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Query: NC_008228:3608909:3613082 Pseudoalteromonas atlantica T6c, complete genome

Start: 3613082, End: 3613846, Length: 765

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020409:77414:816978169782452756Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeconserved exported protein of unknown function3e-1892.4
NC_014541:1280835:129557112955711296344774Ferrimonas balearica DSM 9799 chromosome, complete genomehypothetical protein2e-70265
NC_014315:2659479:268068226806822681458777Nitrosococcus watsoni C-113 chromosome, complete genomehypothetical protein7e-42170
NC_009052:1899954:191968519196851920467783Shewanella baltica OS155, complete genomehypothetical protein2e-61235
NC_011663:3181579:318575131857513186533783Shewanella baltica OS223 chromosome, complete genomehypothetical protein2e-61236
NC_009092:2902171:291254129125412913323783Shewanella loihica PV-4, complete genomehypothetical protein5e-58224
NC_008577:3125675:313041131304113131193783Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein6e-61234
NC_008321:2922000:292677329267732927555783Shewanella sp. MR-4, complete genomehypothetical protein2e-61235
NC_008322:2983951:299059729905972991379783Shewanella sp. MR-7, complete genomehypothetical protein2e-61235
NC_014012:3356629:335955133595513360333783Shewanella violacea DSS12, complete genomehypothetical protein5e-57221