Pre_GI: BLASTP Hits

Some Help

Query: NC_008228:3841897:3845545 Pseudoalteromonas atlantica T6c, complete genome

Start: 3845545, End: 3847674, Length: 2130

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015497:1287877:1328279132827913304202142Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomehypothetical protein01147
NC_017047:3936624:3961790396179039638832094Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein2e-174612
NC_015061:3840463:3900115390011539022082094Rahnella sp. Y9602 chromosome, complete genomehypothetical protein3e-174612
NC_012917:1506083:1540537154053715426602124Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein1e-173610
NC_016818:3887000:3910763391076339128562094Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative lipoprotein5e-171601
NC_013421:3279499:3277367327736732795022136Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF940 membrane lipoprotein putative1e-163577
NC_008570:3220539:3227224322722432292752052Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeYjbH1e-162573
NC_008322:1595500:1624150162415016265132364Shewanella sp. MR-7, complete genomeprotein of unknown function DUF940, membrane lipoprotein putative2e-155550
NC_008321:1523323:1552740155274015551032364Shewanella sp. MR-4, complete genomeprotein of unknown function DUF940, membrane lipoprotein putative2e-154546
NC_008750:1659095:1675547167554716779132367Shewanella sp. W3-18-1, complete genomeprotein of unknown function DUF940, membrane lipoprotein putative4e-154545
NC_009654:866124:8661248661248683372214Marinomonas sp. MWYL1, complete genomeprotein of unknown function DUF940 membrane lipoprotein putative7e-154544
NC_011663:1709003:1743937174393717463062370Shewanella baltica OS223 chromosome, complete genomehypothetical protein2e-152539
NC_016602:103878:1455811455811478362256Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceWbfB-like protein5e-151535
NC_009783:649500:6674906674906696522163Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein9e-150531
NC_015633:461143:4589364589364611462211Vibrio anguillarum 775 chromosome chromosome I, complete sequenceWbfB3e-141502
NC_014931:5088125:5088886508888650919303045Variovorax paradoxus EPS chromosome, complete genomeprotein of unknown function DUF940 membrane lipoprotein1e-121437
NC_007492:4310828:4330956433095643330342079Pseudomonas fluorescens PfO-1, complete genomeProtein of unknown function DUF9402e-119430
NC_016147:1435000:1450226145022614524332208Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein1e-113411
NC_012791:2052923:2077486207748620804582973Variovorax paradoxus S110 chromosome 1, complete genomeprotein of unknown function DUF940 membrane lipoprotein putative2e-112407
NC_014394:1373602:1400546140054614041933648Gallionella capsiferriformans ES-2 chromosome, complete genomehypothetical protein4e-109395
NC_005085:786851:7966497966497995102862Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein4e-27123
NC_000918:336232:339619339619340080462Aquifex aeolicus VF5, complete genomehypothetical protein4e-0860.5