Pre_GI: BLASTP Hits

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Query: NC_008150:4561633:4578980 Yersinia pestis Antiqua, complete genome

Start: 4578980, End: 4580164, Length: 1185

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from the Republic of Congo. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:3982020:3982020398202039832041185Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,sodium-proton antiporter0679
NC_006155:713174:7280537280537292371185Yersinia pseudotuberculosis IP 32953, complete genomeNhaA family of transport protein, Na+/H antiporter0679
NC_010465:3958766:3958766395876639599501185Yersinia pseudotuberculosis YPIII, complete genomeNa+/H+ antiporter NhaA0679
NC_008149:402599:4199464199464211301185Yersinia pestis Nepal516, complete genomesodium-proton antiporter0679
NC_004088:4116676:4116676411667641178601185Yersinia pestis KIM, complete genomeNa+/H antiporter, pH dependent0679
NC_003143:483395:5007435007435019271185Yersinia pestis CO92, complete genomesodium-proton antiporter0679
NC_009381:3596000:3597110359711035982941185Yersinia pestis Pestoides F chromosome, complete genomepH-dependent sodium/proton antiporter0679
NC_014029:536000:5542365542365554201185Yersinia pestis Z176003 chromosome, complete genomesodium-proton antiporter0679
NC_017160:479411:4985784985784997621185Yersinia pestis D182038 chromosome, complete genomesodium-proton antiporter0679
NC_017168:601928:6019286019286031121185Yersinia pestis A1122 chromosome, complete genomepH-dependent sodium/proton antiporter0679
NC_009708:3903598:3903598390359839047821185Yersinia pseudotuberculosis IP 31758 chromosome, complete genomepH-dependent sodium/proton antiporter0676
NC_010159:809663:8106928106928118761185Yersinia pestis Angola, complete genomeNa+/H+ antiporter NhaA0675
NC_017154:478000:496387496387497364978Yersinia pestis D106004 chromosome, complete genomesodium-proton antiporter2e-151535
NC_015424:3890293:3914099391409939152891191Aeromonas veronii B565 chromosome, complete genomeNa(+)/H(+) antiporter nhaA3e-134478
NC_016612:2223357:2244103224410322452781176Klebsiella oxytoca KCTC 1686 chromosome, complete genomepH-dependent sodium/proton antiporter2e-118426
NC_011748:11394:1615216152173181167Escherichia coli 55989, complete genomepH-dependent sodium/proton antiporter2e-117422
NC_007384:16500:2057220572217381167Shigella sonnei Ss046, complete genomeNa+/H+ antiporter, pH dependent2e-117422
CU928160:11381:1613916139173051167Escherichia coli IAI1 chromosome, complete genomesodium-proton antiporter2e-117422
NC_010468:3970995:3983646398364639848121167Escherichia coli ATCC 8739, complete genomeNa+/H+ antiporter NhaA2e-117422
NC_009801:11921:1741817418185841167Escherichia coli E24377A, complete genomeNa+/H+ antiporter NhaA2e-117422
NC_002655:12000:1615716157173231167Escherichia coli O157:H7 EDL933, complete genomeNa+/H antiporter, pH dependent2e-117422
CU928145:11394:1615216152173181167Escherichia coli 55989 chromosome, complete genomesodium-proton antiporter2e-117422
CP002516:4081484:4093318409331840944841167Escherichia coli KO11, complete genomeNa+/H+ antiporter NhaA2e-117422
NC_011751:12000:1609716097172631167Escherichia coli UMN026 chromosome, complete genomepH-dependent sodium/proton antiporter2e-117422
NC_009800:12162:1748817488186541167Escherichia coli HS, complete genomeNa+/H+ antiporter NhaA2e-117422
AP010958:12660:1741817418185841167Escherichia coli O103:H2 str. 12009 DNA, complete genomesodium-proton antiporter NhaA2e-117422
CP002185:11921:1741817418185841167Escherichia coli W, complete genometoxic membrane protein, small2e-117422
NC_002695:12000:1615716157173231167Escherichia coli O157:H7 str. Sakai, complete genomeNa+/H antiporter2e-117422
NC_016902:4081484:4093318409331840944841167Escherichia coli KO11FL chromosome, complete genomeNa+/H+ antiporter NhaA2e-117422
NC_016822:15401:1979319793209591167Shigella sonnei 53G, complete genomepH-dependent sodium/proton antiporter2e-117422
