Pre_GI: BLASTP Hits

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Query: NC_008228:1404126:1404126 Pseudoalteromonas atlantica T6c, complete genome

Start: 1404126, End: 1404761, Length: 636

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011144:2770842:279099827909982791582585Phenylobacterium zucineum HLK1, complete genomepeptidyl-prolyl cis-trans isomerase, cyclophilin type6e-30130
NC_010084:1299387:131744113174411318016576Burkholderia multivorans ATCC 17616 chromosome 1, completecyclophilin type peptidyl-prolyl cis-trans isomerase2e-22105
NC_010804:2206000:220675722067572207332576Burkholderia multivorans ATCC 17616 chromosome 1, completepeptidylprolyl isomerase2e-22105
NC_015138:3160764:318352431835243184117594Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completepeptidylprolyl isomerase1e-1789.7
NC_014153:436082:449057449057449701645Thiomonas intermedia K12 chromosome, complete genomePeptidylprolyl isomerase9e-1787
NC_012691:2097287:209883920988392099336498Tolumonas auensis DSM 9187, complete genomepeptidyl-prolyl cis-trans isomerase cyclophilin type2e-1685.5
NC_013173:2305394:232704523270452327545501Desulfomicrobium baculatum DSM 4028, complete genomepeptidyl-prolyl cis-trans isomerase cyclophilin type2e-1685.5
NC_012440:1405879:140709614070961407662567Persephonella marina EX-H1, complete genomepeptidyl-prolyl cis-trans isomerase B4e-1684.7
NC_010410:3886500:389962838996283900185558Acinetobacter baumannii AYE, complete genomepeptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase)7e-1684
NC_010611:31976:391923919239749558Acinetobacter baumannii ACICU, complete genomePeptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family8e-1683.6
NC_012917:4328463:434588943458894346461573Pectobacterium carotovorum subsp. carotovorum PC1, complete genomepeptidyl-prolyl cis-trans isomerase cyclophilin type1e-1583.2
NC_012796:2090000:210364721036472104144498Desulfovibrio magneticus RS-1, complete genomepeptidyl-prolyl cis-trans isomerase B1e-1583.2
NC_008570:3083850:309639730963973096894498Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomepeptidyl-prolyl cis-trans isomerase B2e-1582
NC_009512:1518113:152000815200081520565558Pseudomonas putida F1, complete genomepeptidyl-prolyl cis-trans isomerase, cyclophilin type2e-1582.4
NC_014924:2517068:253963425396342540128495Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomepeptidyl-prolyl cis-trans isomerase cyclophilin type5e-1581.3
NC_015424:2726223:273913427391342739631498Aeromonas veronii B565 chromosome, complete genomepeptidyl-prolyl cis-trans isomerase B6e-1580.9
NC_010465:3431500:344859534485953449089495Yersinia pseudotuberculosis YPIII, complete genomepeptidyl-prolyl cis-trans isomerase cyclophilin type7e-1580.5
NC_009348:1663870:167761516776151678112498Aeromonas salmonicida subsp. salmonicida A449, complete genomepeptidyl-prolyl cis-trans isomerase B8e-1580.5
NC_007712:1182518:118550811855081186002495Sodalis glossinidius str. 'morsitans', complete genomepeptidyl-prolyl cis-trans isomerase B2e-1479
NC_004459:1794540:181280618128061813351546Vibrio vulnificus CMCP6 chromosome I, complete sequencePeptidyl-prolyl cis-trans isomerase2e-1479.3
NC_009832:1280938:128236112823611282855495Serratia proteamaculans 568, complete genomepeptidyl-prolyl cis-trans isomerase cyclophilin type4e-1477.8
NC_014153:436082:448543448543449034492Thiomonas intermedia K12 chromosome, complete genomePeptidylprolyl isomerase1e-1376.6
NC_014844:2056943:205811120581112058617507Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomepeptidylprolyl isomerase2e-1375.5
