Pre_GI: BLASTP Hits

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Query: NC_008228:3608909:3617682 Pseudoalteromonas atlantica T6c, complete genome

Start: 3617682, End: 3620582, Length: 2901

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009052:1899954:1906515190651519093042790Shewanella baltica OS155, complete genomeTonB-dependent receptor, plug0939
NC_014541:1280835:1288209128820912910522844Ferrimonas balearica DSM 9799 chromosome, complete genomeTonB-dependent receptor2e-165583
NC_014012:3356629:3361888336188833648092922Shewanella violacea DSS12, complete genomeTonB-dependent receptor7e-87322
NC_008321:2922000:2931349293134929340722724Shewanella sp. MR-4, complete genomeTonB-dependent receptor2e-85318
NC_017271:3057161:3084101308410130870912991Xanthomonas campestris pv. raphani 756C chromosome, completeTonB-dependent outer membrane receptor8e-83309
NC_008322:2983951:2991848299184829947482901Shewanella sp. MR-7, complete genomeTonB-dependent receptor8e-82305
NC_014541:1280835:1302799130279913054202622Ferrimonas balearica DSM 9799 chromosome, complete genomeTonB-dependent receptor3e-74280
NC_009052:1899954:1910001191000119128172817Shewanella baltica OS155, complete genomeTonB-dependent receptor4e-66253
NC_007508:4067862:4092016409201640948592844Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeTonB-dependent outer membrane receptor5e-63243
NC_003919:2956404:2970504297050429733982895Xanthomonas axonopodis pv. citri str. 306, complete genomeTonB-dependent receptor3e-62241
NC_010688:2052619:2054809205480920577092901Xanthomonas campestris pv. campestris, complete genomeTonB-dependent outer membrane receptor precursor5e-62240
NC_011071:4000620:4000620400062040034542835Stenotrophomonas maltophilia R551-3, complete genomeTonB-dependent receptor2e-60234
NC_015583:4879:1490314903176502748Novosphingobium sp. PP1Y plasmid Mpl, complete sequenceTonB-dependent receptor7e-59229
NC_011663:3181579:3188125318812531909322808Shewanella baltica OS223 chromosome, complete genomeTonB-dependent receptor7e-59229
NC_011663:3181579:3193254319325431960462793Shewanella baltica OS223 chromosome, complete genomeTonB-dependent receptor1e-55219
NC_015976:3118804:3119860311986031229943135Sphingobium sp. SYK-6, complete genomeTonB-dependent receptor-like protein5e-55216
NC_008577:3125675:3131779313177931345922814Shewanella sp. ANA-3 chromosome 1, complete sequenceTonB-dependent receptor5e-53210
NC_010338:650054:6500546500546531523099Caulobacter sp. K31, complete genomeTonB-dependent receptor3e-42174
NC_009831:2045811:2059048205904820617292682Shewanella sediminis HAW-EB3, complete genomeTonB-dependent receptor, plug1e-37159
NC_009092:2902171:2914896291489629175262631Shewanella loihica PV-4, complete genomeTonB-dependent receptor2e-27125
NC_004347:3028000:3034793303479330374472655Shewanella oneidensis MR-1, complete genomeTonB-dependent receptor domain protein7e-26120
NC_008321:2190000:2207398220739822100702673Shewanella sp. MR-4, complete genomeTonB-dependent receptor7e-26120
NC_014541:1280835:1291430129143012942372808Ferrimonas balearica DSM 9799 chromosome, complete genomeTonB-dependent receptor6e-25117
NC_010688:605018:6255796255796284642886Xanthomonas campestris pv. campestris, complete genomeTonB-dependent outer membrane receptor4e-24114
NC_007086:626891:6476676476676505522886Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein3e-24114
NC_003902:624828:6456046456046484892886Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein3e-24114
NC_014541:1280835:1305871130587113085432673Ferrimonas balearica DSM 9799 chromosome, complete genomeTonB-dependent receptor5e-23110
NC_015947:4248536:4266001426600142689762976Burkholderia sp. JV3 chromosome, complete genomeTonB-dependent receptor2e-1999
NC_010943:4527366:4540471454047145434462976Stenotrophomonas maltophilia K279a, complete genomeputative TonB dependent receptor2e-1999
NC_011144:2710876:2726412272641227293842973Phenylobacterium zucineum HLK1, complete genomeTonB-dependent receptor3e-1997.8
NC_014541:2510819:2510819251081925136412823Ferrimonas balearica DSM 9799 chromosome, complete genomeTonB-dependent receptor1e-1895.9
NC_008700:2451798:2462458246245824656643207Shewanella amazonensis SB2B, complete genomeTonB-dependent receptor3e-1791.3
NC_010508:1898547:1914285191428519170052721Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceTonB-dependent receptor2e-1689
NC_015594:1210736:1229937122993712325102574Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeTonB-dependent receptor plug4e-1584.3
NC_010943:1379707:1379707137970713824932787Stenotrophomonas maltophilia K279a, complete genomeputative TonB dependent receptor protein5e-1584
