Pre_GI: BLASTP Hits

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Query: NC_008150:650899:655055 Yersinia pestis Antiqua, complete genome

Start: 655055, End: 655255, Length: 201

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from the Republic of Congo. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:1136000:113964911396491139849201Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,DNA-binding protein2e-30130
NC_017168:4155143:416033541603354160535201Yersinia pestis A1122 chromosome, complete genomeAlpA family transcriptional regulator2e-30130
NC_009381:2939782:295394029539402954140201Yersinia pestis Pestoides F chromosome, complete genometranscriptional regulator2e-30130
NC_008149:3251196:326535532653553265555201Yersinia pestis Nepal516, complete genometranscriptional regulator2e-30130
NC_010159:1417993:142247114224711422671201Yersinia pestis Angola, complete genometranscriptional regulator, AlpA family2e-30130
NC_005810:1130251:114441011444101144610201Yersinia pestis biovar Microtus str. 91001, complete genometranscriptional regulator2e-30130
NC_014500:443874:459413459413459616204Dickeya dadantii 3937 chromosome, complete genomeDNA-binding protein4e-1786.7
NC_013592:4295449:430099243009924301195204Dickeya dadantii Ech586, complete genomephage transcriptional regulator, AlpA4e-1786.7
NC_012912:4194821:419819641981964198399204Dickeya zeae Ech1591, complete genomephage transcriptional regulator, AlpA4e-1786.7
NC_012880:4117376:412043941204394120642204Dickeya dadantii Ech703, complete genomephage transcriptional regulator, AlpA9e-1785.5
NC_013008:3525428:355770135577013557907207Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeDNA binding protein8e-1268.9
NC_002695:3468873:349874034987403498946207Escherichia coli O157:H7 str. Sakai, complete genomeputative DNA binding protein8e-1268.9
NC_002655:3538656:356603035660303566236207Escherichia coli O157:H7 EDL933, complete genomeputative DNA binding protein8e-1268.9
NC_008322:2077628:209572820957282095949222Shewanella sp. MR-7, complete genomephage transcriptional regulator, AlpA1e-1168.9
NC_010694:2716348:273867627386762738873198Erwinia tasmaniensis, complete genomePutative hypothetical protein (prophage CP4-57 regulatory protein)1e-1168.6
NC_013941:3300000:333647233364723336720249Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDNA binding protein1e-1168.2
NC_003295:998000:101150510115051011771267Ralstonia solanacearum GMI1000, complete genomePUTATIVE BACTERIOPHAGE DNA-BINDING TRANSCRIPTION REGULATOR PROTEIN3e-1167
NC_011745:3245000:326245132624513262654204Escherichia coli ED1a chromosome, complete genomeputative regulatory protein from prophage (AlpA family)4e-1167
NC_011283:1811000:185314418531441853353210Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator AlpA family8e-1165.9
NC_005139:796546:813042813042813236195Vibrio vulnificus YJ016 chromosome I, complete sequencepredicted transcriptional regulator7e-1165.9
NC_010322:5293652:531510753151075315289183Pseudomonas putida GB-1 chromosome, complete genomephage transcriptional regulator AlpA7e-1165.9
NC_009778:567000:596545596545596727183Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-1065.1
NC_016818:1795576:183513518351351835329195Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative transcriptional regulator1e-1065.1
NC_013892:3278647:328257832825783282784207Xenorhabdus bovienii SS-2004 chromosome, complete genomeCP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage1e-1065.1
NC_011094:2791719:281336128133612813570210Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-1064.3
NC_010067:191190:199577199577199783207Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-1064.3
NC_017047:2079368:208454920845492084743195Rahnella aquatilis HX2 chromosome, complete genomeputative prophage regulatory protein2e-1064.3
NC_010634:1916000:191718019171801917365186Yersinia pseudotuberculosis PB1/+, complete genomephage transcriptional regulator, AlpA3e-1063.9
NC_009381:1362471:139729913972991397484186Yersinia pestis Pestoides F chromosome, complete genometranscriptional regulator3e-1063.9
NC_012731:3411161:342822134282213428406186Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative transcriptional regulator3e-1063.9
NC_012912:1701231:171525317152531715447195Dickeya zeae Ech1591, complete genomephage transcriptional regulator, AlpA3e-1063.9
CU928160:4570498:458052645805264580732207Escherichia coli IAI1 chromosome, complete genomeputative phage DNA binding protein3e-1063.9
NC_011741:4570498:458052645805264580732207Escherichia coli IAI1 chromosome, complete genomeputative phage DNA binding protein3e-1063.9
NC_011745:2209288:226533522653352265553219Escherichia coli ED1a chromosome, complete genomeputative DNA binding protein from phage origin4e-1063.5
