NC_013851:3321853:3349476334947633505041029Allochromatium vinosum DSM 180 chromosome, complete genomediguanylate cyclase5e-0856.6
NC_013716:5141269:5141269514126951423331065Citrobacter rodentium ICC168, complete genomehypothetical protein5e-0856.6
NC_013173:1671288:1676285167628516772921008Desulfomicrobium baculatum DSM 4028, complete genomeresponse regulator receiver modulated diguanylate cyclase4e-0856.6
NC_012438:192065:2034542034542053701917Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomediguanylate cyclase/phosphodiesterase4e-0856.6
NC_016831:1734292:1749997174999717510581062Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein7e-0856.2
NC_014562:2871765:2889279288927928907001422Pantoea vagans C9-1 chromosome, complete genomeUncharacterized protein yneF6e-0856.2
NC_015731:990000:1007244100724410089561713Nitrosomonas sp. Is79A3 chromosome, complete genomediguanylate cyclase6e-0856.2
NC_020064:1150982:1162484116248411639201437Serratia marcescens FGI94, complete genomediguanylate cyclase (GGDEF) domain-containing protein6e-0856.2
NC_008786:3291700:3305661330566133074991839Verminephrobacter eiseniae EF01-2, complete genomediguanylate cyclase6e-0856.2
NC_016745:2785346:2814229281422928171082880Oceanimonas sp. GK1 chromosome, complete genomeputative periplasmic ligand-binding sensor protein6e-0856.2
NC_010694:436500:4547604547604563281569Erwinia tasmaniensis, complete genomehypothetical protein5e-0856.2
NC_012438:1211940:1225711122571112281912481Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeggdef domain protein8e-0855.8
NC_009254:442360:4590134590134608271815Burkholderia vietnamiensis G4 chromosome 3, complete sequencediguanylate cyclase with PAS/PAC sensor8e-0855.8
NC_006905:1961774:1980662198066219817921131Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein8e-0855.8
NC_012125:1897611:1910934191093419120641131Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein8e-0855.8
NC_006511:1063249:1076918107691810780481131Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein8e-0855.8
NC_013959:1555799:1567917156791715696291713Sideroxydans lithotrophicus ES-1 chromosome, complete genomeperiplasmic/7TM domain sensor diguanylate cyclase8e-0855.8
NC_011147:1057259:1070928107092810720581131Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein8e-0855.8
NC_009348:2034500:2047816204781620491141299Aeromonas salmonicida subsp. salmonicida A449, complete genomeGGDEF domain-containing protein7e-0855.8
NC_007109:1105251:1109198110919811105501353Rickettsia felis URRWXCal2, complete genomeRegulatory components of sensory transduction system7e-0855.8
NC_013894:1194458:1206419120641912077981380Thermocrinis albus DSM 14484 chromosome, complete genomediguanylate cyclase7e-0855.8
NC_014633:583858:587751587751588692942Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencediguanylate cyclase7e-0855.8
NC_009663:851143:8714898714898737562268Sulfurovum sp. NBC37-1, complete genomesignal transduction response regulator7e-0855.8
NC_010674:3362071:3362071336207133641582088Clostridium botulinum B str. Eklund 17B, complete genomeggdef domain protein1e-0755.5
NC_007925:3911323:391927339192733919956684Rhodopseudomonas palustris BisB18, complete genomediguanylate cyclase (GGDEF domain)1e-0755.5
NC_007519:64157:6660966609678441236Desulfovibrio alaskensis G20 chromosome, complete genomediguanylate cyclase1e-0755.5
NC_014829:4565467:4571843457184345745032661Bacillus cellulosilyticus DSM 2522 chromosome, complete genomediguanylate cyclase/phosphodiesterase9e-0855.5
NC_007777:2964500:2982679298267929844421764Frankia sp. CcI3, complete genomediguanylate cyclase (GGDEF domain)9e-0855.5
NC_011595:3015895:3038069303806930394901422Acinetobacter baumannii AB307-0294, complete genomehypothetical protein1e-0755.1
NC_016745:1548426:1551071155107115526421572Oceanimonas sp. GK1 chromosome, complete genomediguanylate cyclase1e-0755.1
