Pre_GI: BLASTP Hits

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Query: NC_008228:372520:385210 Pseudoalteromonas atlantica T6c, complete genome

Start: 385210, End: 386595, Length: 1386

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009921:565947:5748705748705760301161Frankia sp. EAN1pec, complete genomeWD40 domain protein beta Propeller5e-25115
NC_013510:2521186:2537477253747725386461170Thermomonospora curvata DSM 43183, complete genomeprotein of unknown function DUF8392e-23110
NC_009142:5519208:5546836554683655479871152Saccharopolyspora erythraea NRRL 2338, complete genomehypothetical protein3e-22106
NC_018681:5378197:5381803538180353829151113Nocardia brasiliensis ATCC 700358 chromosome, complete genomehypothetical protein5e-1892.8
NC_014623:4426416:4442788444278844439541167Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein5e-1789.4
NC_013947:373862:397699397699398685987Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehypothetical protein3e-0963.5