Pre_GI: BLASTP Hits

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Query: NC_008150:4634695:4653976 Yersinia pestis Antiqua, complete genome

Start: 4653976, End: 4654209, Length: 234

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from the Republic of Congo. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010468:694943:7060477060477085452499Escherichia coli ATCC 8739, complete genomefimbrial biogenesis outer membrane usher protein6e-1786.3
NC_014618:4114004:4139647413964741421482502Enterobacter cloacae SCF1 chromosome, complete genomefimbrial biogenesis outer membrane usher protein1e-1685.1
NC_011750:3683760:3692369369236936941741806Escherichia coli IAI39 chromosome, complete genome2e-1684.3
AP010958:3787991:3796733379673337992372505Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted outer membrane usher protein4e-1683.2
CU928160:3263248:3268841326884132713542514Escherichia coli IAI1 chromosome, complete genomeouter membrane usher protein4e-1683.2
CP002516:693703:7034787034787059822505Escherichia coli KO11, complete genomefimbrial biogenesis outer membrane usher protein4e-1683.2
NC_009801:3511444:3517046351704635195502505Escherichia coli E24377A, complete genomefimbrial usher protein4e-1683.2
CP002185:3393813:3400084340008434025972514Escherichia coli W, complete genomefimbrial biogenesis outer membrane usher protein4e-1683.2
CU928145:3529930:3536104353610435386172514Escherichia coli 55989 chromosome, complete genomeouter membrane usher protein4e-1683.2
NC_011748:3529930:3536104353610435386172514Escherichia coli 55989, complete genomeouter membrane usher protein4e-1683.2
NC_011415:3443851:3450166345016634526342469Escherichia coli SE11 chromosome, complete genomeputative fimbrial usher protein4e-1683.2
NC_011741:3263248:3268841326884132713542514Escherichia coli IAI1 chromosome, complete genomeouter membrane usher protein4e-1683.2
NC_013353:3787991:3796733379673337992372505Escherichia coli O103:H2 str. 12009, complete genomeouter membrane usher protein4e-1683.2
NC_013361:4102894:4109209410920941116772469Escherichia coli O26:H11 str. 11368 chromosome, complete genomeouter membrane usher protein4e-1683.2
NC_016822:3485631:3493539349353934960432505Shigella sonnei 53G, complete genomeputative outer membrane usher protein4e-1683.2
NC_016902:693703:7034787034787059822505Escherichia coli KO11FL chromosome, complete genomefimbrial biogenesis outer membrane usher protein4e-1683.2
NC_003198:3042000:3045457304545730479462490Salmonella enterica subsp. enterica serovar Typhi str. CT18,probable outer membrane fimbrial usher protein5e-1579.7
NC_004631:3030580:3031364303136430338532490Salmonella enterica subsp. enterica serovar Typhi Ty2, completeprobable outer membrane fimbrial usher protein5e-1579.7
NC_016832:3020000:3020004302000430224932490Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Fimbrial usher protein5e-1579.7
NC_013364:3840000:3847990384799038504942505Escherichia coli O111:H- str. 11128, complete genomeputative outer membrane usher protein5e-1579.7
NC_009800:3224575:3230856323085632333572502Escherichia coli HS, complete genomefimbrial usher protein7e-1579.3
NC_011083:3171171:3171171317117131736602490Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,fimbrial usher protein7e-1579.3
AC_000091:3180275:3186056318605631885212466Escherichia coli W3110 DNA, complete genomepredicted outer membrane usher protein1e-1478.6
NC_000913:3176000:3185422318542231878872466Escherichia coli K12, complete genomepredicted outer membrane usher protein1e-1478.6
NC_010473:3273882:3283167328316732856322466Escherichia coli str. K-12 substr. DH10B, complete genomepredicted outer membrane usher protein1e-1478.6
NC_012947:708064:7178387178387203512514Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completefimbrial biogenesis outer membrane usher protein1e-1478.6
NC_012967:3113768:3120233312023331227012469Escherichia coli B str. REL606 chromosome, complete genomeputative outer membrane usher protein1e-1478.6
NC_016612:627118:6335856335856360172433Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative outer membrane usher protein1e-1478.2