NC_014118:2417838:2430711243071124334672757Burkholderia sp. CCGE1002 chromosome chromosome 2, completeTonB-dependent receptor1e-1482.8
NC_015580:1302000:1321387132138713239872601Novosphingobium sp. PP1Y, complete genomeTonB-dependent receptor4e-1480.9
NC_015856:1152021:1155509115550911583102802Collimonas fungivorans Ter331 chromosome, complete genomeTonB-dependent receptor6e-1480.5
NC_015593:2841856:2885638288563828887123075Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeTonB-dependent receptor1e-1379.7
NC_016147:513819:5213995213995243262928Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeTonB-dependent receptor1e-1379.3
NC_015583:4879:6417641791732757Novosphingobium sp. PP1Y plasmid Mpl, complete sequenceTonB-dependent receptor1e-1379.3
NC_015976:2150676:2159823215982321623842562Sphingobium sp. SYK-6, complete genomeTonB-dependent receptor-like protein2e-1379
NC_014013:112008:1120081120081149742967Sphingobium japonicum UT26S chromosome 2, complete genomeTonB-dependent receptor-like protein2e-1378.6
NC_015497:1058980:1072045107204510745762532Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeTonB-dependent receptor3e-1378.2
NC_010338:2136193:2136193213619321392553063Caulobacter sp. K31, complete genomeTonB-dependent receptor4e-1377.4
NC_020541:2694836:2699604269960427019792376Rhodanobacter sp. 2APBS1, complete genomeouter membrane cobalamin receptor protein7e-1377
NC_020541:468584:4862444862444886432400Rhodanobacter sp. 2APBS1, complete genomeouter membrane receptor for ferrienterochelin and colicins3e-1275.1
NC_013722:751473:7556887556887581232436Xanthomonas albilineans, complete genomeputative tonb-dependent outer membrane receptor protein5e-1273.9
NC_006526:1303635:1310721131072113131382418Zymomonas mobilis subsp. mobilis ZM4, complete genomeTonB-dependent receptor4e-1067.8
NC_018145:50237:6013060130625472418Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completeTonB-dependent receptor plug4e-1067.8
NC_011144:2674242:2688413268841326909142502Phenylobacterium zucineum HLK1, complete genomeTonB-dependent receptor3e-1067.8
NC_003198:3586000:3601247360124736030911845Salmonella enterica subsp. enterica serovar Typhi str. CT18,vitamin B12 receptor protein5e-1067.4
NC_006511:4119332:4121860412186041237041845Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCvitamin B12 receptor protein5e-1067.4
NC_017075:1233377:1249574124957412520602487Rubrivivax gelatinosus IL144, complete genomeputative TonB-dependent receptor8e-1066.6
NC_016147:513819:5351035351035378862784Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeTonB-dependent receptor2e-0965.5
NC_010468:4455201:4466591446659144684351845Escherichia coli ATCC 8739, complete genomeTonB-dependent vitamin B12 receptor5e-0963.9
NC_010473:4256000:4261359426135942632031845Escherichia coli str. K-12 substr. DH10B, complete genomevitamin B12/cobalamin outer membrane transporter5e-0963.9
NC_000913:4159090:4161662416166241635061845Escherichia coli K12, complete genomevitamin B12/cobalamin outer membrane transporter5e-0963.9
CU928160:4248621:4252870425287042547141845Escherichia coli IAI1 chromosome, complete genomevitamin B12/cobalamin outer membrane transporter5e-0963.9
NC_006677:215466:2242262242262267332508Gluconobacter oxydans 621H, complete genomeTonB-dependent outer membrane receptor8e-0963.5
NC_020125:2080126:2080126208012620828672742Riemerella anatipestifer RA-CH-2, complete genomeOuter membrane receptor protein, mostly Fe transport1e-0863.2
NC_007086:459934:4731174731174757262610Xanthomonas campestris pv. campestris str. 8004, complete genomeTonB-dependent receptor2e-0862
NC_017271:4410500:4417282441728244198432562Xanthomonas campestris pv. raphani 756C chromosome, completeTonB-dependent receptor2e-0862
NC_003902:461808:4725264725264751472622Xanthomonas campestris pv. campestris str. ATCC 33913, completeTonB-dependent receptor2e-0862
NC_014838:589581:5965455965455987372193Pantoea sp. At-9b plasmid pPAT9B01, complete sequenceTonB-dependent siderophore receptor2e-0862
NC_010688:449649:4603714603714629862616Xanthomonas campestris pv. campestris, complete genomeexported TonB-dependent transferrin-binding receptor3e-0861.6
NC_014258:355845:3605163605163626902175Pantoea vagans C9-1 plasmid pPag3, complete sequenceTonB-dependent outer membrane siderophore receptor4e-0861.2
NC_005810:3493607:3497913349791334998741962Yersinia pestis biovar Microtus str. 91001, complete genomevitamin B12/cobalamin outer membrane transporter4e-0861.2
NC_010067:171053:1829001829001850862187Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-0860.1
