Pre_GI: BLASTP Hits

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Query: NC_008228:2295841:2298773 Pseudoalteromonas atlantica T6c, complete genome

Start: 2298773, End: 2299240, Length: 468

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005139:796546:799117799117799554438Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein6e-22102
NC_004459:349500:395957395957396367411Vibrio vulnificus CMCP6 chromosome I, complete sequencehypothetical protein2e-2097.8
NC_016609:4834378:483437848343784834845468Niastella koreensis GR20-10 chromosome, complete genomeYHS domain-containing protein1e-1789
NC_014414:167803:180094180094180543450Parvularcula bermudensis HTCC2503 chromosome, complete genomehypothetical protein7e-1372.8
NC_008228:2068641:206943220694322069965534Pseudoalteromonas atlantica T6c, complete genomeYHS3e-0960.8