Pre_GI: BLASTP Hits

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Query: NC_008228:3841897:3855288 Pseudoalteromonas atlantica T6c, complete genome

Start: 3855288, End: 3855686, Length: 399

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013282:2827757:284725528472552847650396Cronobacter turicensis, complete genomeGlycerol-3-phosphate cytidylyltransferase2e-52204
NC_011745:2302979:231846323184632318858396Escherichia coli ED1a chromosome, complete genomeglycerol-3-phosphate cytidylyltransferase1e-47188
NC_004431:3513147:352744135274413527848408Escherichia coli CFT073, complete genomePutative glycerol-3-phosphate cytidyltransferase1e-43174
NC_014972:2371647:238388323838832384275393Desulfobulbus propionicus DSM 2032 chromosome, complete genomeglycerol-3-phosphate cytidylyltransferase9e-41165
NC_014924:725380:740953740953741372420Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomecytidyltransferase-related domain protein5e-40162
NC_012039:257962:264092264092264481390Campylobacter lari RM2100, complete genomeglycerol-3-phosphate cytidylyltransferase, putative1e-38158
NC_016112:806256:812924812924813340417Methylomicrobium alcaliphilum chromosome, complete genomeglycerol-3-phosphate cytidylyltransferase3e-35146
NC_017075:4421486:442148644214864421941456Rubrivivax gelatinosus IL144, complete genomeglycerol-3-phosphate cytidylyltransferase TagD2e-34144
NC_004307:1815825:183077718307771831169393Bifidobacterium longum NCC2705, complete genomeprobable glycerol-3-phosphate cytidylyltransferase7e-34142
NC_010483:273080:285163285163285720558Thermotoga sp. RQ2, complete genomeglycerol-3-phosphate cytidylyltransferase1e-33141
NC_014550:1581812:165691016569101657371462Arthrobacter arilaitensis Re117, complete genomeglycerol-3-phosphate cytidylyltransferase9e-33138
NC_015581:1043394:105739510573951057865471Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeglycerol-3-phosphate cytidylyltransferase1e-32138
NC_000964:3658000:367961136796113680000390Bacillus subtilis subsp. subtilis str. 168, complete genomeglycerol-3-phosphate cytidylyltransferase2e-32137
NC_014976:1671594:168188816818881682277390Bacillus subtilis BSn5 chromosome, complete genomeglycerol-3-phosphate cytidylyltransferase2e-32137
NC_017195:3459567:347249534724953472884390Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeglycerol-3-phosphate cytidylyltransferase2e-32137
NC_013172:3093467:312859631285963128997402Brachybacterium faecium DSM 4810, complete genomeGlycerol-3-phosphate cytidylyltransferase2e-32137
NC_016047:3632489:364745236474523647841390Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeglycerol-3-phosphate cytidylyltransferase3e-32136
NC_009655:866281:876134876134876592459Actinobacillus succinogenes 130Z chromosome, complete genomeglycerol-3-phosphate cytidylyltransferase5e-32136
NC_006322:3628143:364290636429063643301396Bacillus licheniformis ATCC 14580, complete genomeTagD6e-32135
NC_009848:3190619:320954732095473209945399Bacillus pumilus SAFR-032, complete genomeglycerol-3-phosphate cytidylyltransferase7e-31132
NC_008529:1634403:164008116400811640545465Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeCytidylyltransferase1e-30131
NC_020244:3490460:350527135052713505660390Bacillus subtilis XF-1, complete genomeglycerol-3-phosphate cytidylyltransferase1e-30131
NC_009052:2683447:270432427043242704755432Shewanella baltica OS155, complete genomecytidyltransferase-related domain3e-30130
NC_014727:1832144:183862918386291839093465Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,glycerol-3-phosphate cytidylyltransferase5e-30129
NC_008054:1617544:162489516248951625359465Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeEpsIIN, Glycerol-3-phosphate cytidylyltransferase6e-30129
NC_014479:3452484:346950634695063469895390Bacillus subtilis subsp. spizizenii str. W23 chromosome, completehypothetical protein4e-29126
