Pre_GI: BLASTP Hits

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Query: NC_008228:2295841:2295841 Pseudoalteromonas atlantica T6c, complete genome

Start: 2295841, End: 2296905, Length: 1065

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006300:1624254:1627530162753016286421113Mannheimia succiniciproducens MBEL55E, complete genomeMrp protein5e-81301
NC_014500:1491660:1491660149166014927691110Dickeya dadantii 3937 chromosome, complete genomeantiporter inner membrane protein1e-77290
NC_015723:961909:9779119779119789991089Cupriavidus necator N-1 chromosome 2, complete sequencechromosome partitioning ATPase4e-77288
NC_012731:3593000:3609811360981136109201110Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative ATPase5e-77288
NC_009792:642881:6481396481396492481110Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-76286
NC_002655:2925787:2939020293902029401591140Escherichia coli O157:H7 EDL933, complete genomeputative ATPase4e-76285
NC_011750:955451:9621369621369632451110Escherichia coli IAI39 chromosome, complete genomeputative ATPase8e-76284
NC_008258:2190635:2201665220166522027741110Shigella flexneri 5 str. 8401, complete genomeputative ATPase8e-76284
AC_000091:2185369:2196393219639321975021110Escherichia coli W3110 DNA, complete genomeantiporter inner membrane protein8e-76284
NC_000913:2180855:2191081219108121921901110Escherichia coli K12, complete genomeantiporter inner membrane protein8e-76284
CP002185:2347413:2361652236165223627611110Escherichia coli W, complete genomeantiporter inner membrane protein8e-76284
CU928160:2239637:2252600225260022537091110Escherichia coli IAI1 chromosome, complete genomeantiporter inner membrane protein8e-76284
NC_009800:2225182:2235408223540822365171110Escherichia coli HS, complete genomemrp protein8e-76284
NC_007712:1601499:1601499160149916026081110Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein8e-76284
NC_010473:2267851:2282089228208922831981110Escherichia coli str. K-12 substr. DH10B, complete genomeantiporter inner membrane protein8e-76284
NC_010468:1694729:1700829170082917019381110Escherichia coli ATCC 8739, complete genomeputative ATPase8e-76284
NC_002695:2854629:2868789286878928698981110Escherichia coli O157:H7 str. Sakai, complete genomeputative ATPase8e-76284
NC_007384:2251792:2265465226546522666041140Shigella sonnei Ss046, complete genomeputative ATPase7e-76284
NC_011745:2399313:2412279241227924133881110Escherichia coli ED1a chromosome, complete genomeputative ATPase7e-76284
NC_011740:2220251:2242805224280522439141110Escherichia fergusonii ATCC 35469, complete genomeantiporter inner membrane protein7e-76284
NC_016822:2341127:2354834235483423559431110Shigella sonnei 53G, complete genomeantiporter inner membrane protein8e-76284
NC_013008:2851342:2864581286458128656901110Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeATPase8e-76284
NC_012759:2069326:2083564208356420846731110Escherichia coli BW2952 chromosome, complete genomeputative ATPase8e-76284
NC_011741:2239637:2252600225260022537091110Escherichia coli IAI1 chromosome, complete genomeputative ATPase8e-76284
NC_011353:2852362:2865600286560028667091110Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeATPase8e-76284
NC_004337:2185282:2200123220012322012321110Shigella flexneri 2a str. 301, complete genomeputative ATPase2e-75282
NC_004741:2169877:2180871218087121819801110Shigella flexneri 2a str. 2457T, complete genomeputative ATPase2e-75282
NC_017328:2225418:2240219224021922413281110Shigella flexneri 2002017 chromosome, complete genomeputative ATPase2e-75282
NC_009778:1070000:1082903108290310840121110Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein5e-75281
NC_020260:1111130:1124991112499111261001110Cronobacter sakazakii Sp291, complete genomeantiporter inner membrane protein5e-75281
NC_011761:2344408:2363652236365223647281077Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeMrp protein2e-74279
NC_011206:2239109:2258353225835322594291077Acidithiobacillus ferrooxidans ATCC 53993, complete genomeATP-binding protein involved in chromosome partitioning2e-74279