NC_014500:3097362:314293231429323143126195Dickeya dadantii 3937 chromosome, complete genomeDNA-binding protein4e-1063.5
NC_012668:1688500:169464616946461694876231Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein5e-1063.2
NC_017270:1755552:178876517887651788965201Vibrio cholerae LMA3984-4 chromosome chromosome I, completetranscriptional regulator, AlpA like protein4e-1063.2
NC_012917:1840172:185006018500601850278219Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage transcriptional regulator, AlpA6e-1062.8
NC_013892:1272448:129876412987641298970207Xenorhabdus bovienii SS-2004 chromosome, complete genomeCP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage6e-1062.8
NC_017270:1755552:177452717745271774703177Vibrio cholerae LMA3984-4 chromosome chromosome I, completetranscriptional regulator7e-1062.8
NC_016445:1363831:140720214072021407378177Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetranscriptional regulator7e-1062.8
NC_009457:1444449:148890414889041489110207Vibrio cholerae O395 chromosome 2, complete sequencetranscriptional regulator8e-1062.4
NC_002505:1931750:193580119358011936007207Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional regulator8e-1062.4
NC_009436:3117661:314615831461583146364207Enterobacter sp. 638, complete genomephage transcriptional regulator, AlpA8e-1062.4
NC_016857:2871689:289653928965392896805267Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage DNA binding protein9e-1062.4
NC_011283:4438500:445473644547364454942207Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator AlpA family9e-1062.4
NC_012578:1838470:188293418829341883140207Vibrio cholerae M66-2 chromosome I, complete sequencetranscriptional regulator8e-1062.4
NC_012582:2013515:202032320203232020529207Vibrio cholerae O395 chromosome chromosome I, complete sequencetranscriptional regulator8e-1062.4
NC_005810:1794490:179545917954591795740282Yersinia pestis biovar Microtus str. 91001, complete genomeputative transcriptional regulator8e-1062.4
NC_008150:1420825:142179414217941422075282Yersinia pestis Antiqua, complete genomehypothetical protein8e-1062.4
NC_003143:2137945:213871521387152138996282Yersinia pestis CO92, complete genomeputative transcriptional regulator8e-1062.4
NC_016944:1978058:198210919821091982315207Vibrio cholerae IEC224 chromosome I, complete sequencetranscriptional regulator8e-1062.4
NC_012668:1688500:171150017115001711706207Vibrio cholerae MJ-1236 chromosome 1, complete sequencetranscriptional regulator8e-1062.4
NC_011080:2870428:288471228847122884978267Salmonella enterica subsp. enterica serovar Newport str. SL254,phage DNA binding protein1e-0962
NC_004547:1873390:188101818810181881212195Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative prophage regulatory protein1e-0962
NC_013508:3593000:360746636074663607687222Edwardsiella tarda EIB202, complete genomehypothetical protein1e-0962
NC_010102:2862178:286427828642782864544267Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0962
NC_005085:659378:678312678312678530219Chromobacterium violaceum ATCC 12472, complete genomeprobable prophage regulatory protein1e-0962
NC_014121:677799:691347691347691613267Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completephage transcriptional regulator, AlpA1e-0962
NC_005139:2201820:227257322725732272794222Vibrio vulnificus YJ016 chromosome I, complete sequencepredicted transcriptional regulator1e-0962
NC_013421:1819036:184891018489101849116207Pectobacterium wasabiae WPP163, complete genomephage transcriptional regulator, AlpA1e-0962
NC_016845:575123:589780589780590046267Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,phage DNA binding protein2e-0961.6
NC_011080:4703266:471759947175994717859261Salmonella enterica subsp. enterica serovar Newport str. SL254,phage transcriptional regulator, AlpA1e-0961.6
NC_015379:908904:935089935089935310222Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative transcription factor, AlpA family2e-0961.2
NC_002695:301939:318189318189318449261Escherichia coli O157:H7 str. Sakai, complete genomeputative DNA binding protein2e-0961.2
NC_002655:301940:318190318190318450261Escherichia coli O157:H7 EDL933, complete genomeputative regulatory protein encoded in prophage CP-933I2e-0961.2
NC_011353:305820:322069322069322329261Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage DNA binding protein2e-0961.2
NC_013008:306953:323381323381323641261Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeregulatory protein encoded in prophage CP-933I2e-0961.2
NC_013941:338121:359163359163359423261Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage DNA binding protein2e-0961.2
NC_021066:5342127:535911053591105359376267Raoultella ornithinolytica B6, complete genomephage DNA binding protein2e-0961.2