NC_014002:1772060:179113917911391791564426Methanohalophilus mahii DSM 5219 chromosome, complete genomepeptidyl-prolyl cis-trans isomerase cyclophilin type3e-1375.1
NC_010804:2206000:220742122074212207912492Burkholderia multivorans ATCC 17616 chromosome 1, completecyclophilin B4e-1374.7
NC_010084:1299387:131686113168611317352492Burkholderia multivorans ATCC 17616 chromosome 1, completecyclophilin type peptidyl-prolyl cis-trans isomerase4e-1374.7
NC_017243:2383577:240000324000032400578576Brachyspira intermedia PWS/A chromosome, complete genomepeptidyl-prolyl cis-trans isomerase B5e-1374.3
NC_007651:2166000:218429321842932184784492Burkholderia thailandensis E264 chromosome I, complete sequencepeptidyl-prolyl cis-trans isomerase B5e-1374.3
NC_005877:665092:668957668957669412456Picrophilus torridus DSM 9790, complete genomepeptidyl-prolyl cis-trans isomerase8e-1373.6
NC_009455:1025915:104862910486291049255627Dehalococcoides sp. BAV1 chromosome, complete genomepeptidylprolyl isomerase1e-1273.6
NC_012225:1213421:123091212309121231487576Brachyspira hyodysenteriae WA1, complete genomepeptidyl-prolyl cis-trans isomerase B2e-1272.8
NC_002488:1157684:116136811613681161862495Xylella fastidiosa 9a5c, complete genomepeptidyl-prolyl cis-trans isomerase2e-1272.8
NC_014306:1286248:128763012876301288124495Erwinia billingiae Eb661, complete genomePeptidyl-prolyl cis-trans isomerase B (Rotamase B)3e-1272
NC_007645:2181739:220335022033502203844495Hahella chejuensis KCTC 2396, complete genomePeptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family3e-1272
NC_020541:2769419:277318427731842773900717Rhodanobacter sp. 2APBS1, complete genomepeptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family3e-1272
NC_021150:2348214:235324523532452353739495Azotobacter vinelandii CA6, complete genomepeptidylprolyl isomerase4e-1271.6
NC_012560:2348202:235323323532332353727495Azotobacter vinelandii DJ, complete genomepeptidylprolyl isomerase4e-1271.6
NC_014150:2501299:251578925157892516364576Brachyspira murdochii DSM 12563 chromosome, complete genomepeptidyl-prolyl cis-trans isomerase cyclophilin type5e-1270.9
NC_016816:3373950:338960733896073390101495Pantoea ananatis LMG 5342, complete genomepeptidyl-prolyl cis-trans isomerase B6e-1270.9
NC_012214:2805297:282630628263062826800495Erwinia pyrifoliae Ep1/96, complete genomePeptidyl-prolyl cis-trans isomerase B (Rotamase B)8e-1270.5
NC_014562:469154:469870469870470364495Pantoea vagans C9-1 chromosome, complete genomepeptidyl-prolyl cis-trans isomerase B9e-1270.1
NC_020260:2725201:274803327480332748527495Cronobacter sakazakii Sp291, complete genomepeptidyl-prolyl cis-trans isomerase B (rotamase B)1e-1169.7
NC_015761:520858:521583521583522077495Salmonella bongori NCTC 12419, complete genomepeptidyl-prolyl cis-trans isomerase B2e-1168.9
NC_009617:648000:662757662757663437681Clostridium beijerinckii NCIMB 8052 chromosome, complete genomepeptidyl-prolyl isomerase2e-1169.3
NC_015663:2807574:281118028111802811674495Enterobacter aerogenes KCTC 2190 chromosome, complete genomepeptidyl-prolyl cis-trans isomerase B3e-1168.9
NC_016012:396910:414174414174414716543Candidatus Arthromitus sp. SFB-rat-Yit, complete genomecyclophilin-type peptidyl-prolyl cis-trans isomerase4e-1167.8
NC_013520:1559000:157618415761841576618435Veillonella parvula DSM 2008, complete genomepeptidyl-prolyl cis-trans isomerase cyclophilin type6e-1167.4
NC_010161:1501758:152718115271811527693513Bartonella tribocorum CIP 105476, complete genomepeptidyl prolyl cis-trans isomerase7e-1167.4
