Pre_GI: BLASTP Hits

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Query: NC_008228:3608909:3611724 Pseudoalteromonas atlantica T6c, complete genome

Start: 3611724, End: 3613076, Length: 1353

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014541:1280835:1296344129634412977021359Ferrimonas balearica DSM 9799 chromosome, complete genomeouter membrane transport energization protein ExbB4e-127454
NC_011663:3181579:3184396318439631857511356Shewanella baltica OS223 chromosome, complete genomeMotA/TolQ/ExbB proton channel5e-114411
NC_009052:1899954:1920467192046719218221356Shewanella baltica OS155, complete genomeMotA/TolQ/ExbB proton channel1e-113410
NC_008322:2983951:2989242298924229905971356Shewanella sp. MR-7, complete genomeMotA/TolQ/ExbB proton channel2e-113409
NC_008321:2922000:2925418292541829267731356Shewanella sp. MR-4, complete genomeMotA/TolQ/ExbB proton channel1e-112406
NC_008577:3125675:3129056312905631304111356Shewanella sp. ANA-3 chromosome 1, complete sequenceMotA/TolQ/ExbB proton channel2e-112405
NC_009092:2902171:2911186291118629125411356Shewanella loihica PV-4, complete genomeMotA/TolQ/ExbB proton channel2e-107389
NC_014012:3356629:3358196335819633595511356Shewanella violacea DSS12, complete genomeMotA/TolQ/ExbB proton channel family protein2e-104379
NC_014315:2659479:2679240267924026806851446Nitrosococcus watsoni C-113 chromosome, complete genomeMotA/TolQ/ExbB proton channel4e-89328
NC_020409:77414:8027380273817001428Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeMotA/TolQ/ExbB proton channel2e-34147
NC_006138:3355028:3362945336294533643361392Desulfotalea psychrophila LSv54, complete genomesimilar to transport protein TolQ3e-25116
NC_006138:3355028:336241233624123362936525Desulfotalea psychrophila LSv54, complete genomesimilar to biopolymer transport protein (ExbB)4e-1479.7
NC_020409:77414:796547965480286633Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeMotA/TolQ/ExbB proton channel4e-1376.6
NC_014761:1321187:134194013419401342560621Oceanithermus profundus DSM 14977 chromosome, complete genomemota/tolq/exbb proton channel6e-1375.9
NC_012440:1874896:187489618748961875537642Persephonella marina EX-H1, complete genomeMotA/TolQ/ExbB proton channel family protein1e-1171.2
NC_012997:4114526:414212041421204142857738Teredinibacter turnerae T7901, complete genomeATPase3e-1170.1
NC_014541:1280835:129770512977051298229525Ferrimonas balearica DSM 9799 chromosome, complete genomeouter membrane transport energization protein ExbB4e-1169.7
NC_014315:2659479:267873226787322679256525Nitrosococcus watsoni C-113 chromosome, complete genomeMotA/TolQ/ExbB proton channel2e-1067.8
NC_002977:652481:668226668226668840615Methylococcus capsulatus str. Bath, complete genomeMotA/TolQ/ExbB proton channel family domain protein2e-1067.4
NC_014008:354292:355368355368356129762Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeMotA/TolQ/ExbB proton channel3e-1067
NC_015276:2171355:217382821738282174442615Marinomonas mediterranea MMB-1 chromosome, complete genomeMotA/TolQ/ExbB proton channel3e-1067
NC_013520:91961:113003113003113614612Veillonella parvula DSM 2008, complete genomeMotA/TolQ/ExbB proton channel3e-1066.6
NC_009484:1299500:132555413255541326225672Acidiphilium cryptum JF-5 chromosome, complete genomeMotA/TolQ/ExbB proton channel3e-0963.9
NC_014733:107394:132519132519133229711Methylovorus sp. MP688 chromosome, complete genomemota/tolq/exbb proton channel2e-0963.9
NC_015574:228948:241203241203242042840Methanobacterium sp. SWAN-1 chromosome, complete genomeMotA/TolQ/ExbB proton channel5e-0962.8
NC_008228:3608909:361119836111983611722525Pseudoalteromonas atlantica T6c, complete genomeMotA/TolQ/ExbB proton channel6e-0962.4
NC_016147:1788219:178865217886521789281630Pseudoxanthomonas spadix BD-a59 chromosome, complete genomebiopolymer transport protein6e-0962.4
NC_015311:1101761:111909911190991119917819Prevotella denticola F0289 chromosome, complete genomeMotA/TolQ/ExbB proton channel family transporter1e-0861.6
NC_013421:4714478:475475847547584755474717Pectobacterium wasabiae WPP163, complete genomeMotA/TolQ/ExbB proton channel2e-0861.2