NC_014500:3744705:376114837611483761351204Dickeya dadantii 3937 chromosome, complete genomeputative regulatory protein2e-0961.2
NC_015422:2806832:282494928249492825182234Alicycliphilus denitrificans K601 chromosome, complete genomephage transcriptional regulator AlpA3e-0960.8
NC_020211:996497:100966210096621009928267Serratia marcescens WW4, complete genomehypothetical protein3e-0960.8
NC_014306:4901390:494030849403084940574267Erwinia billingiae Eb661, complete genomePhage transcriptional regulator, AlpA-family2e-0960.8
NC_008800:1090000:109849810984981098698201Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein2e-0960.8
NC_009901:1516340:153082715308271531030204Shewanella pealeana ATCC 700345, complete genomephage transcriptional regulator, AlpA4e-0960.1
NC_011147:4460726:446200144620014462267267Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein6e-0959.3
NC_013421:1819036:184166718416671841861195Pectobacterium wasabiae WPP163, complete genomephage transcriptional regulator, AlpA7e-0959.3
NC_006511:4465495:446677144667714467101331Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC1e-0858.9
NC_014306:4376012:441108144110814411347267Erwinia billingiae Eb661, complete genomePhage transcriptional regulator, AlpA-family1e-0858.5
NC_012560:1677798:168635916863591686646288Azotobacter vinelandii DJ, complete genomeProphage CP4-57 regulatory, AlpA-like protein1e-0858.5
NC_021150:1677811:168637216863721686659288Azotobacter vinelandii CA6, complete genomeProphage CP4-57 regulatory, AlpA-like protein1e-0858.5
NC_011149:1987291:201618320161832016401219Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein1e-0858.5
NC_011205:2180598:221304722130472213265219Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-0858.5
NC_011274:2044000:207716020771602077378219Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91phage regulatory protein1e-0858.5
NC_011294:2053991:208603220860322086250219Salmonella enterica subsp. enterica serovar Enteritidis strphage regulatory protein1e-0858.5
NC_016831:947281:957204957204957422219Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative phage regulatory protein1e-0858.5
NC_018691:3525430:356425235642523564566315Alcanivorax dieselolei B5 chromosome, complete genomePhage transcriptional regulator, AlpA1e-0858.5
NC_007722:2993852:299950229995022999717216Erythrobacter litoralis HTCC2594, complete genomehypothetical protein1e-0858.2
NC_013592:2968500:299374929937492993943195Dickeya dadantii Ech586, complete genomephage transcriptional regulator, AlpA2e-0857.8
NC_009436:3367194:338079433807943381060267Enterobacter sp. 638, complete genomephage transcriptional regulator, AlpA2e-0857.8
NC_012917:833721:838409838409838669261Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage transcriptional regulator, AlpA2e-0857.8
NC_009092:1441813:145459814545981454783186Shewanella loihica PV-4, complete genomephage transcriptional regulator, AlpA3e-0857.4
NC_004631:4661000:467373846737384674061324Salmonella enterica subsp. enterica serovar Typhi Ty2, completephage DNA binding protein2e-0857.4
NC_003198:4676536:469084946908494691172324Salmonella enterica subsp. enterica serovar Typhi str. CT18,phage DNA binding protein2e-0857.4
NC_010468:49074:496614966149927267Escherichia coli ATCC 8739, complete genomephage transcriptional regulator, AlpA3e-0857
NC_015424:3520783:355680435568043556980177Aeromonas veronii B565 chromosome, complete genomeputative transcriptional regulator4e-0857
NC_020064:3609844:362729036272903627496207Serratia marcescens FGI94, complete genomeputative transcriptional regulator5e-0856.6
NC_009439:1297851:130657513065751306763189Pseudomonas mendocina ymp, complete genomephage transcriptional regulator, AlpA5e-0856.6
NC_013716:2139952:216269121626912162930240Citrobacter rodentium ICC168, complete genomehypothetical protein5e-0856.6
NC_010498:4072681:408781140878114088077267Escherichia coli SMS-3-5, complete genomeAlpA family transcriptional regulator4e-0856.6
NC_010468:1130000:115080511508051151071267Escherichia coli ATCC 8739, complete genomephage transcriptional regulator, AlpA4e-0856.6
NC_007613:4217557:422168542216854221951267Shigella boydii Sb227, complete genomehypothetical protein4e-0856.6
NC_011740:448000:452630452630452896267Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein of bacteriophage origin, putative COG3311, putative DNA binding4e-0856.6
NC_013361:4959323:495991949599194960185267Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA binding transcriptional regulator4e-0856.6
NC_008253:1938975:196845019684501968668219Escherichia coli 536, complete genomeputative regulatory protein5e-0856.2
NC_016832:948029:957798957798958013216Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein7e-0855.8
