Pre_GI: BLASTP Hits

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Query: NC_008228:2068641:2079168 Pseudoalteromonas atlantica T6c, complete genome

Start: 2079168, End: 2079488, Length: 321

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012559:854507:889234889234889743510Laribacter hongkongensis HLHK9, complete genomeNADH oxidase1e-0755.1
NC_009512:3068495:3076035307603530772911257Pseudomonas putida F1, complete genomeNADH:flavin oxidoreductase/NADH oxidase2e-0754.3
NC_017986:5467279:5474292547429254755481257Pseudomonas putida ND6 chromosome, complete genomeNADH:flavin oxidoreductase/NADH oxidase2e-0754.3
NC_004129:3965947:3966355396635539675871233Pseudomonas fluorescens Pf-5, complete genomeoxidoreductase, FMN-binding3e-0753.9
NC_003296:140889:1580001580001592351236Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE NADH OXIDASE-RELATED OXIDOREDUCTASE PROTEIN3e-0650.8