NC_015975:1493636:150991215099121510496585Lactobacillus ruminis ATCC 27782 chromosome, complete genomepeptidyl-prolyl cis-trans isomerase1e-1066.6
NC_008262:1721496:172582317258231726410588Clostridium perfringens SM101, complete genomepeptidyl-prolyl cis-trans isomerase, cyclophilin-type2e-1065.9
NC_010610:1765000:178608817860881786675588Lactobacillus fermentum IFO 3956, complete genomepeptidyl-prolyl cis-trans isomerase5e-1064.3
NC_016593:2370000:237500823750082375454447Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completepeptidyl-prolyl cis-trans isomerase5e-1064.3
NC_010674:658596:671594671594672280687Clostridium botulinum B str. Eklund 17B, complete genomepeptidyl-prolyl cis-trans isomerase, cyclophilin-type6e-1063.9
NC_012781:2802000:281873628187362819257522Eubacterium rectale ATCC 33656, complete genomepeptidylprolyl isomerase9e-1063.5
NC_004557:691944:695073695073695591519Clostridium tetani E88, complete genomepeptidyl-prolyl cis-trans isomerase1e-0962.8
NC_010723:622928:636788636788637474687Clostridium botulinum E3 str. Alaska E43, complete genomepeptidyl-prolyl cis-trans isomerase, cyclophilin-type1e-0963.2
NC_014614:656000:675505675505676026522Clostridium sticklandii, complete genomepeptidyl-prolyl cis-trans isomerase B (rotamase B)1e-0963.2
NC_014393:4646000:465984846598484660366519Clostridium cellulovorans 743B chromosome, complete genomePeptidylprolyl isomerase1e-0963.5
NC_008054:930890:942754942754943341588Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completepeptidyl-prolyl cis-trans isomerase (rotamase),cyclophilin type2e-0962.8
NC_017187:387735:406676406676407209534Arcobacter butzleri ED-1, complete genomepeptidyl-prolyl cis-trans isomerase-like protein2e-0962.4
NC_021184:3793285:380918738091873809618432Desulfotomaculum gibsoniae DSM 7213, complete genomepeptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family3e-0961.6
NC_014334:769205:773842773842774426585Lactobacillus casei str. Zhang chromosome, complete genomepeptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family3e-0962
NC_008526:817628:822265822265822849585Lactobacillus casei ATCC 334, complete genomePeptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family3e-0962
NC_009850:413093:429034429034429567534Arcobacter butzleri RM4018, complete genomepeptidyl-prolyl cis-trans isomerase-like protein3e-0962
NC_015713:2453409:247596224759622476492531Simkania negevensis Z chromosome gsn.131, complete genomeputative peptidylprolyl isomerase II (Cyclophilin A)3e-0962
NC_013198:813830:821407821407821991585Lactobacillus rhamnosus GG, complete genomepeptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family3e-0962
NC_014150:2501299:251638925163892516877489Brachyspira murdochii DSM 12563 chromosome, complete genomepeptidyl-prolyl cis-trans isomerase cyclophilin type4e-0961.2
NC_007576:435713:443626443626444266641Lactobacillus sakei subsp. sakei 23K, complete genomePutative peptidylprolyl isomerase (Peptidylprolyl cis-trans isomerase) (PPIase)4e-0961.2
NC_019978:2293327:230198223019822302419438Halobacteroides halobius DSM 5150, complete genomepeptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family5e-0960.8
NC_012225:1213421:123038712303871230878492Brachyspira hyodysenteriae WA1, complete genomepeptidyl-prolyl cis-trans isomerase A5e-0961.2
NC_010999:880878:884862884862885446585Lactobacillus casei, complete genomePeptidyl-prolyl cis-trans isomerase5e-0961.2
NC_017243:2383577:239948023994802399971492Brachyspira intermedia PWS/A chromosome, complete genomepeptidyl-prolyl cis-trans isomerase A6e-0960.8
