Pre_GI: BLASTP Hits

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Query: NC_008228:3608909:3615946 Pseudoalteromonas atlantica T6c, complete genome

Start: 3615946, End: 3617592, Length: 1647

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014010:1392536:1444174144417414464802307Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeTPR repeat protein1e-43178
NC_002678:3210751:3216483321648332181591677Mesorhizobium loti MAFF303099, complete genomehypothetical protein1e-37158
NC_009425:63709:9147091470935632094Enterobacter sp. 638 plasmid pENTE01, complete sequenceTPR repeat-containing protein1e-35151
NC_006138:2397652:2414941241494124176102670Desulfotalea psychrophila LSv54, complete genomehypothetical protein9e-34145
NC_012997:4152938:4177188417718841791761989Teredinibacter turnerae T7901, complete genomesulfotransferase domain containing protein2e-32141
NC_014010:1392536:1448603144860314503571755Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeTPR repeat protein5e-32139
NC_003295:3421520:3421520342152034236222103Ralstonia solanacearum GMI1000, complete genomePROBABLE TPR DOMAIN PROTEIN2e-29130
NC_014541:1231021:1247257124725712492271971Ferrimonas balearica DSM 9799 chromosome, complete genomesulfotransferase7e-29129
NC_020541:268406:2893902893902909821593Rhodanobacter sp. 2APBS1, complete genometetratricopeptide repeat protein,sulfotransferase family protein1e-26121
NC_005071:1903581:1913984191398419164732490Prochlorococcus marinus str. MIT 9313, complete genomeTPR repeat:HAT (Half-A-TPR) repeat6e-1272.8
NC_005071:1903581:1911797191179719138722076Prochlorococcus marinus str. MIT 9313, complete genomeTPR repeat5e-1170.1
NC_018607:895204:910760910760911716957Brachyspira pilosicoli B2904 chromosome, complete genomehypothetical protein6e-1066.2
NC_008820:1659612:1678311167831116811212811Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein1e-0965.5
NC_012440:1841315:1861196186119618622331038Persephonella marina EX-H1, complete genomeTPR Domain containing protein1e-0965.1
NC_012225:2834642:2844286284428628467392454Brachyspira hyodysenteriae WA1, complete genomeputative TPR domain-containing protein1e-0965.1
NC_011894:2503639:2517451251745125199072457Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p202e-0964.7
NC_007516:2090901:2098482209848221003771896Synechococcus sp. CC9605, complete genomehypothetical protein2e-0964.7
NC_019908:121178:1211781211781230281851Brachyspira pilosicoli P43/6/78 chromosome, complete genomehypothetical protein2e-0964.3
NC_011894:3029964:3038773303877330411272355Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p203e-0963.9
NC_011027:1488455:1496721149672114983311611Chlorobaculum parvum NCIB 8327, complete genomeTPR repeat-containing protein5e-0963.2
NC_012225:2834642:2847047284704728484081362Brachyspira hyodysenteriae WA1, complete genomeTPR domain-containing protein6e-0962.8
NC_005125:3446470:3446470344647034477711302Gloeobacter violaceus PCC 7421, complete genomehypothetical protein6e-0962.8
NC_014733:1073540:1094406109440610961061701Methylovorus sp. MP688 chromosome, complete genometetratricopeptide tpr_2 repeat protein7e-0962.8
NC_014408:1455851:1466636146663614677961161Methanothermobacter marburgensis str. Marburg chromosome, completetetratricopeptide repeat domain-containing protein9e-0962.4
NC_014330:505412:5417245417245435741851Brachyspira pilosicoli 95/1000 chromosome, complete genomehypothetical protein3e-0860.8
NC_014150:2617072:2626326262632626285782253Brachyspira murdochii DSM 12563 chromosome, complete genomeTPR repeat-containing protein4e-0860.1
NC_012968:2228943:2233589223358922351181530Methylotenera mobilis JLW8, complete genomeTetratricopeptide TPR_2 repeat protein7e-0859.3
NC_014150:2617072:2624435262443526262881854Brachyspira murdochii DSM 12563 chromosome, complete genomeTPR repeat-containing protein9e-0858.9
NC_000916:31459:4322743227444381212Methanothermobacter thermautotrophicus str. Delta H, completeO-linked GlcNAc transferase1e-0758.5
NC_010793:1508974:1515258151525815164031146Orientia tsutsugamushi str. Ikeda, complete genomeTPR repeat-containing protein 01_091e-0758.5
