Pre_GI: BLASTP Hits

Some Help

Query: NC_008228:1404126:1431559 Pseudoalteromonas atlantica T6c, complete genome

Start: 1431559, End: 1432641, Length: 1083

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014831:786011:7877447877447888921149Thermaerobacter marianensis DSM 12885 chromosome, complete genomeglycosyl transferase group 12e-41170
NC_015174:5157355:5162540516254051636041065Planctomyces brasiliensis DSM 5305 chromosome, complete genomeglycosyl transferase group 11e-35150
NC_013524:1207845:1211575121157512127471173Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeglycosyl transferase group 15e-28125
NC_019978:2396000:2398349239834923994431095Halobacteroides halobius DSM 5150, complete genomeglycosyltransferase1e-26121
NC_009664:3245210:3249933324993332510601128Kineococcus radiotolerans SRS30216, complete genomeglycosyl transferase group 11e-26120
NC_008312:6347500:6362652636265263637011050Trichodesmium erythraeum IMS101, complete genomeglycosyl transferase, group 13e-25116
NC_007947:2140000:2154294215429421554421149Methylobacillus flagellatus KT, complete genomeglycosyl transferase, group 12e-20100
NC_011138:1374520:1390259139025913913441086Alteromonas macleodii 'Deep ecotype', complete genomepredicted glycosyltransferase5e-2099
NC_014216:2127370:2138211213821121406072397Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeglycosyl transferase family 21e-1894
NC_007086:1988000:2002280200228020033291050Xanthomonas campestris pv. campestris str. 8004, complete genomeGumI protein1e-1790.9
NC_003902:2903493:2907890290789029089391050Xanthomonas campestris pv. campestris str. ATCC 33913, completeGumI protein1e-1790.9
NC_017271:2906000:2910424291042429114731050Xanthomonas campestris pv. raphani 756C chromosome, completeexopolysaccharide xanthan biosynthesis glycosyltransferase GumI1e-1790.9
NC_018679:4028412:4035220403522040375892370Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeglycosyl transferase family 22e-1687
NC_009484:661089:6638776638776650191143Acidiphilium cryptum JF-5 chromosome, complete genomegroup 1 glycosyl transferase2e-1686.7
NC_014830:1252249:1265171126517112662351065Intrasporangium calvum DSM 43043 chromosome, complete genomehypothetical protein6e-1582
NC_015320:470988:4907064907064918571152Archaeoglobus veneficus SNP6 chromosome, complete genomegroup 1 glycosyl transferase3e-1376.3
NC_015186:755000:7560277560277571691143Acidiphilium multivorum AIU301, complete genomeputative glycosyltransferase7e-1271.6
NC_007796:3116293:3139661313966131408271167Methanospirillum hungatei JF-1, complete genomeglycosyl transferase, group 12e-1170.1
NC_013741:424278:4370554370554381941140Archaeoglobus profundus DSM 5631, complete genomeglycosyl transferase group 11e-1067.8
NC_016604:1285277:1300310130031013013981089Mycobacterium rhodesiae NBB3 chromosome, complete genomehypothetical protein4e-1065.9
NC_017079:261736:2928902928902941131224Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeputative glycosyltransferase1e-0964.3
NC_013967:1878045:1901202190120219023201119Haloferax volcanii DS2 chromosome, complete genomelipopolysaccharide transferase family protein2e-0963.5
NC_008825:747756:7495787495787507681191Methylibium petroleiphilum PM1, complete genomeglycosyltransferase-like protein1e-0861.2
NC_011832:2306341:2324322232432223254551134Candidatus Methanosphaerula palustris E1-9c, complete genomeglycosyl transferase group 12e-0860.5
NC_017068:638868:6477586477586488911134Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative glycosyl transferase family 1 protein3e-0859.7
NC_014814:4235477:4276073427607342771911119Mycobacterium sp. Spyr1 chromosome, complete genomeglycosyltransferase5e-0858.9
NC_009464:1479174:1502079150207915031371059Uncultured methanogenic archaeon RC-I, complete genomeglycosyltransferase (group 1)1e-0757.8
NC_016051:1429800:1442415144241514435961182Thermococcus sp. AM4 chromosome, complete genomeglycosyltransferase2e-0757
NC_019904:5241444:5251772525177252529621191Echinicola vietnamensis DSM 17526 chromosome, complete genomeglycosyltransferase2e-0757
NC_014375:1146328:1157122115712211582671146Brevundimonas subvibrioides ATCC 15264 chromosome, complete genomeglycosyl transferase group 13e-0756.2
NC_009615:3308538:3311023331102333121501128Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein4e-0755.8
NC_003901:775500:7780917780917792451155Methanosarcina mazei Go1, complete genomeglycosyltransferase6e-0755.5
NC_015680:1562535:1595454159545415964881035Pyrococcus yayanosii CH1 chromosome, complete genomegroup 1 glycosyl transferase8e-0755.1
NC_009523:1365717:1379801137980113809911191Roseiflexus sp. RS-1 chromosome, complete genomegroup 1 glycosyl transferase1e-0654.7
NC_015185:1296917:1303102130310213064943393Desulfurobacterium thermolithotrophum DSM 11699 chromosome,glycosyl transferase group 11e-0654.7
NC_013410:3280039:3290799329079932919531155Fibrobacter succinogenes subsp. succinogenes S85 chromosome,group 1 glycosyl transferase2e-0653.5
NC_015761:3611993:3618680361868036198251146Salmonella bongori NCTC 12419, complete genomelipopolysaccharide 1,2-N-acetylglucosaminetransferase3e-0653.1
NC_013716:4408201:4421592442159244227401149Citrobacter rodentium ICC168, complete genomelipopolysaccharide 1,2-N-acetylglucosaminetransferase3e-0653.1