Pre_GI: BLASTP Hits

Some Help

Query: NC_008228:1404126:1405719 Pseudoalteromonas atlantica T6c, complete genome

Start: 1405719, End: 1407476, Length: 1758

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017059:2771085:2792862279286227947781917Rhodospirillum photometricum DSM 122, complete genomeGlutathione-regulated potassium-efflux system protein KefB11e-100367
NC_007508:4765751:4768789476878947706061818Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeglutathione-regulated potassium-efflux protein C5e-98358
NC_007492:3954345:3991840399184039936481809Pseudomonas fluorescens PfO-1, complete genomePotassium efflux system protein2e-93343
NC_009668:1591290:1591290159129015930831794Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencepotassium efflux system protein1e-92340
NC_004578:4781326:4798755479875548005781824Pseudomonas syringae pv. tomato str. DC3000, complete genomeglutathione-regulated potassium-efflux system protein1e-90334
NC_003910:3448983:3464423346442334662551833Colwellia psychrerythraea 34H, complete genomeglutathione-regulated potassium-efflux system protein KefC2e-90333
NC_010510:139685:1437921437921455581767Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completepotassium efflux system protein5e-88325
NC_011071:1877500:1877587187758718794191833Stenotrophomonas maltophilia R551-3, complete genomepotassium efflux system protein4e-86319
NC_011757:97281:1240771240771258431767Methylobacterium chloromethanicum CM4, complete genomepotassium efflux system protein9e-86318
NC_010943:2091199:2091199209119920930311833Stenotrophomonas maltophilia K279a, complete genomeputative sodium/hydrogen exchanger TrkA-N domain transmembrane transport protein1e-85317
NC_012808:58701:8314083140849061767Methylobacterium extorquens AM1, complete genomepotassium:proton antiporter (CPA2 family)1e-85317
NC_009049:1125681:1125681112568111276091929Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencesodium/hydrogen exchanger3e-79296
NC_012918:3203136:3211097321109732130101914Geobacter sp. M21 chromosome, complete genomepotassium efflux system protein1e-75284
NC_014166:1809052:1827861182786118295731713Arcobacter nitrofigilis DSM 7299 chromosome, complete genomesodium/hydrogen exchanger9e-68258
NC_015731:2460248:2492230249223024942121983Nitrosomonas sp. Is79A3 chromosome, complete genomepotassium efflux system protein2e-63244
NC_013855:892657:9043019043019059981698Azospirillum sp. B510 plasmid pAB510a, complete sequencemonovalent cation:H+ antiporter-2, CPA2 family5e-62239
NC_008825:4025705:4028098402809840301402043Methylibium petroleiphilum PM1, complete genomesodium/hydrogen exchanger family protein3e-61236
NC_017050:995500:1020301102030110220281728Rickettsia prowazekii str. Katsinyian chromosome, complete genomeglutathione-regulated potassium-efflux system protein KEFB (kefB)9e-59228
NC_017049:993863:1018651101865110203781728Rickettsia prowazekii str. Chernikova chromosome, complete genomeglutathione-regulated potassium-efflux system protein KEFB (kefB)9e-59228
NC_017048:225980:2508052508052525321728Rickettsia prowazekii str. GvV257 chromosome, complete genomeglutathione-regulated potassium-efflux system protein KEFB (kefB)9e-59228
NC_000963:995500:1020382102038210221091728Rickettsia prowazekii str. Madrid E, complete genomeGLUTATHIONE-REGULATED POTASSIUM-EFFLUX SYSTEM PROTEIN KEFB (kefB)9e-59228
NC_017051:993000:1017894101789410196211728Rickettsia prowazekii str. Dachau chromosome, complete genomeglutathione-regulated potassium-efflux system protein KEFB (kefB)9e-59228
NC_017056:995500:1020292102029210220191728Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomeglutathione-regulated potassium-efflux system protein KEFB (kefB)9e-59228