NC_009254:700891:7070217070217085711551Burkholderia vietnamiensis G4 chromosome 3, complete sequencediguanylate cyclase1e-0755.1
NC_013943:124500:1383321383321409742643Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomePAS/PAC sensor-containing diguanylate cyclase1e-0755.1
NC_004547:1873390:1928679192867919300071329Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-0755.1
NC_015731:990000:100916310091631009963801Nitrosomonas sp. Is79A3 chromosome, complete genomediguanylate cyclase1e-0755.1
NC_015637:325561:340532340532341449918Vibrio anguillarum 775 chromosome chromosome II, complete sequencesensory transduction protein kinase1e-0755.1
NC_003198:1867456:1885617188561718867471131Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-0755.1
NC_004631:1091303:1094385109438510955151131Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-0755.1
NC_016832:1090274:1093356109335610944171062Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-0755.1
NC_015381:429940:4447814447814459651185Burkholderia gladioli BSR3 chromosome 1, complete sequenceDiguanylate cyclase1e-0755.1
NC_017098:840492:8616508616508631731524Spirochaeta africana DSM 8902 chromosome, complete genomediguanylate cyclase2e-0754.7
NC_007645:3434795:3444124344412434457431620Hahella chejuensis KCTC 2396, complete genomeResponse regulator containing a CheY-like receiver domain and a GGDEF domain2e-0754.7
NC_017095:269165:2875572875572890591503Fervidobacterium pennivorans DSM 9078 chromosome, complete genomediguanylate cyclase2e-0754.7
NC_003212:2293425:2296711229671122977841074Listeria innocua Clip11262, complete genomehypothetical protein2e-0754.7
NC_009092:3239500:3257518325751832590741557Shewanella loihica PV-4, complete genomediguanylate cyclase2e-0754.7
NC_014500:2479814:2496654249665424980361383Dickeya dadantii 3937 chromosome, complete genomeputative Heme-regulated two-component response regulator2e-0754.7
NC_010506:1893000:1902176190217619041041929Shewanella woodyi ATCC 51908, complete genomediguanylate cyclase2e-0754.7
NC_008576:3331825:333265633326563333318663Magnetococcus sp. MC-1, complete genomediguanylate cyclase2e-0754.7
NC_009254:745706:7667167667167682571542Burkholderia vietnamiensis G4 chromosome 3, complete sequencediguanylate cyclase2e-0754.7
NC_008702:2892605:2902117290211729032651149Azoarcus sp. BH72, complete genomeconserved hypothetical membrane protein2e-0754.7
NC_013889:1439326:1446291144629114473671077Thioalkalivibrio sp. K90mix chromosome, complete genome2e-0754.7
NC_009485:1604942:161446516144651614878414Bradyrhizobium sp. BTAi1 chromosome, complete genomehypothetical protein2e-0754.7
NC_009254:745706:7775837775837791061524Burkholderia vietnamiensis G4 chromosome 3, complete sequencediguanylate cyclase2e-0754.7
NC_013316:1225797:1240574124057412422921719Clostridium difficile R20291, complete genomeputative signaling protein2e-0754.3
NC_018868:1271742:1297249129724912995342286Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomediguanylate cyclase2e-0754.3
NC_012917:2971702:2986224298622429876391416Pectobacterium carotovorum subsp. carotovorum PC1, complete genomediguanylate cyclase2e-0754.3
NC_013524:392089:3920893920893943322244Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomediguanylate cyclase with PAS/PAC and GAF sensors2e-0754.3
NC_011126:163878:1834581834581857762319Hydrogenobaculum sp. Y04AAS1, complete genomediguanylate cyclase with PAS/PAC sensor3e-0754.3
NC_013315:1230214:1242957124295712446751719Clostridium difficile CD196 chromosome, complete genomesignaling protein2e-0754.3
NC_017179:1239991:1252735125273512544531719Clostridium difficile BI1, complete genomesignaling protein2e-0754.3
NC_012988:4387735:440459344045934405054462Methylobacterium extorquens DM4, complete genomediguanylate cyclase2e-0754.3
NC_007912:3828980:383299838329983833909912Saccharophagus degradans 2-40, complete genomeresponse regulator receiver domain protein (CheY-like)2e-0754.3