NC_015968:204969:2149782149782175092532Enterobacter asburiae LF7a chromosome, complete genomefimbrial biogenesis outer membrane usher protein4e-1476.6
NC_015761:299386:3423023423023447732472Salmonella bongori NCTC 12419, complete genomeouter membrane fimbrial usher protein9e-1475.5
NC_020181:4800298:4829851482985148311191269Enterobacter aerogenes EA1509E, complete genomeOuter membrane fimbrial usher porin precursor4e-1373.6
NC_015663:549425:5519065519065543772472Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative fimbrial usher protein4e-1373.6
CP002797:4775780:4775780477578047782902511Escherichia coli NA114, complete genomeFimbriae usher protein StfC1e-1271.6
NC_008253:4735418:4750281475028147528032523Escherichia coli 536, complete genomeouter membrane usher protein PapC precursor2e-1271.6
NC_007946:4779745:4793248479324847957582511Escherichia coli UTI89, complete genomeouter membrane usher protein PapC precursor2e-1271.2
NC_011750:4775770:4787118478711847896492532Escherichia coli IAI39 chromosome, complete genomeouter membrane usher protein PapC2e-1271.2
NC_004431:3409389:3433739343373934362612523Escherichia coli CFT073, complete genomePapC protein2e-1271.2
NC_011751:3453683:3457835345783534603662532Escherichia coli UMN026 chromosome, complete genomeOuter membrane usher protein PapC2e-1271.2
NC_011745:3627438:3635454363545436379762523Escherichia coli ED1a chromosome, complete genomeputative outer membrane usher protein2e-1270.9
NC_009832:5214850:5217798521779852203322535Serratia proteamaculans 568, complete genomefimbrial biogenesis outer membrane usher protein2e-1168.2
NC_013282:3781149:3791954379195437944612508Cronobacter turicensis, complete genomePutative outer membrane usher protein yfcU2e-1167.4
NC_004088:3859173:3862332386233238648122481Yersinia pestis KIM, complete genomeouter membrane usher protein3e-1167
NC_006155:3992818:3994683399468339971632481Yersinia pseudotuberculosis IP 32953, complete genomeouter membrane fimbrial usher porin3e-1167
NC_003143:741169:7584307584307609102481Yersinia pestis CO92, complete genomeouter membrane usher protein3e-1167
NC_010465:733916:7559337559337584132481Yersinia pseudotuberculosis YPIII, complete genomefimbrial biogenesis outer membrane usher protein3e-1167
NC_008149:650706:6672576672576697372481Yersinia pestis Nepal516, complete genomeouter membrane usher protein3e-1167
NC_016816:3333000:3348483334848333509722490Pantoea ananatis LMG 5342, complete genomefimbrial biogenesis outer membrane usher protein3e-1167
NC_012967:707083:7305107305107329602451Escherichia coli B str. REL606 chromosome, complete genomeputative outer membrane protein3e-1167
NC_009381:522731:5392815392815417612481Yersinia pestis Pestoides F chromosome, complete genomeouter membrane usher protein3e-1167
NC_014029:792719:8099758099758124552481Yersinia pestis Z176003 chromosome, complete genomeouter membrane usher protein3e-1167
NC_008150:3430000:3433214343321434356942481Yersinia pestis Antiqua, complete genomeouter membrane usher protein3e-1167
NC_010634:3905369:3906106390610639085862481Yersinia pseudotuberculosis PB1/+, complete genomefimbrial biogenesis outer membrane usher protein3e-1167
NC_010159:259695:2628542628542653342481Yersinia pestis Angola, complete genomefimbrial usher protein3e-1167
NC_017265:3724500:3727692372769237301722481Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,outer membrane usher protein3e-1167
NC_017168:341233:3443923443923468722481Yersinia pestis A1122 chromosome, complete genomeouter membrane usher protein3e-1167
NC_017160:737000:7543167543167567962481Yersinia pestis D182038 chromosome, complete genomeouter membrane usher protein3e-1167
NC_017154:734875:7521387521387546182481Yersinia pestis D106004 chromosome, complete genomeouter membrane usher protein3e-1167
NC_020211:379000:3803133803133828442532Serratia marcescens WW4, complete genomefimbrial biogenesis outer membrane usher protein7e-1165.9
NC_009832:4564752:4598672459867246012122541Serratia proteamaculans 568, complete genomefimbrial biogenesis outer membrane usher protein8e-1165.9