NC_017057:996000:1020959102095910226861728Rickettsia prowazekii str. RpGvF24 chromosome, complete genomeglutathione-regulated potassium-efflux system protein KEFB (kefB)9e-59228
NC_006142:994753:1019745101974510214721728Rickettsia typhi str. Wilmington, complete genomeglutathione-regulated potassium-efflux system8e-59228
NC_017062:996197:1021189102118910229161728Rickettsia typhi str. B9991CWPP chromosome, complete genomeglutathione-regulated potassium-efflux system8e-59228
NC_017066:995629:1020621102062110223481728Rickettsia typhi str. TH1527 chromosome, complete genomeglutathione-regulated potassium-efflux system8e-59228
NC_009881:1099479:1126654112665411283811728Rickettsia akari str. Hartford, complete genomeglutathione-regulated potassium-efflux system protein kefB3e-58226
NC_007908:4677856:4704535470453547065051971Rhodoferax ferrireducens T118, complete genomesodium/hydrogen exchanger2e-56220
NC_017058:283738:2837382837382854651728Rickettsia australis str. Cutlack chromosome, complete genomeglutathione-regulated potassium-efflux system protein kefB3e-56219
NC_009720:5046861:5046861504686150485971737Xanthobacter autotrophicus Py2, complete genomesodium/hydrogen exchanger5e-55216
NC_012559:1888000:1909233190923319112271995Laribacter hongkongensis HLHK9, complete genomeKefB7e-52205
NC_018876:2403892:2430658243065824326822025Methanolobus psychrophilus R15 chromosome, complete genomesodium/hydrogen exchanger3e-51203
NC_007955:1523500:1536106153610615380161911Methanococcoides burtonii DSM 6242, complete genomesodium/hydrogen exchanger2e-47191
NC_014935:31020:3325533255348771623Nitratifractor saLSUginis DSM 16511 chromosome, complete genomesodium/hydrogen exchanger9e-45182
NC_008942:1198000:1213839121383912158872049Methanocorpusculum labreanum Z, complete genomehypothetical protein1e-44181
NC_009485:8138314:8178555817855581800841530Bradyrhizobium sp. BTAi1 chromosome, complete genomeglutathione-regulated potassium-efflux system protein kefC8e-44178
NC_015682:205900:2393212393212413422022Thermodesulfobacterium sp. OPB45 chromosome, complete genomesodium/hydrogen exchanger3e-41170
NC_002928:3715492:3718416371841637196961281Bordetella parapertussis 12822, complete genomeputative membrane efflux protein4e-40166
NC_009659:1050532:1076591107659110783181728Janthinobacterium sp. Marseille chromosome, complete genomeglutathione-regulated potassium-efflux system protein kefB6e-40166
NC_002929:2589202:2595819259581925970451227Bordetella pertussis Tohama I, complete genomeputative membrane efflux protein6e-39162
NC_002927:4130697:4133621413362141348471227Bordetella bronchiseptica RB50, complete genomeputative membrane efflux protein6e-39162
NC_017223:2618535:2620455262045526216811227Bordetella pertussis CS chromosome, complete genomeputative membrane efflux protein6e-39162
NC_003552:3862275:3862878386287838648631986Methanosarcina acetivorans C2A, complete genomeglutathione-regulated potassium-efflux system protein1e-37158
NC_004088:1196875:1223560122356012252511692Yersinia pestis KIM, complete genomepotassium efflux protein2e-33144
NC_010634:1175404:1202620120262012043111692Yersinia pseudotuberculosis PB1/+, complete genomepotassium efflux system protein2e-33144
NC_008150:2878450:2882179288217928838701692Yersinia pestis Antiqua, complete genomeputative potassium antiporter2e-33144
NC_005810:872672:9013939013939030841692Yersinia pestis biovar Microtus str. 91001, complete genomeputative cation:proton antiport protein2e-33144
NC_008149:1122693:1152734115273411544251692Yersinia pestis Nepal516, complete genomepotassium antiporter2e-33144
NC_006155:1191307:1220077122007712217681692Yersinia pseudotuberculosis IP 32953, complete genomeCPA2 family K+/H+ antiporter, CAMP induced rosB subunit2e-33144