NC_008027:2331617:2347081234708123481271047Pseudomonas entomophila L48, complete genomediguanylate cyclase (GGDEF domain)2e-0754.3
NC_007650:2901751:290081929008192901754936Burkholderia thailandensis E264 chromosome II, complete sequenceGGDEF domain protein2e-0754.3
NC_012667:703852:7087997087997107271929Vibrio cholerae MJ-1236 chromosome 2, complete genomesensory box/GGDEF family protein2e-0754.3
NC_014166:2055984:2058444205844420597001257Arcobacter nitrofigilis DSM 7299 chromosome, complete genomediguanylate cyclase3e-0753.9
NC_012660:4734363:4750327475032747527892463Pseudomonas fluorescens SBW25 chromosome, complete genomeputative signaling-related membrane protein3e-0753.9
NC_014837:3633378:3636577363657736377911215Pantoea sp. At-9b chromosome, complete genomediguanylate cyclase3e-0753.9
NC_007907:1996194:2008825200882520104471623Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-0753.9
NC_013739:717352:7440707440707460221953Conexibacter woesei DSM 14684, complete genomediguanylate cyclase3e-0753.9
NC_011830:3081726:3093712309371230953161605Desulfitobacterium hafniense DCB-2, complete genomediguanylate cyclase3e-0753.9
NC_015733:3736104:3738086373808637394951410Pseudomonas putida S16 chromosome, complete genomediguanylate cyclase3e-0753.9
NC_014152:397177:413984413984414652669Thermincola sp. JR, complete genomediguanylate cyclase3e-0753.9
NC_012483:483425:5114635114635125661104Acidobacterium capsulatum ATCC 51196, complete genomeGGDEF domain protein3e-0753.9
NC_014121:398012:4109994109994122461248Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completediguanylate cyclase with PAS/PAC sensor3e-0753.9
NC_008563:1651270:166714816671481668044897Escherichia coli APEC O1, complete genomehypothetical protein4e-0753.5
NC_014259:3369000:3388179338817933895971419Acinetobacter sp. DR1 chromosome, complete genomeresponse regulator4e-0753.5
NC_014394:2228470:2236100223610022378361737Gallionella capsiferriformans ES-2 chromosome, complete genomediguanylate cyclase with PAS/PAC sensor4e-0753.5
NC_012912:2216749:2226407222640722285752169Dickeya zeae Ech1591, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)4e-0753.5
NC_012912:2998511:3000747300074730021591413Dickeya zeae Ech1591, complete genomediguanylate cyclase4e-0753.5
NC_013166:82986:1085441085441097251182Kangiella koreensis DSM 16069, complete genomediguanylate cyclase4e-0753.5
NC_007645:3227098:3240398324039832420651668Hahella chejuensis KCTC 2396, complete genomeResponse regulator containing a CheY-like receiver domain and a GGDEF domain3e-0753.5
NC_016627:3881000:3883492388349238850241533Clostridium clariflavum DSM 19732 chromosome, complete genomediguanylate cyclase domain-containing protein5e-0753.1
NC_014839:68308:8606286062877771716Pantoea sp. At-9b plasmid pPAT9B02, complete sequencediguanylate cyclase5e-0753.1
NC_008319:1376938:1399510139951014009761467Synechococcus sp. CC9311, complete genomeGGDEF domain protein5e-0753.1
NC_015161:758929:7839897839897856651677Deinococcus proteolyticus MRP chromosome, complete genomediguanylate cyclase5e-0753.1
NC_013421:1173051:1195964119596411975621599Pectobacterium wasabiae WPP163, complete genomediguanylate cyclase5e-0753.1
NC_009075:3113393:311339331133933114328936Burkholderia pseudomallei 668 chromosome II, complete sequencediguanylate cyclase5e-0753.1
NC_006351:3159630:315869831586983159633936Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein5e-0753.1
NC_006349:2311817:231088523108852311820936Burkholderia mallei ATCC 23344 chromosome 2, complete sequenceGGDEF domain protein5e-0753.1
NC_008784:1151305:115130511513051152240936Burkholderia mallei SAVP1 chromosome I, complete sequencediguanylate cyclase5e-0753.1
NC_007435:1825741:182480918248091825744936Burkholderia pseudomallei 1710b chromosome II, complete sequenceGGDEF domain protein5e-0753.1
