Pre_GI: BLASTP Hits

Some Help

Query: NC_008228:1404126:1416195 Pseudoalteromonas atlantica T6c, complete genome

Start: 1416195, End: 1417094, Length: 900

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015931:618445:626273626273627235963Pyrolobus fumarii 1A, complete genomeFkbM family methyltransferase2e-1066.6
NC_007775:1002934:1020398102039810242493852Synechococcus sp. JA-3-3Ab, complete genomemethyltransferase, FkbM family3e-1066.2
NC_007776:474361:4856834856834893183636Synechococcus sp. JA-2-3B'a(2-13), complete genomemethyltransferase, FkbM family3e-1065.9
NC_014394:1373602:138976513897651390676912Gallionella capsiferriformans ES-2 chromosome, complete genomemethyltransferase FkbM family3e-0962.8
NC_007761:781210:806935806935807684750Rhizobium etli CFN 42, complete genomelipopolysaccharide biosynthesis protein (SAM-dependent methyltransferase protein)7e-0961.6
NC_013967:1375255:138555313855531386272720Haloferax volcanii DS2 chromosome, complete genomemethyltransferase AglP8e-0961.2
NC_017904:3415700:343988934398893440575687Mycobacterium sp. MOTT36Y chromosome, complete genomeFkbM family methyltransferase1e-0860.8
NC_013743:3020687:303259730325973033412816Haloterrigena turkmenica DSM 5511, complete genomemethyltransferase FkbM family2e-0860.5
NC_014729:1627620:164151316415131642238726Halogeometricum borinquense DSM 11551 chromosome, complete genomemethyltransferase, fkbm family2e-0860.5
NC_002755:3282785:330190033019003302874975Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein4e-0858.9
NC_008769:3242453:326174132617413262706966Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein4e-0858.9
NC_012207:3237440:325456832545683255533966Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein4e-0858.9
NC_002945:3246278:326426832642683265233966Mycobacterium bovis AF2122/97, complete genomehypothetical protein4e-0858.9
NC_016804:3221818:324110632411063242071966Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein4e-0858.9
NC_009565:3299937:331905333190533320018966Mycobacterium tuberculosis F11, complete genomehypothetical protein4e-0858.9
NC_009525:3300456:331957233195723320537966Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein4e-0858.9
NC_015848:3343731:336420133642013365166966Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein4e-0858.9
NC_000962:3288464:330758033075803308545966Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein4e-0858.9
NC_017026:3282405:330152533015253302490966Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein4e-0858.9
NC_019950:3306419:332851033285103329301792Mycobacterium canettii CIPT 140060008 complete genomehypothetical protein7e-0858.2
NC_015578:61820:722217222173042822Treponema primitia ZAS-2 chromosome, complete genomemethyltransferase FkbM family1e-0757.8
NC_020210:3169258:3184073318407331852451173Geobacillus sp. GHH01, complete genomeputative methyltransferase FkbM-family1e-0757.8
NC_015496:2279829:230194423019442302819876Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomemethyltransferase FkbM family1e-0757.4
NC_020541:625925:632216632216632980765Rhodanobacter sp. 2APBS1, complete genomemethyltransferase, FkbM family1e-0757.4
NC_014205:842314:857464857464858288825Staphylothermus hellenicus DSM 12710 chromosome, complete genomemethyltransferase FkbM family3e-0756.2
NC_015510:3641676:364989836498983650773876Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeFkbM family methyltransferase4e-0755.8
NC_005027:1304887:130488713048871305777891Rhodopirellula baltica SH 1, complete genomeconserved hypothetical protein-putative methyltransferase7e-0755.1
NC_010717:4626178:464146146414614642261801Xanthomonas oryzae pv. oryzae PXO99A, complete genomeputative methyltransferase7e-0755.1
NC_006834:787500:793593793593794393801Xanthomonas oryzae pv. oryzae KACC10331, complete genomehypothetical protein7e-0754.7
NC_016629:1111619:113694311369431137827885Desulfovibrio africanus str. Walvis Bay chromosome, completeFkbM family methyltransferase1e-0654.3
NC_015666:1623790:164442316444231645262840Halopiger xanaduensis SH-6 chromosome, complete genomeFkbM family methyltransferase1e-0653.9
NC_007705:755948:762025762025762753729Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomehypothetical protein1e-0653.9
NC_002607:795777:812621812621813382762Halobacterium sp. NRC-1, complete genomehypothetical protein5e-0652
NC_010364:787766:804610804610805371762Halobacterium salinarum R1, complete genomehypothetical protein5e-0652
NC_011884:5019500:503623650362365037066831Cyanothece sp. PCC 7425, complete genomemethyltransferase FkbM family5e-0652
NC_009921:2565640:257128325712832572248966Frankia sp. EAN1pec, complete genomemethyltransferase FkbM family9e-0651.2