Pre_GI: BLASTP Hits

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Query: NC_008228:3608909:3623460 Pseudoalteromonas atlantica T6c, complete genome

Start: 3623460, End: 3624542, Length: 1083

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016745:3170384:3174556317455631756291074Oceanimonas sp. GK1 chromosome, complete genome4-hydroxyphenylpyruvate dioxygenase7e-126450
NC_008786:2425314:2428180242818024293131134Verminephrobacter eiseniae EF01-2, complete genome4-hydroxyphenylpyruvate dioxygenase9e-106383
NC_018868:3229381:3243188324318832442671080Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome4-hydroxyphenylpyruvate dioxygenase3e-97355
NC_015594:332432:3439143439143449541041Sphingobium chlorophenolicum L-1 chromosome chromosome 2, complete4-hydroxyphenylpyruvate dioxygenase2e-94345
NC_009901:2272206:2283981228398122850211041Shewanella pealeana ATCC 700345, complete genome4-hydroxyphenylpyruvate dioxygenase6e-77288
NC_003296:1696958:1698945169894517000301086Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE OXIDOREDUCTASE PROTEIN1e-62240
NC_003296:1665569:1668755166875516698401086Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE OXIDOREDUCTASE PROTEIN1e-62240
NC_015638:923660:9328339328339339961164Lacinutrix sp. 5H-3-7-4 chromosome, complete genome4-hydroxyphenylpyruvate dioxygenase1e-42174
NC_007963:317291:3306503306503324971848Chromohalobacter salexigens DSM 3043, complete genome4-hydroxyphenylpyruvate dioxygenase1e-42174
NC_015580:1302000:1324167132416713260291863Novosphingobium sp. PP1Y, complete genome4-hydroxyphenylpyruvate dioxygenase8e-42171
NC_016001:224213:2421032421032432661164Flavobacterium branchiophilum, complete genome4-hydroxyphenylpyruvate dioxygenase3e-40166
NC_015953:2681331:2681331268133126824761146Streptomyces sp. SirexAA-E chromosome, complete genome4-hydroxyphenylpyruvate dioxygenase2e-40166
NC_013169:1058463:1079124107912410803471224Kytococcus sedentarius DSM 20547, complete genome4-hydroxyphenylpyruvate dioxygenase6e-36151
NC_008268:3335035:3353475335347533546891215Rhodococcus sp. RHA1, complete genome4-hydroxyphenylpyruvate dioxygenase4e-35149
NC_015563:2702787:270278727027872703671885Delftia sp. Cs1-4 chromosome, complete genome4-hydroxyphenylpyruvate dioxygenase2e-29129
NC_007777:2841000:2861770286177028628371068Frankia sp. CcI3, complete genome4-hydroxyphenylpyruvate dioxygenase2e-28126
NC_009380:3043140:3072970307297030740461077Salinispora tropica CNB-440 chromosome, complete genome4-hydroxyphenylpyruvate dioxygenase5e-24112
NC_011992:1179084:119108511910851191402318Acidovorax ebreus TPSY, complete genome1e-20100
NC_008010:105665:1142081142081156411434Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceXylose isomerase-like TIM barrel1e-1584.3
NC_008010:105665:113029113029113478450Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence4-hydroxyphenylpyruvate dioxygenase2e-1170.1