NC_015566:5197624:5199681519968152022242544Serratia sp. AS12 chromosome, complete genomefimbrial biogenesis outer membrane usher protein1e-1065.5
NC_020064:79422:7942279422819652544Serratia marcescens FGI94, complete genomeP pilus assembly protein, porin PapC9e-1165.5
NC_012962:820909:8254288254288280342607Photorhabdus asymbiotica, complete genomeouter membrane fimbrial usher protein mrfc1e-1065.1
NC_008253:3122148:3135091313509131376612571Escherichia coli 536, complete genomefimbrial usher protein PixC3e-1063.9
NC_020211:103371:1167541167541193452592Serratia marcescens WW4, complete genomefimbrial biogenesis outer membrane usher protein4e-1063.2
NC_021066:4906239:4913383491338349158902508Raoultella ornithinolytica B6, complete genomefimbrial biogenesis outer membrane usher protein1e-0962
NC_013508:2356865:2371300237130023738462547Edwardsiella tarda EIB202, complete genomeP pilus assembly protein, porin PapC3e-0960.5
NC_015424:525039:5318395318395343732535Aeromonas veronii B565 chromosome, complete genomeouter membrane usher protein9e-0958.9
NC_008570:546736:5538885538885564222535Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeouter membrane usher protein3e-0857.4
NC_009348:4011160:4017991401799140205222532Aeromonas salmonicida subsp. salmonicida A449, complete genometype I pilus usher protein FimC4e-0856.6
NC_020211:689451:6920716920716945932523Serratia marcescens WW4, complete genomeouter membrane usher protein PapC1e-0755.5
NC_016831:2667561:2678322267832226808322511Salmonella enterica subsp. enterica serovar Gallinarum/pullorumatypical fimbria outer membrane usher3e-0650.4
NC_016832:2612809:2631870263187026343802511Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Outer-membrane fimbrial usher protein3e-0650.4
NC_003198:331314:3436333436333461432511Salmonella enterica subsp. enterica serovar Typhi str. CT18,outer-membrane fimbrial usher protein3e-0650.4
NC_004631:2615908:2634970263497026374802511Salmonella enterica subsp. enterica serovar Typhi Ty2, completeouter-membrane fimbrial usher protein3e-0650.4
NC_010102:2762304:2771228277122827737382511Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-0649.7
NC_016857:329849:3430443430443455542511Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative fimbrial usher7e-0649.3
NC_016856:332771:3442513442513467612511Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative fimbrial usher7e-0649.3
NC_016810:329849:3430443430443455542511Salmonella enterica subsp. enterica serovar Typhimurium stratypical fimbria outer membrane usher7e-0649.3
NC_011080:333121:3480733480733505832511Salmonella enterica subsp. enterica serovar Newport str. SL254,outer-membrane fimbrial usher protein7e-0649.3
NC_003197:332086:3435663435663460762511Salmonella typhimurium LT2, complete genomeputative fimbrial usher7e-0649.3
NC_016860:332087:3435673435673460772511Salmonella enterica subsp. enterica serovar Typhimurium strputative fimbrial usher protein7e-0649.3
NC_016863:332060:3435403435403460502511Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative fimbrial usher7e-0649.3
NC_011205:329155:3471863471863496962511Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853outer-membrane fimbrial usher protein7e-0649.3
NC_011294:311796:3231013231013256112511Salmonella enterica subsp. enterica serovar Enteritidis stratypical fimbria outer membrane usher7e-0649.3
NC_011149:309556:3248633248633273732511Salmonella enterica subsp. enterica serovar Agona str. SL483,outer-membrane fimbrial usher protein7e-0649.3
NC_011094:334267:3445083445083470182511Salmonella enterica subsp. enterica serovar Schwarzengrund strouter-membrane fimbrial usher protein7e-0649.3
NC_006511:2540500:2559697255969725622072511Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCouter-membrane fimbrial usher protein7e-0649.3
NC_011147:2536000:2555233255523325577432511Salmonella enterica subsp. enterica serovar Paratyphi A strouter-membrane fimbrial usher protein7e-0649.3
NC_017046:329847:3431293431293455522424Salmonella enterica subsp. enterica serovar Typhimurium str. 798atypical fimbria outer membrane usher8e-0649.3