NC_009943:1262000:1278372127837212795621191Candidatus Desulfococcus oleovorans Hxd3, complete genomediguanylate cyclase5e-0753.1
NC_013421:2004088:2008998200899820104101413Pectobacterium wasabiae WPP163, complete genomediguanylate cyclase5e-0753.1
NC_015222:1607757:162010516201051620905801Nitrosomonas sp. AL212 chromosome, complete genomediguanylate cyclase4e-0753.1
NC_010322:3315024:3315024331502433175672544Pseudomonas putida GB-1 chromosome, complete genomePAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase7e-0752.8
NC_007298:3271071:3292338329233832933781041Dechloromonas aromatica RCB, complete genomeGGDEF7e-0752.8
NC_017955:693303:7120727120727144202349Modestobacter marinus, complete genomediguanylate cyclase (GGDEF)7e-0752.8
NC_008740:220642:2243232243232266772355Marinobacter aquaeolei VT8, complete genomediguanylate cyclase with PAS/PAC sensor7e-0752.8
NC_013889:1439326:1448038144803814491801143Thioalkalivibrio sp. K90mix chromosome, complete genomediguanylate cyclase6e-0752.8
NC_014394:93344:1012361012361026001365Gallionella capsiferriformans ES-2 chromosome, complete genomediguanylate cyclase6e-0752.8
NC_009254:745706:776387776387777019633Burkholderia vietnamiensis G4 chromosome 3, complete sequencediguanylate cyclase1e-0652.4
NC_014121:3453815:3453815345381534571683354Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative sensor protein9e-0752.4
NC_012796:1049034:1093541109354110954151875Desulfovibrio magneticus RS-1, complete genomeputative signaling protein9e-0752.4
NC_012796:4075583:4148352414835241509132562Desulfovibrio magneticus RS-1, complete genomeputative signaling protein9e-0752.4
NC_015557:1333158:1354921135492113560241104Hydrogenobaculum sp. 3684 chromosome, complete genomediguanylate cyclase9e-0752.4
NC_020411:1333352:1355115135511513562181104Hydrogenobaculum sp. HO, complete genomediguanylate cyclase9e-0752.4
NC_008782:2062962:2082120208212020831241005Acidovorax sp. JS42, complete genomediguanylate cyclase9e-0752.4
NC_012880:3645304:366033636603363661274939Dickeya dadantii Ech703, complete genomeresponse regulator receiver modulated diguanylate cyclase8e-0752.4
NC_014960:115614:131018131018131962945Anaerolinea thermophila UNI-1, complete genomeputative signaling protein8e-0752.4
NC_012796:1049034:1061214106121410631031890Desulfovibrio magneticus RS-1, complete genomeputative signaling protein8e-0752.4
NC_008702:2039462:2061475206147520635472073Azoarcus sp. BH72, complete genomeconserved hypothetical signaling protein1e-0652
NC_010501:1286971:1292082129208212931671086Pseudomonas putida W619, complete genomediguanylate cyclase1e-0652
NC_012026:415447:4279314279314292981368Anaplasma marginale str. Florida, complete genomePutative two-component response regulator with GGDEF and receiver domains1e-0652
NC_011740:2737467:2740351274035127417691419Escherichia fergusonii ATCC 35469, complete genomehypothetical protein1e-0652
NC_012880:2425330:2438701243870124408572157Dickeya dadantii Ech703, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)1e-0652
NC_010424:697187:7245927245927260071416Candidatus Desulforudis audaxviator MP104C, complete genomediguanylate cyclase1e-0652
NC_014500:4883794:4892448489244848947692322Dickeya dadantii 3937 chromosome, complete genomesensory box protein1e-0652
NC_008321:3232000:3238765323876532403211557Shewanella sp. MR-4, complete genomediguanylate cyclase1e-0652
CU928160:1625535:163993816399381640828891Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein2e-0651.6
NC_016902:2361628:236306923630692363959891Escherichia coli KO11FL chromosome, complete genomediguanylate cyclase2e-0651.6
CP002185:1727493:174189617418961742786891Escherichia coli W, complete genomeconserved protein2e-0651.6
CP002516:2361628:236306923630692363959891Escherichia coli KO11, complete genomediguanylate cyclase2e-0651.6
NC_007520:407627:4287244287244303461623Thiomicrospira crunogena XCL-2, complete genomediguanylate cyclase (GGDEF domain) with PAS/PAC sensor2e-0651.6