NC_015566:1659288:1659288165928816604001113Serratia sp. AS12 chromosome, complete genomeParA/MinD ATPase-like protein4e-74278
NC_013508:1289159:1289159128915912902711113Edwardsiella tarda EIB202, complete genomeputative ATPase4e-74278
NC_017047:1862893:1862893186289318640051113Rahnella aquatilis HX2 chromosome, complete genomeantiporter inner membrane protein1e-73277
NC_015061:1902251:1902251190225119033631113Rahnella sp. Y9602 chromosome, complete genomeATPase-like, ParA/MinD1e-73277
NC_015559:2434000:2453857245385724549391083Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeParA/MinD ATPase-like protein1e-72273
NC_014315:2239725:2256983225698322580801098Nitrosococcus watsoni C-113 chromosome, complete genomeATPase-like protein4e-70265
NC_009654:1729159:1731476173147617325461071Marinomonas sp. MWYL1, complete genomeParA family protein6e-69261
NC_013202:1492434:1492823149282314938871065Halomicrobium mukohataei DSM 12286, complete genomeprotein of unknown function DUF592e-60232
NC_017272:607900:6246796246796257311053Thermus thermophilus SG0.5JP17-16 chromosome, complete genomeParA/MinD-like ATPase3e-59229
NC_017271:3057161:308292930829293083780852Xanthomonas campestris pv. raphani 756C chromosome, completehypothetical protein2e-59229
NC_006461:605249:6213006213006223521053Thermus thermophilus HB8, complete genomeATP-binding protein, Mrp/Nbp35 family9e-59227
NC_005835:259702:2834612834612845131053Thermus thermophilus HB27, complete genomemrp protein1e-58227
NC_008817:1538507:1555904155590415569711068Prochlorococcus marinus str. MIT 9515, complete genomeMrp7e-55214
NC_005090:1812833:1838243183824318393551113Wolinella succinogenes DSM 1740, complete genomePUTATIVE ATP/GTP-BINDING PROTEIN (MRP HOMOLOG)4e-54211
NC_016776:4525065:4532969453296945340751107Bacteroides fragilis 638R, complete genomehypothetical protein9e-54211
NC_006347:4562242:4566010456601045671161107Bacteroides fragilis YCH46, complete genomeMrp/Nbp35 family ATP-binding protein9e-54211
NC_003228:4449072:4452840445284044539461107Bacteroides fragilis NCTC 9343, complete genomehypothetical protein9e-54211
NC_011126:1241655:1258032125803212590751044Hydrogenobaculum sp. Y04AAS1, complete genomeMrp protein1e-53210
NC_015311:2235550:2253015225301522541181104Prevotella denticola F0289 chromosome, complete genomemrp-like family protein4e-53208
NC_015587:1232642:1249048124904812500911044Hydrogenobaculum sp. SHO chromosome, complete genomeATPase-like, ParA/MinD5e-53208
NC_015557:1232772:1249178124917812502211044Hydrogenobaculum sp. 3684 chromosome, complete genomeATPase-like, ParA/MinD5e-53208
NC_020411:1232962:1249373124937312504161044Hydrogenobaculum sp. HO, complete genomeATPase-like, ParA/MinD5e-53208
NC_007498:1848437:1856517185651718575601044Pelobacter carbinolicus DSM 2380, complete genomechromosome partitioning ATPase2e-52206
NC_019907:1060005:1065129106512910661901062Liberibacter crescens BT-1 chromosome, complete genomeScaffold protein for (4Fe-4S) cluster assembly ApbC, MRP-like protein3e-52206
NC_014166:228293:2333642333642344791116Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeParA/MinD-like ATPase7e-51201
NC_010118:133256:157949157949158728780Candidatus Sulcia muelleri GWSS, complete genomeMrp/Nbp35 family ATP-binding protein6e-51201
NC_014499:181000:1828341828341838441011Candidatus Sulcia muelleri CARI chromosome, complete genomeMrp/Nbp35 family ATP-binding protein1e-49196
NC_017358:220900:2240292240292251351107Helicobacter pylori Cuz20 chromosome, complete genomeATP-binding protein4e-49195
NC_007205:1:841184119286876Candidatus Pelagibacter ubique HTCC1062, complete genomeprobable ATPase9e-48191
NC_002689:78297:893918939190245855Thermoplasma volcanium GSS1, complete genomeATPase involved in chromosome partitioning2e-46186
NC_013887:245236:272404272404273276873Methanocaldococcus sp. FS406-22 chromosome, complete genomeATPase-like, ParA/MinD3e-46186
NC_012985:779279:7914627914627924871026Candidatus Liberibacter asiaticus str. psy62, complete genomehypothetical protein1e-45184
NC_008942:698353:714692714692715564873Methanocorpusculum labreanum Z, complete genomehypothetical protein1e-45183
