Pre_GI: BLASTP Hits

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Query: NC_008228:3608909:3610168 Pseudoalteromonas atlantica T6c, complete genome

Start: 3610168, End: 3610782, Length: 615

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014012:3356629:335662933566293357249621Shewanella violacea DSS12, complete genomeTonB2 protein2e-46185
NC_009092:2902171:290962229096222910239618Shewanella loihica PV-4, complete genomeTonB family protein7e-46183
NC_014541:1280835:129864812986481299262615Ferrimonas balearica DSM 9799 chromosome, complete genomeouter membrane transport energization protein TonB1e-45182
NC_009052:1899954:192276919227691923389621Shewanella baltica OS155, complete genomeTonB family protein5e-45180
NC_008577:3125675:312748631274863128109624Shewanella sp. ANA-3 chromosome 1, complete sequenceTonB family protein1e-44179
NC_008321:2922000:292384829238482924471624Shewanella sp. MR-4, complete genomeTonB family protein3e-44177
NC_008322:2983951:298767229876722988295624Shewanella sp. MR-7, complete genomeTonB family protein3e-44177
NC_011663:3181579:318282931828293183449621Shewanella baltica OS223 chromosome, complete genomeTonB family protein5e-44177
NC_018679:2211000:222962722296272230319693Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeTonB family protein2e-28125
NC_014315:2659479:267766626776662678319654Nitrosococcus watsoni C-113 chromosome, complete genomeTonB family protein1e-1169.7
NC_018679:2541986:255273925527392553098360Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeTonB family protein6e-1167.4
NC_010995:1139867:115670411567041157363660Cellvibrio japonicus Ueda107, complete genomeTonB22e-0859.3
NC_013943:1019213:101857510185751019255681Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeTonB family protein6e-0857.4
NC_012779:1629731:164020816402081641059852Edwardsiella ictaluri 93-146, complete genomeprotein TonB1e-0756.2
NC_010473:1384000:139850913985091399228720Escherichia coli str. K-12 substr. DH10B, complete genomemembrane spanning protein in TonB-ExbB-ExbD complex2e-0652
NC_009801:1392696:141428814142881415007720Escherichia coli E24377A, complete genomeprotein tonB3e-0652
NC_007384:2007467:200790520079052008624720Shigella sonnei Ss046, complete genomeTonB3e-0652
NC_013364:1997891:200214320021432002862720Escherichia coli O111:H- str. 11128, complete genomemembrane spanning protein TonB3e-0652