NC_020063:2531643:253526025352602536156897Enterobacteriaceae bacterium strain FGI 57, complete genomediguanylate cyclase (GGDEF) domain-containing protein2e-0651.6
NC_012796:2757500:2775451277545127767131263Desulfovibrio magneticus RS-1, complete genomeresponse regulator receiver protein2e-0651.6
NC_019673:4687289:4704174470417447063092136Saccharothrix espanaensis DSM 44229 complete genomeputative diguanylate cyclase/phosphodiesterase with PAS/PAC sensor domain(s)2e-0651.6
NC_011415:1715644:173004717300471730937891Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-0651.6
NC_011741:1625535:163993816399381640828891Escherichia coli IAI1 chromosome, complete genomehypothetical protein2e-0651.6
NC_007626:3522265:3613896361389636184284533Magnetospirillum magneticum AMB-1, complete genomeHypothetical 1041 kDa protein in hypE 3'region1e-0651.6
NC_008577:4611431:4624559462455946257011143Shewanella sp. ANA-3 chromosome 1, complete sequencediguanylate cyclase1e-0651.6
NC_011979:1683964:1692822169282216948252004Geobacter sp. FRC-32, complete genomediguanylate cyclase with GAF sensor1e-0651.6
NC_007498:1072112:1091829109182910950203192Pelobacter carbinolicus DSM 2380, complete genomesensory box/FOG: EAL domain/GGDEF domain containing protein1e-0651.6
NC_002937:1915787:192944819294481930443996Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeGGDEF domain protein1e-0651.6
NC_007802:2026500:2036403203640320381121710Jannaschia sp. CCS1, complete genomediguanylate cyclase/phosphodiesterase1e-0651.6
NC_014219:2284000:2308453230845323100061554Bacillus selenitireducens MLS10 chromosome, complete genomediguanylate cyclase with GAF sensor1e-0651.6
NC_006138:2630338:2642868264286826448501983Desulfotalea psychrophila LSv54, complete genomehypothetical protein2e-0651.6
NC_012912:4737703:4747041474704147493562316Dickeya zeae Ech1591, complete genomediguanylate cyclase with PAS/PAC and GAF sensors2e-0651.2
NC_016112:562570:5643155643155663842070Methylomicrobium alcaliphilum chromosome, complete genomeresponse regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)2e-0651.2
NC_006576:217697:2299022299022326912790Synechococcus elongatus PCC 6301, complete genometwo-component response regulator2e-0651.2
NC_007604:1383192:1388109138810913908982790Synechococcus elongatus PCC 7942, complete genomeTwo-component response regulator2e-0651.2
NC_012796:3267569:3296206329620632988872682Desulfovibrio magneticus RS-1, complete genomeputative signaling protein2e-0651.2
NC_016751:1740265:1759470175947017611281659Marinitoga piezophila KA3 chromosome, complete genomediguanylate cyclase domain-containing protein2e-0651.2
NC_007963:1190847:1196871119687111985831713Chromohalobacter salexigens DSM 3043, complete genomediguanylate cyclase with PAS/PAC and GAF sensors2e-0651.2
NC_021066:601029:6216856216856232621578Raoultella ornithinolytica B6, complete genomediguanylate cyclase YedQ2e-0651.2
NC_017249:908500:9380779380779391261050Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-0651.2
NC_007404:2743877:2773375277337527750871713Thiobacillus denitrificans ATCC 25259, complete genomePutative diguanylate cyclase (GGDEF domain)2e-0651.2
NC_012483:1567253:1587454158745415885631110Acidobacterium capsulatum ATCC 51196, complete genomeGAF domain/GGDEF domain protein3e-0650.8
NC_016616:760145:7601457601457625712427Dechlorosoma suillum PS chromosome, complete genomediguanylate cyclase domain-containing protein3e-0650.8
NC_014152:421481:4312864312864323081023Thermincola sp. JR, complete genomediguanylate cyclase3e-0650.8
NC_015559:2434000:2450680245068024519331254Marinomonas posidonica IVIA-Po-181 chromosome, complete genomediguanylate cyclase3e-0650.8
NC_009937:4090404:4092572409257240938851314Azorhizobium caulinodans ORS 571, complete genomehypothetical conserved protein3e-0650.8
NC_008789:1393526:1415124141512414168031680Halorhodospira halophila SL1, complete genomediguanylate cyclase3e-0650.8