NC_018643:937486:952002952002952826825Alpha proteobacterium HIMB5 chromosome, complete genomeParA/MinD ATPase like protein2e-44180
NC_014774:605085:6195556195556206011047Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completehypothetical protein2e-44179
NC_016077:8545:244782447825236759Acidaminococcus intestini RyC-MR95 chromosome, complete genomeATPase2e-43176
NC_014658:743453:763248763248764066819Methanothermus fervidus DSM 2088 chromosome, complete genomeatpase-like, para/mind3e-43176
NC_015574:2145000:216259621625962163444849Methanobacterium sp. SWAN-1 chromosome, complete genomeATPase-like, ParA/MinD4e-43175
NC_015499:1640500:1658857165885716600501194Thermodesulfobium narugense DSM 14796 chromosome, complete genomeATPase-like, ParA/MinD5e-42171
NC_016915:162841:164514164514165473960Rickettsia rickettsii str. Hlp#2 chromosome, complete genomeMrp protein9e-41167
NC_019897:329945:3308913308913319671077Thermobacillus composti KWC4 chromosome, complete genomechromosome partitioning ATPase2e-40166
NC_003030:3112931:311914131191413119974834Clostridium acetobutylicum ATCC 824, complete genomeMinD family ATPase (chromosome partitioning)3e-40166
NC_019791:638500:656766656766657704939Caldisphaera lagunensis DSM 15908 chromosome, complete genomechromosome partitioning ATPase4e-40165
NC_014551:157418:1582111582111592631053Bacillus amyloliquefaciens DSM 7, complete genomeMRP family regulator SalA1e-39164
NC_016512:679688:7005277005277016871161Propionibacterium acnes TypeIA2 P.acn17 chromosome, completemrp family protein1e-39164
NC_009881:166500:168129168129169091963Rickettsia akari str. Hartford, complete genomeMrp protein1e-39163
NC_016511:678582:7011427011427023021161Propionibacterium acnes TypeIA2 P.acn31 chromosome, completemrp family protein3e-39162
NC_002937:1915787:191578719157871916680894Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehypothetical protein3e-39162
NC_017295:3110748:311839831183983119231834Clostridium acetobutylicum EA 2018 chromosome, complete genomeMinD family ATPase4e-39162
NC_013173:1231213:123532412353241236232909Desulfomicrobium baculatum DSM 4028, complete genomehypothetical protein7e-39161
NC_020409:329915:332192332192333076885Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completehypothetical protein2e-38160
NC_016629:3629848:364455336445533645440888Desulfovibrio africanus str. Walvis Bay chromosome, completeParA/MinD-like ATPase1e-38160
NC_012658:99899:116425116425117267843Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative MRP protein9e-39160
NC_009617:68779:833228332284161840Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeMrp/NBP35 ATP-binding family protein3e-38159
NC_017066:140853:144279144279145235957Rickettsia typhi str. TH1527 chromosome, complete genomeATP-binding protein Mrp7e-38158
NC_017062:141270:144696144696145652957Rickettsia typhi str. B9991CWPP chromosome, complete genomeATP-binding protein Mrp7e-38158
NC_006142:140853:144279144279145235957Rickettsia typhi str. Wilmington, complete genomeATP-binding protein Mrp7e-38158
NC_014376:2921769:294623629462362947090855Clostridium saccharolyticum WM1 chromosome, complete genomeATPase-like, ParA/MinD4e-37155
NC_017048:484000:485913485913486869957Rickettsia prowazekii str. GvV257 chromosome, complete genomehypothetical protein2e-36153
NC_017049:140000:141948141948142904957Rickettsia prowazekii str. Chernikova chromosome, complete genomehypothetical protein2e-36153
NC_017050:141500:143747143747144703957Rickettsia prowazekii str. Katsinyian chromosome, complete genomehypothetical protein2e-36153
NC_017051:140000:141951141951142907957Rickettsia prowazekii str. Dachau chromosome, complete genomehypothetical protein2e-36153
NC_017056:141500:143757143757144713957Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomehypothetical protein2e-36153
NC_017057:142000:143969143969144925957Rickettsia prowazekii str. RpGvF24 chromosome, complete genomehypothetical protein2e-36153
NC_020291:79502:836828368284521840Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeATPase involved in chromosome partitioning2e-36153