NC_014554:1019730:103805710380571038452396Lactobacillus plantarum subsp. plantarum ST-III chromosome,glycerol-3-phosphate cytidylyltransferase5e-29126
NC_006300:600516:610386610386610844459Mannheimia succiniciproducens MBEL55E, complete genomeTagD protein6e-29125
NC_013165:1665014:168354316835431683926384Slackia heliotrinireducens DSM 20476, complete genomeGlycerol-3-phosphate cytidylyltransferase8e-27119
NC_008610:944985:955226955226955681456Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica),cytidyltransferase-related domain5e-27119
NC_009901:1693500:172779017277901728245456Shewanella pealeana ATCC 700345, complete genomeglycerol-3-phosphate cytidylyltransferase4e-27119
NC_011566:1639444:165247016524701652934465Shewanella piezotolerans WP3, complete genomeCytidyltransferase-like protein9e-27118
NC_010334:1783500:181142718114271811882456Shewanella halifaxensis HAW-EB4, complete genomeglycerol-3-phosphate cytidylyltransferase1e-26118
NC_015311:2826000:2834712283471228360581347Prevotella denticola F0289 chromosome, complete genomeputative glycerol-3-phosphate cytidylyltransferase6e-23105
NC_006270:3627974:364271936427193643126408Bacillus licheniformis ATCC 14580, complete genomeglycerol-3-phosphate cytidylyltransferase1e-22105
NC_016077:998741:1032055103205510333921338Acidaminococcus intestini RyC-MR95 chromosome, complete genomeglycerol-3-phosphate cytidyltransferase7e-22102
NC_015975:1593797:1612685161268516140071323Lactobacillus ruminis ATCC 27782 chromosome, complete genomeglycerol-3-phosphate cytidylyltransferase5e-2199.4
NC_013530:2819569:2843767284376728451101344Xylanimonas cellulosilytica DSM 15894, complete genomecytidyltransferase-related domain protein1e-1891.7
NC_018867:1161648:118653911865391186970432Dehalobacter sp. CF chromosome, complete genomeGlycerol-3-phosphate cytidylyltransferase1e-1891.7
NC_015571:2273503:229166922916692292127459Porphyromonas gingivalis TDC60, complete genomeglycerol-3-phosphate cytidylyltransferase6e-1889.4
NC_015581:1043394:107500210750021075415414Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomecytidyltransferase-related domain-containing protein8e-1785.9
NC_016620:341699:366380366380366841462Bacteriovorax marinus SJ, complete genomeglycerol-3-phosphate cytidylyltransferase2e-1684.3
NC_012108:2065355:206969520696952070144450Desulfobacterium autotrophicum HRM2, complete genomeHldE8e-1475.5
NC_019896:536500:542669542669542950282Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeGlycerol-3-phosphate cytidylyltransferase1e-1271.6
NC_011027:1971580:200200120020012002504504Chlorobaculum parvum NCIB 8327, complete genomerfaE bifunctional protein2e-1270.9
NC_010085:1174917:118824311882431188863621Nitrosopumilus maritimus SCM1, complete genomecytidyltransferase-related domain1e-1168.6
NC_012108:2037429:204066320406632041169507Desulfobacterium autotrophicum HRM2, complete genomeputative ADP-heptose synthase4e-1166.6
NC_015730:921735:928001928001928444444Roseobacter litoralis Och 149 chromosome, complete genomehypothetical protein6e-1166.2
NC_013156:127000:143640143640144092453Methanocaldococcus fervens AG86, complete genomecytidyltransferase-related domain protein1e-1065.5
NC_008639:378181:382706382706383263558Chlorobium phaeobacteroides DSM 266, complete genomerfaE bifunctional protein2e-1064.7
NC_002932:221661:226171226171226668498Chlorobium tepidum TLS, complete genomecytidylyltransferase family protein1e-1064.7
NC_012440:1841315:184666818466681847123456Persephonella marina EX-H1, complete genomebifunctional protein RfaE, domain II2e-1064.3
NC_013715:1750403:176338417633841763881498Rothia mucilaginosa DY-18, complete genomecytidylyltransferase3e-1063.9
NC_011026:2269986:230750023075002308006507Chloroherpeton thalassium ATCC 35110, complete genomerfaE bifunctional protein3e-1063.5
NC_014820:71565:102510102510103118609Cenarchaeum symbiosum A, complete genomecytidylyltransferase2e-0961.2
NC_015420:35384:397033970339888186Lactobacillus buchneri NRRL B-30929 plasmid pLBUC01, completecytidyltransferase-related domain protein4e-0960.1