NC_020304:752012:772470772470772679210Desulfocapsa sulfexigens DSM 10523, complete genomeputative transcriptional regulator1e-0755.5
NC_008321:1993541:201135520113552011549195Shewanella sp. MR-4, complete genomephage transcriptional regulator, AlpA1e-0755.1
NC_009648:5119271:514087751408775141077201Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein1e-0755.1
NC_012731:600518:627192627192627392201Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein1e-0755.1
NC_011094:638552:652744652744652941198Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein1e-0755.1
NC_015224:3291736:331240633124063312600195Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,phage transcriptional regulator, AlpA1e-0755.1
NC_014972:247028:265810265810266025216Desulfobulbus propionicus DSM 2032 chromosome, complete genomephage transcriptional regulator, AlpA1e-0755.1
NC_017075:3165858:318963331896333189848216Rubrivivax gelatinosus IL144, complete genomeputative AlpA family transcriptional regulator2e-0754.7
NC_015379:2417312:246348524634852463706222Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transcription factor, AlpA family2e-0754.3
NC_008344:49039:121606121606121818213Nitrosomonas eutropha C91, complete genomephage transcriptional regulator, AlpA2e-0754.3
NC_012917:3684840:368998636899863690246261Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage transcriptional regulator, AlpA3e-0754.3
NC_009792:3225965:324232932423293242529201Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-0753.9
NC_012856:3270709:329098632909863291246261Ralstonia pickettii 12D chromosome 1, complete genomephage transcriptional regulator, AlpA3e-0753.5
NC_007347:2421942:242194224219422422205264Ralstonia eutropha JMP134 chromosome 1, complete sequenceProphage CP4-57 regulatory3e-0753.5
NC_007650:2429307:245447724544772454695219Burkholderia thailandensis E264 chromosome II, complete sequenceprophage regulatory protein AlpA family protein5e-0753.1
NC_006351:520500:526300526300526518219Burkholderia pseudomallei K96243 chromosome 2, complete sequenceDNA-binding protein5e-0753.1
NC_008782:1510000:151461215146121514824213Acidovorax sp. JS42, complete genomephage transcriptional regulator, AlpA6e-0752.8
NC_017033:2081206:210752221075222107743222Frateuria aurantia DSM 6220 chromosome, complete genomeputative transcriptional regulator6e-0752.8
NC_010322:768849:776374776374776583210Pseudomonas putida GB-1 chromosome, complete genomephage transcriptional regulator AlpA6e-0752.8
NC_007086:2477040:248606124860612486282222Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein6e-0752.8
NC_010688:2781624:279949727994972799718222Xanthomonas campestris pv. campestris, complete genomephage-related regulatory protein6e-0752.8
NC_009138:1974935:198388419838841984096213Herminiimonas arsenicoxydans, complete genomeputative CP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage8e-0752.4
NC_016944:514742:530410530410530610201Vibrio cholerae IEC224 chromosome I, complete sequencetranscriptional regulator9e-0752.4
NC_012668:83641:897378973789937201Vibrio cholerae MJ-1236 chromosome 1, complete sequencetranscriptional regulator9e-0752.4
NC_002505:514732:530402530402530602201Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional regulator9e-0752.4
NC_014923:3968000:397587739758773976080204Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeProphage CP4-57 regulatory1e-0652
NC_016631:2051475:205836320583632058578216Granulicella mallensis MP5ACTX8 chromosome, complete genomephage transcriptional regulator, AlpA2e-0651.6
NC_015731:1578106:159965415996541599836183Nitrosomonas sp. Is79A3 chromosome, complete genomephage transcriptional regulator AlpA2e-0651.6
NC_016002:2037374:204152720415272041703177Pseudogulbenkiania sp. NH8B, complete genomephage transcriptional regulator AlpA2e-0651.2
NC_010170:1324758:135213513521351352347213Bordetella petrii, complete genomeputative transcriptional regulator (phage-related)3e-0650.8
NC_015381:3607626:360814736081473608338192Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein3e-0650.8
NC_009256:458649:463834463834464040207Burkholderia vietnamiensis G4 chromosome 1, complete sequencephage transcriptional regulator AlpA4e-0650.1
NC_013456:2984491:299468929946892994889201Vibrio sp. Ex25 chromosome 1, complete genomephage transcriptional regulator AlpA6e-0649.7
NC_009792:4017510:402541840254184025576159Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein6e-0649.3
NC_010634:1342393:135171913517191351946228Yersinia pseudotuberculosis PB1/+, complete genomephage transcriptional regulator, AlpA7e-0649.3
NC_012691:2614603:262271626227162622955240Tolumonas auensis DSM 9187, complete genomephage transcriptional regulator, AlpA9e-0648.9