NC_000963:141500:143749143749144705957Rickettsia prowazekii str. Madrid E, complete genomehypothetical protein2e-36153
NC_016885:2091918:213025721302572131183927Pyrobaculum oguniense TE7 chromosome, complete genomeATPase3e-36152
NC_013009:809681:811371811371812111741Neorickettsia risticii str. Illinois, complete genomeMrp protein6e-36151
NC_016929:141972:1430571430571441631107Rickettsia canadensis str. CA410 chromosome, complete genomeMrp protein3e-35149
NC_009879:141000:1420991420991432051107Rickettsia canadensis str. McKiel, complete genomeMrp protein3e-35149
NC_017208:108134:1504441504441515111068Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeMrp protein4e-35149
NC_014171:109280:1483951483951494621068Bacillus thuringiensis BMB171 chromosome, complete genomeMrp protein7e-35148
NC_016645:1838405:188680818868081887734927Pyrobaculum sp. 1860 chromosome, complete genomenucleotide binding protein 27e-35148
NC_017078:179848:200175200175201008834Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1,putative ATP-binding protein3e-34146
NC_018704:176088:1805921805921816261035Amphibacillus xylanus NBRC 15112, complete genomeputative SalA protein6e-34145
NC_004193:205278:2101832101832112411059Oceanobacillus iheyensis HTE831, complete genomeATP-binding Mrp-like protein2e-33143
NC_012673:1540000:1555724155572415567551032Exiguobacterium sp. AT1b, complete genomemrp protein5e-33142
NC_011567:139598:1408841408841418911008Anoxybacillus flavithermus WK1, complete genomeMrp protein, an ATPase involved in chromosome partitioning2e-32139
NC_012121:1676367:1690035169003516911021068Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein3e-31135
NC_014328:4073714:409957740995774100407831Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative nucleotide-binding protein4e-31135
NC_015500:1236874:125543912554391256269831Treponema brennaborense DSM 12168 chromosome, complete genomeATPase-like, ParA/MinD5e-31135
NC_016048:1390463:139046313904631391293831Oscillibacter valericigenes Sjm18-20, complete genomeputative Mrp family protein6e-31135
NC_011773:3399531:3405214340521434062631050Bacillus cereus AH820 chromosome, complete genomemrp protein7e-29128
NC_014829:178000:1796471796471806961050Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeATPase-like, ParA/MinD6e-29128
NC_003997:3320906:3325494332549433265431050Bacillus anthracis str. Ames, complete genomemrp protein5e-29128
NC_005945:3321600:3326188332618833272371050Bacillus anthracis str. Sterne, complete genomemrp protein5e-29128
NC_007530:3321033:3325621332562133266701050Bacillus anthracis str. 'Ames Ancestor', complete genomemrp protein5e-29128
NC_012581:897957:9120729120729131211050Bacillus anthracis str. CDC 684 chromosome, complete genomemrp protein5e-29128
NC_012659:3320933:3325521332552133265701050Bacillus anthracis str. A0248, complete genomemrp protein5e-29128
NC_018870:2316499:236850423685042369343840Thermacetogenium phaeum DSM 12270 chromosome, complete genomeParA/MinD-like ATPase9e-29127
NC_014616:862084:8685878685878697171131Bifidobacterium bifidum S17 chromosome, complete genomechromosome partitioning ATP-binding protein2e-28126
NC_010556:141374:1452301452301462611032Exiguobacterium sibiricum 255-15, complete genomeATP-binding Mrp protein3e-28125
NC_018665:139646:1451691451691462001032Exiguobacterium antarcticum B7 chromosome, complete genomeATP-binding Mrp protein1e-26120
NC_014471:1841171:184229818422981843098801Ignisphaera aggregans DSM 17230 chromosome, complete genomeATPase-like, ParA/MinD3e-26119
NC_013929:4549988:456229045622904563036747Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein2e-23109
NC_019942:987134:104391810439181044640723Aciduliprofundum sp. MAR08-339, complete genomeATPase involved in chromosome partitioning3e-1893.2
NC_014961:445717:450601450601451326726Desulfurococcus mucosus DSM 2162 chromosome, complete genomeParA/MinD-like ATPase8e-1478.2
NC_000909:467607:483625483625484419795Methanocaldococcus jannaschii DSM 2661, complete genomecell division inhibitor minD2e-0653.9
NC_013156:728397:746160746160746975816Methanocaldococcus fervens AG86, complete genomecell division ATPase MinD2e-0653.5