NC_007947:797456:8087818087818102471467Methylobacillus flagellatus KT, complete genomeRfaE bifunctional protein, domain I6e-0959.7
NC_015554:817500:8179498179498193791431Alteromonas sp. SN2 chromosome, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase7e-0959.3
NC_008740:876115:8898928898928913371446Marinobacter aquaeolei VT8, complete genomerfaE bifunctional protein1e-0858.5
NC_015636:1061736:107623310762331076682450Methanothermococcus okinawensis IH1 chromosome, complete genomecytidyltransferase-related domain-containing protein1e-0858.5
NC_015144:997587:101250710125071012950444Weeksella virosa DSM 16922 chromosome, complete genomecytidyltransferase-related domain protein1e-0858.2
NC_012225:787737:807332807332807793462Brachyspira hyodysenteriae WA1, complete genomeputative RfaE, ADP-heptose synthase1e-0858.2
NC_015177:1476073:1486519148651914880001482Pedobacter saltans DSM 12145 chromosome, complete genomecytidyltransferase-related domain protein2e-0858.2
NC_007498:1491223:1503604150360415050761473Pelobacter carbinolicus DSM 2380, complete genomeputative ADP-heptose synthase2e-0857.8
NC_014632:1514500:152816315281631528699537Ilyobacter polytropus DSM 2926 chromosome, complete genomerfaE bifunctional protein2e-0857.8
NC_019892:7822000:7823273782327378248291557Singulisphaera acidiphila DSM 18658 chromosome, complete genomeD-heptose-1-phosphate adenylyltransferase3e-0857.4
NC_007510:1921251:194059419405941941127534Burkholderia sp. 383 chromosome 1, complete sequenceCytidyltransferase-related4e-0856.6
NC_015556:4543380:4545300454530045467211422Pseudomonas fulva 12-X chromosome, complete genomeBifunctional protein hldE4e-0856.6
NC_013192:305478:324188324188324682495Leptotrichia buccalis DSM 1135, complete genomerfaE bifunctional protein4e-0856.6
NC_015410:709947:7248167248167262371422Pseudomonas mendocina NK-01 chromosome, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase5e-0856.2
NC_017514:96911:120122120122120628507Neisseria meningitidis M01-240149 chromosome, complete genomehldE bifunctional protein, domain II6e-0856.2
NC_016612:627118:6397536397536411861434Klebsiella oxytoca KCTC 1686 chromosome, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase6e-0856.2
NC_010803:301753:306305306305306808504Chlorobium limicola DSM 245, complete genomerfaE bifunctional protein6e-0856.2
NC_012489:1874415:187955218795521880040489Gemmatimonas aurantiaca T-27, complete genomeD-beta-D-heptose 1-phosphate adenosyltransferase8e-0855.8
NC_012039:412837:4545624545624559351374Campylobacter lari RM2100, complete genomeD,D-heptose 1-phosphate adenosyltransferase/7-phosphate kinase7e-0855.8
NC_009439:637193:6566856566856581061422Pseudomonas mendocina ymp, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase9e-0855.5
NC_011979:2352961:2352961235296123544241464Geobacter sp. FRC-32, complete genomerfaE bifunctional protein2e-0754.7
NC_014639:3850000:386436438643643864579216Bacillus atrophaeus 1942 chromosome, complete genomeglycerol-3-phosphate cytidylyltransferase2e-0754.7
CP002207:3850000:386436438643643864579216Bacillus atrophaeus 1942, complete genomeglycerol-3-phosphate cytidylyltransferase2e-0754.7
NC_010473:3273882:3291087329108732925201434Escherichia coli str. K-12 substr. DH10B, complete genomefused heptose 7-phosphate kinase and heptose 1-phosphate adenyltransferase2e-0754.3
NC_009801:3511444:3525004352500435264371434Escherichia coli E24377A, complete genomebifunctional protein HldE2e-0754.3
CU928145:3529930:3544071354407135455041434Escherichia coli 55989 chromosome, complete genomefused heptose 7-phosphate kinase ; heptose 1-phosphate adenyltransferase2e-0754.3
AC_000091:3180275:3193976319397631954091434Escherichia coli W3110 DNA, complete genomefused heptose 7-phosphate kinase and heptose 1-phosphate adenyltransferase2e-0754.3
NC_009800:3224575:3238709323870932401421434Escherichia coli HS, complete genomebifunctional protein HldE2e-0754.3