NC_013199:811929:815957815957816541585Lactobacillus rhamnosus Lc 705, complete genomepeptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family7e-0960.8
NC_008529:906576:929427929427930002576Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completePeptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family2e-0858.9
NC_008529:887008:929427929427930002576Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completePeptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family2e-0858.9
NC_008529:918277:929427929427930002576Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completePeptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family2e-0858.9
NC_009012:75000:992959929599906612Clostridium thermocellum ATCC 27405, complete genomePeptidylprolyl isomerase2e-0859.7
NC_004668:2762464:277663327766332777223591Enterococcus faecalis V583, complete genomepeptidyl-prolyl cis-trans isomerase, cyclophilin-type3e-0858.5
NC_009484:1299500:131275213127521313306555Acidiphilium cryptum JF-5 chromosome, complete genomecyclophilin type peptidyl-prolyl cis-trans isomerase2e-0755.5
NC_009481:1109324:114176611417661142194429Synechococcus sp. WH 7803 chromosome, complete genomepeptidyl-prolyl cis-trans isomerase2e-0755.5
NC_014166:2649444:265505726550572655572516Arcobacter nitrofigilis DSM 7299 chromosome, complete genomecyclophilin type peptidyl-prolyl cis-trans isomerase2e-0755.8
NC_014960:3410741:3431239343123934324411203Anaerolinea thermophila UNI-1, complete genomepeptidyl-prolyl cis-trans isomerase B2e-0755.8
NC_008578:2431074:128631286313405543Acidothermus cellulolyticus 11B, complete genomePeptidylprolyl isomerase2e-0756.2
NC_014836:1108919:111336411133641113924561Desulfurispirillum indicum S5 chromosome, complete genomepeptidylprolyl isomerase3e-0755.5
NC_014639:1894500:190343419034341903874441Bacillus atrophaeus 1942 chromosome, complete genomePpiB protein5e-0754.7
CP002207:1894500:190343419034341903874441Bacillus atrophaeus 1942, complete genomePpiB5e-0754.7
NC_015376:345347:349362349362349913552Burkholderia gladioli BSR3 chromosome chromosome 2, completepeptidyl-prolyl cis-trans isomerase cyclophilin type6e-0754.3
NC_014666:8198554:8215832821583282171181287Frankia sp. EuI1c chromosome, complete genomepeptidyl-prolyl cis-trans isomerase cyclophilin type9e-0753.5
NC_020156:49666:548825488255814933Nonlabens dokdonensis DSW-6, complete genomepeptidyl-prolyl cis-trans isomerase9e-0753.5
NC_008533:1380406:1380406138040613818061401Streptococcus pneumoniae D39, complete genomeCof family protein/peptidyl-prolyl cis-trans isomerase, cyclophilin type1e-0653.1
NC_003098:1372875:1372875137287513742751401Streptococcus pneumoniae R6, complete genomehypothetical protein1e-0653.1
NC_012469:1403412:1403412140341214048121401Streptococcus pneumoniae Taiwan19F-14, complete genomeCof family protein/peptidyl-prolyl cis-trans isomerase, cyclophilin type1e-0653.1
NC_012466:1367099:1367099136709913684991401Streptococcus pneumoniae JJA, complete genomeCof family protein/peptidyl-prolyl cis-trans isomerase, cyclophilin type1e-0653.5
NC_011900:1451545:1455235145523514566351401Streptococcus pneumoniae ATCC 700669, complete genomecyclophilin type peptidyl-prolyl cis-trans isomerase protein1e-0653.5
NC_012468:1453763:1453763145376314551631401Streptococcus pneumoniae 70585, complete genomeCof family protein/peptidyl-prolyl cis-trans isomerase, cyclophilin type1e-0653.5
NC_014738:55782:6292562925640071083Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,peptidyl-prolyl isomerase2e-0652.4
NC_013510:39975:593605936059890531Thermomonospora curvata DSM 43183, complete genomePeptidylprolyl isomerase6e-0650.8