NC_011080:2897977:2900230290023029024042175Salmonella enterica subsp. enterica serovar Newport str. SL254,TonB dependent outer membrane siderophore receptor protein7e-0860.1
NC_015968:1165829:1175756117575611780112256Enterobacter asburiae LF7a chromosome, complete genomeTonB-dependent siderophore receptor1e-0759.3
NC_016863:2844883:2892077289207728942572181Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1outer membrane receptor FepA1e-0759.3
NC_011747:86000:99851998511020132163Escherichia coli S88 plasmid pECOS88, complete sequenceouter membrane receptor FepA1e-0759.3
NC_008253:296500:3201213201213222982178Escherichia coli 536, complete genomeTonB dependent outer membrane siderophore receptor1e-0759.3
NC_011094:2791719:2830711283071128328852175Salmonella enterica subsp. enterica serovar Schwarzengrund strouter membrane receptor FepA2e-0758.9
NC_011274:2793355:2799369279936928015492181Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91outer membrane receptor FepA2e-0758.9
NC_006625:1:1366613666158402175Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequenceouter membrane receptor FepA2e-0758.9
NC_006905:2857699:2878274287827428804542181Salmonella enterica subsp. enterica serovar Choleraesuis strTonB-dependent siderophore receptor protein2e-0758.5
NC_011083:2847318:2898099289809929002732175Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,TonB dependent outer membrane siderophore receptor protein2e-0758.5
NC_016810:2943912:2946165294616529483452181Salmonella enterica subsp. enterica serovar Typhimurium strTonB-dependent outer membrane siderophore receptor protein2e-0758.5
NC_016856:2896630:2943824294382429460042181Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Souter membrane receptor FepA2e-0758.5
NC_016857:2943912:2946165294616529483452181Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74outer membrane receptor FepA2e-0758.5
NC_017046:2943929:2944906294490629470862181Salmonella enterica subsp. enterica serovar Typhimurium str. 798TonB-dependent outer membrane siderophore receptor protein2e-0758.5
NC_011294:2802502:2808515280851528106952181Salmonella enterica subsp. enterica serovar Enteritidis strouter membrane receptor FepA2e-0758.5
NC_011149:2829811:2832064283206428342382175Salmonella enterica subsp. enterica serovar Agona str. SL483,TonB dependent outer membrane siderophore receptor protein2e-0758.5
NC_011205:2962270:2968283296828329704572175Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853outer membrane receptor FepA2e-0758.5
NC_016831:2779864:2785878278587827880522175Salmonella enterica subsp. enterica serovar Gallinarum/pullorumTonB-dependent outer membrane siderophore receptor protein2e-0758.5
NC_010102:2881714:2887730288773028899042175Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0758.5
NC_006347:2861498:2882669288266928847952127Bacteroides fragilis YCH46, complete genomeputative TonB-dependent outer membrane protein3e-0758.2
NC_012731:3411161:3433588343358834357622175Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeouter membrane receptor FepA4e-0757.8
NC_003197:2894344:2923589292358929257692181Salmonella typhimurium LT2, complete genomeTonB-dependent siderophore receptor protein5e-0757.4
NC_016860:2917910:2947155294715529493292175Salmonella enterica subsp. enterica serovar Typhimurium strouter membrane receptor FepA5e-0757.4
NC_004631:2755306:2762521276252127647012181Salmonella enterica subsp. enterica serovar Typhi Ty2, completeTonB-dependent outer membrane siderophore receptor protein5e-0757.4
NC_003198:2769449:2776664277666427788442181Salmonella enterica subsp. enterica serovar Typhi str. CT18,TonB-dependent outer membrane siderophore receptor protein5e-0757.4
NC_016832:2743801:2749820274982027519942175Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Ferric enterobactin receptor6e-0757.4
NC_012125:2826624:2858806285880628609862181Salmonella enterica subsp. enterica serovar Paratyphi C strainouter membrane receptor FepA9e-0756.6
NC_016816:1137904:1139079113907911412532175Pantoea ananatis LMG 5342, complete genomeTonB-dependent siderophore receptor1e-0655.8
NC_013956:3273340:3296862329686232990692208Pantoea ananatis LMG 20103 chromosome, complete genomeCirA2e-0655.8
NC_006371:1997954:2001039200103920029881950Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical receptor4e-0654.3
NC_018080:3448392:3473901347390134758621962Pseudomonas aeruginosa DK2 chromosome, complete genomeTonB-dependent receptor5e-0654.3
NC_011026:2624775:2642802264280226449402139Chloroherpeton thalassium ATCC 35110, complete genomeTonB-dependent receptor plug7e-0653.5