Pre_GI: BLASTP Hits

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Query: NC_008228:1404126:1424979 Pseudoalteromonas atlantica T6c, complete genome

Start: 1424979, End: 1426571, Length: 1593

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019964:2680935:2702910270291027045411632Halovivax ruber XH-70, complete genomecholine dehydrogenase-like flavoprotein2e-1997.8
NC_012586:897148:9078059078059102912487Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceFAD dependent oxidoreductase4e-30133
NC_018145:50237:7055370553721901638Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completeFAD dependent oxidoreductase4e-1170.1
NC_016815:1543308:1561439156143915639252487Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequenceFAD dependent oxidoreductase6e-31135
NC_015955:616839:6392066392066408881683Halophilic archaeon DL31 plasmid phalar01, complete sequenceFAD dependent oxidoreductase3e-26120
NC_012856:798922:8168958168958185171623Ralstonia pickettii 12D chromosome 1, complete genomeglucose-methanol-choline oxidoreductase4e-1480.1
NC_013960:3379515:3402954340295434044651512Nitrosococcus halophilus Nc4 chromosome, complete genomeglucose-methanol-choline oxidoreductase3e-23110
NC_007484:495784:5014145014145030601647Nitrosococcus oceani ATCC 19707, complete genomeGlucose-methanol-choline oxidoreductase2e-0861.2
NC_011884:2051723:2074002207400220756391638Cyanothece sp. PCC 7425, complete genomeGMC oxidoreductase2e-58227
NC_016803:1027017:1050353105035310519601608Desulfovibrio desulfuricans ND132 chromosome, complete genomeGMC oxidoreductase5e-39162
NC_013501:1337489:1339796133979613414391644Rhodothermus marinus DSM 4252, complete genomeGMC oxidoreductase6e-58225
NC_011004:4045277:4043534404353440452821749Rhodopseudomonas palustris TIE-1, complete genomeGMC oxidoreductase4e-37156
NC_010505:4820000:4828936482893648315662631Methylobacterium radiotolerans JCM 2831, complete genomeNAD-dependent epimerase/dehydratase2e-43177
NC_005296:3783348:3781605378160537833531749Rhodopseudomonas palustris CGA009, complete genomepossible oxidoreductase5e-37156
NC_008825:2889933:2900099290009929018021704Methylibium petroleiphilum PM1, complete genomeputative oxidoreductase2e-52206
NC_017146:2416000:2433855243385524354921638Acetobacter pasteurianus IFO 3283-26, complete genomesolbitol dehydrogenase large subunit7e-1582.4
NC_017108:2413000:2431170243117024328071638Acetobacter pasteurianus IFO 3283-12, complete genomesolbitol dehydrogenase large subunit7e-1582.4
NC_017111:2413000:2431188243118824328251638Acetobacter pasteurianus IFO 3283-32, complete genomesolbitol dehydrogenase large subunit7e-1582.4
NC_017121:2413000:2431175243117524328121638Acetobacter pasteurianus IFO 3283-07, complete genomesolbitol dehydrogenase large subunit7e-1582.4
NC_013209:2414500:2432626243262624342631638Acetobacter pasteurianus IFO 3283-01, complete genomesolbitol dehydrogenase large subunit7e-1582.4
NC_017125:2415500:2433813243381324354501638Acetobacter pasteurianus IFO 3283-22, complete genomesolbitol dehydrogenase large subunit7e-1582.4
NC_017100:2414075:2433833243383324354701638Acetobacter pasteurianus IFO 3283-03, complete genomesolbitol dehydrogenase large subunit7e-1582.4