NC_010793:1158279:1170884117088411720291146Orientia tsutsugamushi str. Ikeda, complete genomeTPR repeat-containing protein 01_071e-0758.5
NC_011894:6295807:6299486629948663026563171Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p202e-0757.8
NC_003454:249304:2679022679022697881887Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeTetratricopeptide repeat family protein2e-0757.8
NC_015416:2113949:2133355213335521348121458Methanosaeta concilii GP-6 chromosome, complete genomeTPR-repeat-containing protein2e-0757.4
NC_011894:7421867:7434437743443774374032967Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p203e-0757.4
NC_014972:322056:3226073226073248832277Desulfobulbus propionicus DSM 2032 chromosome, complete genomeTPR repeat-containing protein3e-0757.4
NC_007677:3316540:3338786333878633404501665Salinibacter ruber DSM 13855, complete genomeTPR repeat protein5e-0756.6
NC_000916:31459:5142651426525651140Methanothermobacter thermautotrophicus str. Delta H, completeO-linked GlcNAc transferase7e-0756.2
NC_000911:1358846:136457913645791365463885Synechocystis sp. PCC 6803, complete genomehypothetical protein6e-0756.2
NC_011729:1496848:1496848149684815006783831Cyanothece sp. PCC 7424 chromosome, complete genomehypothetical protein6e-0756.2
NC_017039:1362292:136360613636061364490885Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein6e-0756.2
NC_017052:1362280:136359413635941364478885Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein6e-0756.2
NC_017277:1362082:136339613633961364280885Synechocystis sp. PCC 6803, complete genomehypothetical protein6e-0756.2
NC_014150:2617072:2628740262874026297981059Brachyspira murdochii DSM 12563 chromosome, complete genomeTPR repeat-containing protein5e-0756.2
NC_014408:1018448:1026328102632810275481221Methanothermobacter marburgensis str. Marburg chromosome, completetetratricopeptide repeat domain-containing protein7e-0755.8
NC_012225:2834642:2842390284239028442431854Brachyspira hyodysenteriae WA1, complete genomehypothetical protein8e-0755.8
NC_016631:3114000:3174039317403931762762238Granulicella mallensis MP5ACTX8 chromosome, complete genomehypothetical protein1e-0655.5
NC_010939:1809446:1828154182815418319873834Actinobacillus pleuropneumoniae serovar 7 str. AP76, completePutative CDP-glycerol:glycerophosphate1e-0655.5
NC_005071:523423:5334295334295346431215Prochlorococcus marinus str. MIT 9313, complete genomeTPR repeat1e-0655.5
NC_007517:2241104:2274011227401122766622652Geobacter metallireducens GS-15, complete genomeTPR repeat protein1e-0655.1
NC_013730:2403930:2403930240393024050331104Spirosoma linguale DSM 74, complete genomeTetratricopeptide TPR_2 repeat protein1e-0655.1
NC_002939:2844240:2867897286789728696541758Geobacter sulfurreducens PCA, complete genomeTPR domain/SEC-C motif domain protein2e-0655.1
NC_007963:2232000:2239021223902122432684248Chromohalobacter salexigens DSM 3043, complete genomesulfotransferase2e-0654.7
NC_014033:395000:4039554039554072753321Prevotella ruminicola 23 chromosome, complete genomehypothetical protein2e-0654.7
NC_005071:288922:3365573365573397303174Prochlorococcus marinus str. MIT 9313, complete genomeTPR repeat2e-0654.3
NC_013851:2211120:2226033222603322279311899Allochromatium vinosum DSM 180 chromosome, complete genomeTPR repeat-containing protein4e-0653.5
NC_009488:681000:694297694297695271975Orientia tsutsugamushi str. Boryong, complete genomehypothetical protein5e-0653.1
NC_010511:637214:6417186417186448883171Methylobacterium sp. 4-46 chromosome, complete genomepeptidase C14 caspase catalytic subunit p205e-0653.1
NC_011894:2549076:2561841256184125649093069Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p205e-0653.1
NC_000916:31459:415174151742203687Methanothermobacter thermautotrophicus str. Delta H, completeTPR-repeat-containing protein7e-0652.8
NC_010793:668500:684528684528685319792Orientia tsutsugamushi str. Ikeda, complete genomeTPR repeat-containing protein 058e-0652.8
NC_013851:2211120:2230538223053822329342397Allochromatium vinosum DSM 180 chromosome, complete genomeMethyltransferase type 118e-0652.4
NC_014216:2054860:2080319208031920826822364Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeTPR repeat-containing protein9e-0652.4