NC_013364:11382:1612516125172911167Escherichia coli O111:H- str. 11128, complete genomesodium-proton antiporter NhaA2e-117422
NC_013361:11382:1614016140173061167Escherichia coli O26:H11 str. 11368 chromosome, complete genomepH-dependent sodium/proton antiporter2e-117422
NC_013353:12660:1741817418185841167Escherichia coli O103:H2 str. 12009, complete genomesodium-proton antiporter NhaA2e-117422
NC_013008:11938:1615716157173231167Escherichia coli O157:H7 str. TW14359 chromosome, complete genomepH-dependent sodium/proton antiporter2e-117422
NC_012967:12161:1748817488186541167Escherichia coli B str. REL606 chromosome, complete genomepH-dependent sodium/proton antiporter2e-117422
NC_012947:3753375:3765068376506837662341167Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completepH-dependent sodium/proton antiporter2e-117422
NC_011741:11381:1613916139173051167Escherichia coli IAI1 chromosome, complete genomepH-dependent sodium/proton antiporter2e-117422
NC_011415:11381:1613916139173051167Escherichia coli SE11 chromosome, complete genomepH-dependent sodium/proton antiporter2e-117422
NC_011353:12000:1615716157173231167Escherichia coli O157:H7 str. EC4115 chromosome, complete genomepH-dependent sodium/proton antiporter2e-117422
NC_011750:12047:1995019950211161167Escherichia coli IAI39 chromosome, complete genomepH-dependent sodium/proton antiporter6e-117421
NC_011274:25692:4607546075472411167Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pH-dependent sodium/proton antiporter5e-117421
NC_013941:12000:1613916139173051167Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeSodium/proton antiporter nhaA5e-117421
NC_011149:25760:4618746187473531167Salmonella enterica subsp. enterica serovar Agona str. SL483,Na+/H+ antiporter NhaA3e-116418
NC_010102:25893:4053540535417011167Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-116418
NC_011080:25751:4618146181473471167Salmonella enterica subsp. enterica serovar Newport str. SL254,Na+/H+ antiporter NhaA3e-116418
NC_016832:25807:4618646186473521167Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Sodium/proton antiporter NhaA5e-116418
NC_011147:25836:4619646196473621167Salmonella enterica subsp. enterica serovar Paratyphi A strpH-dependent sodium/proton antiporter5e-116418
NC_004631:25807:4618646186473521167Salmonella enterica subsp. enterica serovar Typhi Ty2, completeNa(+)/H(+) antiporter 15e-116418
NC_003198:25807:4618646186473521167Salmonella enterica subsp. enterica serovar Typhi str. CT18,Na(+)/H(+) antiporter 15e-116418
NC_006511:25796:4615646156473221167Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCNa(+)/H(+) antiporter 15e-116418
NC_003197:25803:4619046190473561167Salmonella typhimurium LT2, complete genomeNa+/H antiporter3e-116418
NC_011094:25762:4618946189473551167Salmonella enterica subsp. enterica serovar Schwarzengrund strpH-dependent sodium/proton antiporter3e-116418
NC_011205:25805:4618846188473541167Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853pH-dependent sodium/proton antiporter3e-116418
NC_017046:25758:4619146191473571167Salmonella enterica subsp. enterica serovar Typhimurium str. 798Na(+)/H(+) antiporter 13e-116418
NC_016863:25804:4619146191473571167Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1pH-dependent sodium/proton antiporter3e-116418
NC_016860:25758:4619046190473561167Salmonella enterica subsp. enterica serovar Typhimurium strpH-dependent sodium/proton antiporter3e-116418
NC_016857:25803:4619046190473561167Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74pH-dependent sodium/proton antiporter3e-116418
NC_016856:25803:4619046190473561167Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SpH-dependent sodium/proton antiporter3e-116418
NC_016831:25760:4618846188473541167Salmonella enterica subsp. enterica serovar Gallinarum/pullorumNa(+)/H(+) antiporter 13e-116418
NC_016810:25803:4619046190473561167Salmonella enterica subsp. enterica serovar Typhimurium strNa(+)/H(+) antiporter 13e-116418
NC_011294:25569:4594445944471101167Salmonella enterica subsp. enterica serovar Enteritidis strpH-dependent sodium/proton antiporter3e-116418
