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Query: NC_008228:3608909:3621079 Pseudoalteromonas atlantica T6c, complete genome

Start: 3621079, End: 3621345, Length: 267

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013851:3321853:332343633234363323756321Allochromatium vinosum DSM 180 chromosome, complete genomeLate competence development protein ComFB9e-1268.9
NC_008577:3125675:314403331440333144320288Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein2e-1167.8
NC_009092:2902171:292757329275732927851279Shewanella loihica PV-4, complete genomehypothetical protein2e-1167.8
NC_014012:3356629:337396633739663374235270Shewanella violacea DSS12, complete genomehypothetical protein2e-1167.8
NC_008322:2983951:300419330041933004480288Shewanella sp. MR-7, complete genomehypothetical protein5e-1166.6
NC_008321:2922000:294351029435102943797288Shewanella sp. MR-4, complete genomehypothetical protein5e-1166.2
NC_014966:919442:937976937976938350375Vibrio vulnificus MO6-24/O chromosome II, complete sequencehypothetical protein1e-0652
NC_015572:319725:332915332915333190276Methylomonas methanica MC09 chromosome, complete genomeLate competence development protein ComFB8e-0648.9