NC_003143:3446740:3450514345051434522051692Yersinia pestis CO92, complete genomeputative potassium antiporter2e-33144
NC_010465:3465351:3469447346944734711381692Yersinia pseudotuberculosis YPIII, complete genomepotassium efflux system protein2e-33144
NC_009381:3094939:3098667309866731003581692Yersinia pestis Pestoides F chromosome, complete genomeputative cation:proton antiport protein2e-33144
NC_014029:3501500:3504918350491835066091692Yersinia pestis Z176003 chromosome, complete genomeputative potassium antiporter2e-33144
NC_017154:3444497:3447883344788334495741692Yersinia pestis D106004 chromosome, complete genomeputative potassium antiporter2e-33144
NC_017168:2281040:2309861230986123115521692Yersinia pestis A1122 chromosome, complete genomeputative cation:proton antiport protein2e-33144
NC_009708:3411153:3414538341453834162291692Yersinia pseudotuberculosis IP 31758 chromosome, complete genomecation:proton antiport protein2e-33144
NC_017265:3240379:3244107324410732457981692Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative transporter with NAD(P)-binding Rossmann-fold domain2e-33144
NC_015224:1391088:1411435141143514131261692Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative cation:proton antiport protein8e-33142
NC_008800:3330944:3335753333575333374441692Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative cation:proton antiport protein8e-33142
NC_010159:1288000:1314919131491913166071689Yersinia pestis Angola, complete genometransporter, monovalent cation:proton antiporter-2 (CPA2) family3e-32140
NC_017160:3426486:3429872342987234315601689Yersinia pestis D182038 chromosome, complete genomepotassium antiporter3e-32140
NC_008554:4781500:4796449479644947984071959Syntrophobacter fumaroxidans MPOB, complete genomesodium/hydrogen exchanger5e-32139
NC_009667:1934818:1955369195536919572161848Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequencepotassium efflux system protein1e-30134
NC_008048:389645:3997853997854014821698Sphingopyxis alaskensis RB2256, complete genomesodium/hydrogen exchanger5e-28126
NC_014355:844248:8442488442488459841737Candidatus Nitrospira defluvii, complete genomemonovalent cation:proton antiporter4e-28126
NC_011146:603429:6122496122496140031755Geobacter bemidjiensis Bem, complete genomesodium/hydrogen exchanger6e-28125
NC_010511:5424004:5427327542732754291501824Methylobacterium sp. 4-46 chromosome, complete genomepotassium efflux system protein3e-25117
NC_011894:5056901:5057500505750050593231824Methylobacterium nodulans ORS 2060, complete genomepotassium efflux system protein2e-23111
NC_015389:2030154:2030154203015420322262073Coriobacterium glomerans PW2 chromosome, complete genomesodium/hydrogen exchanger1e-22108
NC_008781:654289:6703426703426720601719Polaromonas naphthalenivorans CJ2, complete genomesodium/hydrogen exchanger1e-22108
NC_015259:673662:6994446994447006221179Polymorphum gilvum SL003B-26A1 chromosome, complete genomeSodium/hydrogen exchanger4e-22106
NC_008609:3921113:3924156392415639258111656Pelobacter propionicus DSM 2379, complete genomesodium/hydrogen exchanger3e-20100
NC_015559:3511231:3527705352770535293031599Marinomonas posidonica IVIA-Po-181 chromosome, complete genomesodium/hydrogen exchanger4e-20100
NC_007963:1190847:1241345124134512430331689Chromohalobacter salexigens DSM 3043, complete genomesodium/hydrogen exchanger1e-1998.6
NC_018679:2412000:2413694241369424152651572Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeputative glutathione-regulated potassium-efflux system protein9e-1995.5
NC_008576:3331825:3337368333736833389751608Magnetococcus sp. MC-1, complete genomesodium/hydrogen exchanger2e-1894.4