NC_008750:3435495:3440720344072034418891170Shewanella sp. W3-18-1, complete genomeNa+/H+ antiporter NhaA1e-109397
NC_009438:1282022:1290934129093412921091176Shewanella putrefaciens CN-32 chromosome, complete genomepH-dependent sodium/proton antiporter1e-109396
NC_011566:3994239:4002938400293840040351098Shewanella piezotolerans WP3, complete genomeNa+/H+ antiporter3e-103375
NC_007498:1611986:1630817163081716320071191Pelobacter carbinolicus DSM 2380, complete genomeNa+/H+ antiporter NhaA3e-97355
NC_014121:489500:4913424913424924991158Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative sodium-proton antiporter NhaA3e-82305
NC_007005:4992730:5014645501464550158231179Pseudomonas syringae pv. syringae B728a, complete genomeNa+/H+ antiporter NhaA2e-79296
NC_011916:467106:4715424715424727831242Caulobacter crescentus NA1000 chromosome, complete genomepH-dependent sodium/proton antiporter6e-79294
NC_010602:420284:4217264217264230841359Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'sodium:proton antiporter3e-77289
NC_010842:425854:4272964272964286541359Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeNa+/H+ antiporter3e-77289
NC_007519:2773000:2773064277306427744161353Desulfovibrio alaskensis G20 chromosome, complete genomeNa+/H+ antiporter NhaA4e-73275
NC_013520:718732:7319197319197330911173Veillonella parvula DSM 2008, complete genomeNa+/H+ antiporter NhaA4e-72271
NC_009749:77583:7987779877810281152Francisella tularensis subsp. holarctica FTA, complete genomeNa+/H+ antiporter NhaA1e-70266
NC_008245:1845525:1848371184837118495221152Francisella tularensis subsp. tularensis FSC 198, complete genomeNa(+)/H(+) antiporter 12e-70266
NC_009257:5615:2308323083242341152Francisella tularensis subsp. tularensis WY96-3418 chromosome,pH-dependent sodium/proton antiporter6e-70265
NC_008314:477722:4969084969084983141407Ralstonia eutropha H16 chromosome 2, complete sequenceNa+/H+ antiporter 13e-68259
NC_014759:2438492:2464203246420324655311329Marivirga tractuosa DSM 4126 chromosome, complete genomesodium/proton antiporter, nhaa family6e-68258
NC_008347:2515921:2544823254482325460341212Maricaulis maris MCS10, complete genomeNa+/H+ antiporter NhaA1e-67257
NC_020829:940692:9660059660059673631359Pseudomonas denitrificans ATCC 13867, complete genomeNa+/H+ antiporter NhaA8e-68257
NC_013526:439813:4554554554554568221368Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeNa+/H+ antiporter NhaA2e-67256
NC_014393:4352216:4379961437996143811721212Clostridium cellulovorans 743B chromosome, complete genomeNa+/H+ antiporter NhaA2e-66253
NC_015510:4674774:4674774467477446759461173Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeNa(+)/H(+) antiporter nhaA2e-65249
NC_014314:1148000:1177809117780911791581350Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeNa+/H+ antiporter NhaA3e-65249
NC_017187:1305805:1309998130999813112931296Arcobacter butzleri ED-1, complete genomesodium-hydrogen antiporter5e-64245
NC_009512:2108686:2138951213895121403121362Pseudomonas putida F1, complete genomeNa+/H+ antiporter NhaA2e-63243
NC_017986:4790482:4838563483856348399241362Pseudomonas putida ND6 chromosome, complete genomeNa+/H+ antiporter NhaA3e-63242
NC_009714:727679:7456377456377468751239Campylobacter hominis ATCC BAA-381, complete genomeNa+/H+ antiporter NhaA3e-62239
NC_007298:750361:7586097586097597781170Dechloromonas aromatica RCB, complete genomeNa+/H+ antiporter NhaA4e-61235
NC_008554:3177723:3177723317772331791411419Syntrophobacter fumaroxidans MPOB, complete genomeNa+/H+ antiporter NhaA2e-60233
NC_013520:718732:7307107307107318821173Veillonella parvula DSM 2008, complete genomeNa+/H+ antiporter NhaA7e-60231
NC_008095:4669947:4688594468859446899431350Myxococcus xanthus DK 1622, complete genomeNa+/H+ antiporter NhaA3e-59229
NC_014623:5350116:5353032535303253543691338Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeNa(+)/H(+) antiporter NhaA2e-57223
NC_015681:1201926:1201926120192612032871362Thermodesulfatator indicus DSM 15286 chromosome, complete genomeNa+/H+ antiporter NhaA4e-57222