NC_010498:1615980:161903516190351619925891Escherichia coli SMS-3-5, complete genomediguanylate cyclase2e-0650.8
NC_010693:1:2182621826232951470Erwinia tasmaniensis plasmid pET46, complete sequencehypothetical protein2e-0650.8
NC_008313:2629281:2643743264374326450021260Ralstonia eutropha H16 chromosome 1, complete sequenceGGDEF domain protein3e-0650.4
NC_014121:3776902:3793829379382937952081380Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative diguanylate cyclase3e-0650.4
NC_014762:1334206:134169713416971342449753Sulfuricurvum kujiense DSM 16994 chromosome, complete genomediguanylate cyclase3e-0650.4
NC_016803:2612694:2636605263660526381011497Desulfovibrio desulfuricans ND132 chromosome, complete genomediguanylate cyclase3e-0650.4
NC_013889:1514799:1514799151479915162501452Thioalkalivibrio sp. K90mix chromosome, complete genomediguanylate cyclase with PAS/PAC and GAF sensors3e-0650.4
NC_008463:4342119:4365841436584143692033363Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein3e-0650.4
NC_007484:3035068:3037810303781030396001791Nitrosococcus oceani ATCC 19707, complete genomePAS sensor diguanylate cyclase/phophodiesterase3e-0650.4
NC_016816:2508204:2521288252128825227841497Pantoea ananatis LMG 5342, complete genomediguanylate cyclase3e-0650.4
NC_011770:4542183:4565798456579845691603363Pseudomonas aeruginosa LESB58, complete genomehypothetical protein3e-0650.4
NC_014733:1223359:1254227125422712568362610Methylovorus sp. MP688 chromosome, complete genomediguanylate cyclase/phosphodiesterase with pas/pac sensor(s)5e-0650.1
NC_013446:4511602:4522130452213045236951566Comamonas testosteroni CNB-2, complete genomediguanylate cyclase5e-0650.1
CP002516:2361628:2381339238133923827571419Escherichia coli KO11, complete genomediguanylate cyclase4e-0650.1
NC_016902:2361628:2381339238133923827571419Escherichia coli KO11FL chromosome, complete genomediguanylate cyclase4e-0650.1
NC_016112:57641:6315563155653142160Methylomicrobium alcaliphilum chromosome, complete genomePAS fold family4e-0650.1
NC_010159:1710268:1712903171290317149842082Yersinia pestis Angola, complete genomeputative sensory box-containing diguanylate cyclase6e-0649.7
NC_013850:2182337:2246690224669022480241335Klebsiella variicola At-22 chromosome, complete genomediguanylate cyclase6e-0649.7
NC_012108:4417483:4435016443501644363081293Desulfobacterium autotrophicum HRM2, complete genomeGGDEF domain family protein6e-0649.7
NC_014650:2097900:2097900209790020997441845Geobacillus sp. Y4.1MC1 chromosome, complete genomediguanylate cyclase and metal dependent phosphohydrolase6e-0649.7
NC_010506:1893000:1900209190020919020771869Shewanella woodyi ATCC 51908, complete genomediguanylate cyclase5e-0649.7
NC_014632:567289:5672895672895686861398Ilyobacter polytropus DSM 2926 chromosome, complete genomediguanylate cyclase5e-0649.7
NC_011742:1574036:1596559159655915979771419Escherichia coli S88 chromosome, complete genomemembrane-associated diguanylate cyclase (GGDEF domain)5e-0649.7
NC_008149:2652825:2656187265618726575421356Yersinia pestis Nepal516, complete genomehypothetical protein5e-0649.7
NC_007498:1072112:1076128107612810778731746Pelobacter carbinolicus DSM 2380, complete genomesensory box histidine kinase5e-0649.7
NC_015410:3791500:3805906380590638070901185Pseudomonas mendocina NK-01 chromosome, complete genomediguanylate cyclase7e-0649.3
NC_013216:1748241:1765192176519217667301539Desulfotomaculum acetoxidans DSM 771, complete genomediguanylate cyclase with PAS/PAC sensor8e-0649.3
NC_011146:3376816:3384287338428733855851299Geobacter bemidjiensis Bem, complete genomediguanylate cyclase8e-0649.3
NC_008800:1942000:1961046196104619631212076Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein8e-0648.9
NC_016514:891772:9260869260869278701785Enterobacter cloacae EcWSU1 chromosome, complete genomediguanylate cyclase DosC1e-0548.9