CP002516:693703:6965916965916980241434Escherichia coli KO11, complete genomerfaE bifunctional protein2e-0754.3
NC_011750:3683760:3699627369962737010601434Escherichia coli IAI39 chromosome, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase2e-0754.3
AP010958:3787991:3806380380638038078131434Escherichia coli O103:H2 str. 12009 DNA, complete genomefused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase2e-0754.3
NC_010468:694943:6991556991557005881434Escherichia coli ATCC 8739, complete genomerfaE bifunctional protein2e-0754.3
CU928160:3263248:3276808327680832782411434Escherichia coli IAI1 chromosome, complete genomefused heptose 7-phosphate kinase ; heptose 1-phosphate adenyltransferase2e-0754.3
CP002185:3393813:3408051340805134094841434Escherichia coli W, complete genomefused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase2e-0754.3
NC_000913:3176000:3193342319334231947751434Escherichia coli K12, complete genomefused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase2e-0754.3
NC_011748:3529930:3544071354407135455041434Escherichia coli 55989, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase2e-0754.3
NC_011415:3443851:3458088345808834595211434Escherichia coli SE11 chromosome, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase2e-0754.3
NC_000907:1568867:1595753159575315971831431Haemophilus influenzae Rd KW20, complete genomeADP-heptose synthase2e-0754.3
NC_016902:693703:6965916965916980241434Escherichia coli KO11FL chromosome, complete genomerfaE bifunctional protein2e-0754.3
NC_016822:3485631:3502652350265235040851434Shigella sonnei 53G, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase2e-0754.3
NC_013364:3840000:3855947385594738573801434Escherichia coli O111:H- str. 11128, complete genomefused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase2e-0754.3
NC_013361:4102894:4117132411713241185651434Escherichia coli O26:H11 str. 11368 chromosome, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase2e-0754.3
NC_013353:3787991:3806380380638038078131434Escherichia coli O103:H2 str. 12009, complete genomefused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase2e-0754.3
NC_012967:3113768:3128154312815431295871434Escherichia coli B str. REL606 chromosome, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase2e-0754.3
NC_012947:708064:7109527109527123851434Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase2e-0754.3
NC_012759:3063285:3080490308049030819231434Escherichia coli BW2952 chromosome, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase2e-0754.3
NC_011745:3627438:3644399364439936458321434Escherichia coli ED1a chromosome, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase2e-0754.3
NC_011741:3263248:3276808327680832782411434Escherichia coli IAI1 chromosome, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase2e-0754.3
NC_015320:790137:794759794759795250492Archaeoglobus veneficus SNP6 chromosome, complete genomecytidyltransferase-related domain-containing protein4e-0753.5
NC_011768:1718869:1745645174564517469491305Desulfatibacillum alkenivorans AK-01, complete genomephosphoenolpyruvate phosphomutase5e-0753.1
NC_015381:4070968:408571640857164086192477Burkholderia gladioli BSR3 chromosome 1, complete sequencePutative cytidylyltransferase8e-0752.4
NC_013416:1588369:1595352159535215967821431Aggregatibacter actinomycetemcomitans D11S-1, complete genomebifunctional protein HldE2e-0650.8
NC_016513:1924242:1931282193128219327121431Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase2e-0650.8
NC_014935:1389000:1411132141113214124211290Nitratifractor saLSUginis DSM 16511 chromosome, complete genomephosphoenolpyruvate phosphomutase3e-0650.8
NC_005061:65861:6818568185696241440Candidatus Blochmannia floridanus, complete genomeADP-heptose synthase3e-0650.8
NC_014216:2127370:2154075215407521553941320Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomephosphoenolpyruvate phosphomutase4e-0650.1