NC_009092:2902171:291065929106592911186528Shewanella loihica PV-4, complete genomeMotA/TolQ/ExbB proton channel3e-0860.5
NC_015711:346436:355393355393356076684Myxococcus fulvus HW-1 chromosome, complete genomeMotA/TolQ/ExbB proton channel family protein2e-0860.5
NC_011663:3181579:318386931838693184396528Shewanella baltica OS223 chromosome, complete genomeMotA/TolQ/ExbB proton channel3e-0860.1
NC_008095:1697157:170613717061371706820684Myxococcus xanthus DK 1622, complete genometransporter, MotA/TolQ/ExbB proton channel family3e-0860.1
NC_014012:3356629:335766933576693358196528Shewanella violacea DSS12, complete genomeTonB system transport protein ExbB24e-0859.7
NC_008322:2983951:298871529887152989242528Shewanella sp. MR-7, complete genomeMotA/TolQ/ExbB proton channel5e-0859.7
NC_008577:3125675:312852931285293129056528Shewanella sp. ANA-3 chromosome 1, complete sequenceMotA/TolQ/ExbB proton channel5e-0859.7
NC_008321:2922000:292489129248912925418528Shewanella sp. MR-4, complete genomeMotA/TolQ/ExbB proton channel5e-0859.3
NC_020126:1830147:183711518371151837798684Myxococcus stipitatus DSM 14675, complete genomeMotA/TolQ/ExbB proton channel family protein8e-0858.9
NC_011206:1917408:193473219347321935409678Acidithiobacillus ferrooxidans ATCC 53993, complete genomeMotA/TolQ/ExbB proton channel8e-0858.9
NC_011761:2031876:204920020492002049877678Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeMotA/TolQ/ExbB proton channel family protein8e-0858.9
NC_009052:1899954:192182219218221922349528Shewanella baltica OS155, complete genomeMotA/TolQ/ExbB proton channel1e-0758.5
NC_008027:5576458:559542955954295596151723Pseudomonas entomophila L48, complete genomebiopolymer transport protein ExbB1e-0758.2
NC_007760:308500:311883311883312641759Anaeromyxobacter dehalogenans 2CP-C, complete genomeMotA/TolQ/ExbB proton channel8e-0755.5
NC_011891:315182:322974322974323732759Anaeromyxobacter dehalogenans 2CP-1, complete genomeMotA/TolQ/ExbB proton channel8e-0755.5
NC_011145:306623:314420314420315178759Anaeromyxobacter sp. K, complete genomeMotA/TolQ/ExbB proton channel8e-0755.5
NC_011296:909558:929880929880930509630Thermodesulfovibrio yellowstonii DSM 11347, complete genomeTolQ protein8e-0755.5
NC_010278:1749579:175871617587161759384669Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,biopolymer transport ExbB protein1e-0654.7
NC_010939:1809446:182187818218781822546669Actinobacillus pleuropneumoniae serovar 7 str. AP76, completebiopolymer transport ExbB protein1e-0654.7
NC_009053:1785447:179799017979901798658669Actinobacillus pleuropneumoniae L20, complete genomebiopolymer transport ExbB protein1e-0654.7
NC_011071:10842:116061160612367762Stenotrophomonas maltophilia R551-3, complete genomeMotA/TolQ/ExbB proton channel3e-0653.5
NC_008011:860000:874438874438875115678Lawsonia intracellularis PHE/MN1-00, complete genomeBiopolymer transport proteins3e-0653.5
NC_010943:9294:113881138812149762Stenotrophomonas maltophilia K279a, complete genomeputative biopolymer transport exbB protein3e-0653.5
NC_014150:648868:655326655326655955630Brachyspira murdochii DSM 12563 chromosome, complete genomeMotA/TolQ/ExbB proton channel5e-0653.1
NC_013520:1936209:195397819539781954589612Veillonella parvula DSM 2008, complete genomeMotA/TolQ/ExbB proton channel5e-0652.8
NC_008783:145305:159746159746160453708Bartonella bacilliformis KC583, complete genomeprotein TolQ6e-0652.8
NC_004757:230541:249426249426250130705Nitrosomonas europaea ATCC 19718, complete genomeMotA/TolQ/ExbB proton channel family6e-0652.4
NC_004578:4465247:448230844823084483003696Pseudomonas syringae pv. tomato str. DC3000, complete genometolQ protein7e-0652.4
NC_010577:1:113351133512099765Xylella fastidiosa M23, complete genomeMotA/TolQ/ExbB proton channel7e-0652.4
NC_004556:1:114441144412208765Xylella fastidiosa Temecula1, complete genomebiopolymer transport ExbB protein7e-0652.4
NC_002488:1:114641146412228765Xylella fastidiosa 9a5c, complete genomebiopolymer transport ExbB protein9e-0652
NC_008576:4467745:447472144747214475332612Magnetococcus sp. MC-1, complete genomeMotA/TolQ/ExbB proton channel9e-0652