NC_007645:6955479:6964607696460769663221716Hahella chejuensis KCTC 2396, complete genomeKef-type K+ transport system, predicted NAD-binding component5e-1893.2
NC_014323:3976351:3977123397712339788861764Herbaspirillum seropedicae SmR1 chromosome, complete genomeKef-type K+ transport system, membrane component protein5e-1893.2
NC_006347:4031000:4032976403297640352402265Bacteroides fragilis YCH46, complete genomeputative Na+/H+ antiporter4e-1583.6
NC_016776:3973428:3975388397538839776522265Bacteroides fragilis 638R, complete genomeputative K+ transport related membrane protein4e-1583.6
NC_003228:3934770:3936730393673039389942265Bacteroides fragilis NCTC 9343, complete genomeputative K+ transport related membrane protein4e-1583.6
NC_008255:908881:9230869230869253112226Cytophaga hutchinsonii ATCC 33406, complete genomeNa+/H+ antiporter4e-1583.6
NC_006351:1631760:1651782165178216535331752Burkholderia pseudomallei K96243 chromosome 2, complete sequenceefflux pump/antiporter7e-1582.8
NC_014541:475350:5267015267015282811581Ferrimonas balearica DSM 9799 chromosome, complete genometransporter, CPA2 family8e-1375.9
NC_015424:1689500:1723066172306617246401575Aeromonas veronii B565 chromosome, complete genomeglutathione-regulated potassium-efflux system protein KefC2e-1274.3
NC_011565:423000:4370124370124392762265Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,putative kef-type K+(efflux) /H+ antiporter3e-1170.5
NC_016604:5067562:5100345510034551020031659Mycobacterium rhodesiae NBB3 chromosome, complete genomeKef-type K+ transport system NAD-binding protein6e-1169.7
NC_010814:3048441:308780030878003088384585Geobacter lovleyi SZ, complete genome3e-1067.4
NC_012984:3077004:3078509307850930797051197Lactobacillus plantarum JDM1, complete genomeNa(+)/H(+) antiporter5e-1066.6
NC_019792:2416000:2427036242703624287841749Natronobacterium gregoryi SP2 chromosome, complete genomeKef-type K+ transport system membrane protein8e-1065.9
NC_014008:114000:1230361230361246491614Coraliomargarita akajimensis DSM 45221 chromosome, complete genomesodium/hydrogen exchanger2e-0964.7
NC_009615:2039964:2042081204208120443692289Parabacteroides distasonis ATCC 8503 chromosome, complete genomecation/H+ antiporter7e-0962.8
NC_015387:1344467:1347112134711213486621551Marinithermus hydrothermalis DSM 14884 chromosome, complete genomesodium/hydrogen exchanger7e-0962.8
NC_011296:801612:8023268023268033481023Thermodesulfovibrio yellowstonii DSM 11347, complete genomepotassium uptake protein, TrkA family2e-0861.6
NC_014554:337268:3562713562713574551185Lactobacillus plantarum subsp. plantarum ST-III chromosome,periplasmic nitrate reductase NapA3e-0860.5
NC_004567:343500:3638193638193650031185Lactobacillus plantarum WCFS1, complete genomeNa(+)/H(+) antiporter3e-0860.5
NC_008497:447427:4647184647184658991182Lactobacillus brevis ATCC 367, complete genomeKef-type K+ transport system, membrane component1e-0758.9
NC_008525:270310:2897552897552909151161Pediococcus pentosaceus ATCC 25745, complete genomeKef-type K+ transport system, membrane component3e-0757.4
NC_016616:2997348:2997348299734829983851038Dechlorosoma suillum PS chromosome, complete genomeK+ transport system, NAD-binding component4e-0757
NC_013202:906044:9279149279149295481635Halomicrobium mukohataei DSM 12286, complete genomeTrkA-N domain protein5e-0756.6
NC_013202:771161:7711617711617723721212Halomicrobium mukohataei DSM 12286, complete genomesodium/hydrogen exchanger9e-0755.8
NC_003909:927955:9340869340869352131128Bacillus cereus ATCC 10987, complete genomegermination protein gerN2e-0654.7
NC_010003:605961:6098536098536108931041Petrotoga mobilis SJ95, complete genomeTrkA-N domain protein8e-0652.8
NC_014314:1485500:150027815002781500661384Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, complete1e-0552.4