NC_013943:124500:1411591411591424811323Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeNa+/H+ antiporter NhaA8e-57221
NC_009614:4802000:4813649481364948149891341Bacteroides vulgatus ATCC 8482 chromosome, complete genomeNa+/H+ antiporter1e-56220
NC_009615:1067603:1068925106892510702861362Parabacteroides distasonis ATCC 8503 chromosome, complete genomeNa+/H+ antiporter2e-56219
NC_009467:117812:1272291272291285991371Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequenceNa+/H+ antiporter NhaA8e-55214
NC_014370:885937:8887948887948901191326Prevotella melaninogenica ATCC 25845 chromosome chromosome I,Na+/H+ antiporter NhaA5e-54211
NC_004460:708416:7297357297357310781344Vibrio vulnificus CMCP6 chromosome II, complete sequenceNa+/H+ antiporter1e-53211
NC_015410:3093465:3101374310137431026751302Pseudomonas mendocina NK-01 chromosome, complete genomeNa+/H+ antiporter NhaA1e-53210
NC_014958:3094500:3111018311101831122861269Deinococcus maricopensis DSM 21211 chromosome, complete genomeNa(+)/H(+) antiporter nhaA3e-52206
NC_018000:1207231:1220355122035512217431389Sinorhizobium fredii USDA 257 chromosome, complete genomeNa(+)/H(+) antiporter NhaA3e-52206
NC_015580:2444845:2452938245293824541341197Novosphingobium sp. PP1Y, complete genomeNa+/H+ antiporter NhaA9e-52204
NC_009953:2867864:2869738286973828710931356Salinispora arenicola CNS-205 chromosome, complete genomeNa+/H+ antiporter NhaA6e-50198
NC_013960:1778411:1792517179251717943521836Nitrosococcus halophilus Nc4 chromosome, complete genomeNa+/H+ antiporter NhaA1e-49197
NC_013235:422565:4372224372224385351314Nakamurella multipartita DSM 44233, complete genomeNa+/H+ antiporter NhaA1e-48194
NC_015914:5470926:5473561547356154749371377Cyclobacterium marinum DSM 745 chromosome, complete genomeNa(+)/H(+) antiporter nhaA1e-47190
NC_013440:8717500:8724064872406487254911428Haliangium ochraceum DSM 14365, complete genomeNa+/H+ antiporter NhaA1e-47190
NC_015656:2565417:2583823258382325857061884Frankia symbiont of Datisca glomerata chromosome, complete genomeNa(+)/H(+) antiporter nhaA3e-46186
NC_014830:532122:5381865381865395231338Intrasporangium calvum DSM 43043 chromosome, complete genomesodium/proton antiporter, NhaA family5e-45182
NC_008699:2916752:2934065293406529352461182Nocardioides sp. JS614, complete genome3e-43176
NC_014041:4335948:4340562434056243419111350Zunongwangia profunda SM-A87 chromosome, complete genomesodium/proton antiporter8e-42171
NC_009380:1885024:1901057190105719030151959Salinispora tropica CNB-440 chromosome, complete genomeNa+/H+ antiporter NhaA4e-41169
NC_010617:263985:2816362816362834891854Kocuria rhizophila DC2201, complete genomeNa(+)/H(+) antiporter4e-37155
NC_006677:2575345:258267625826762583281606Gluconobacter oxydans 621H, complete genomeNa+/H+ antiporter NhaA5e-29129
NC_009883:1492425:151768515176851518191507Rickettsia bellii OSU 85-389, complete genomeNa+/H+ antiporter NhaA1e-24114
NC_020209:1949500:196920919692091969976768Pseudomonas poae RE*1-1-14, complete genomepH-dependent sodium/proton antiporter4e-21102
NC_006677:2575345:258207225820722582836765Gluconobacter oxydans 621H, complete genomeNa+/H+ antiporter1e-1894.7
NC_017955:3731480:377979537797953780364570Modestobacter marinus, complete genome5e-1789
NC_007940:1485006:151098915109891511387399Rickettsia bellii RML369-C, complete genomeNa+/H+ antiporter NhaA1e-1687.8
NC_018720:47984:6893668936705761641Bifidobacterium asteroides PRL2011 chromosome, complete genometransporter, probably NhaA Na+:2H+ antiporter6e-1685.5
NC_017986:331610:340748340748341128381Pseudomonas putida ND6 chromosome, complete genomeNa+/H+ antiporter NhaA2e-1583.6
NC_012918:1814000:1833214183321418343621149Geobacter sp. M21 chromosome, complete genomeNa+/H+ antiporter NhaA5e-1582.4
NC_008711:1224164:1226525122652512275291005Arthrobacter aurescens TC1, complete genome2e-1273.6
NC_010172:573046:582224582224582496273Methylobacterium extorquens PA1, complete genomeNa+/H+ antiporter6e-0962.4