Pre_GI: BLASTP Hits

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Query: NC_008150:4373722:4386953 Yersinia pestis Antiqua, complete genome

Start: 4386953, End: 4389016, Length: 2064

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from the Republic of Congo. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004088:4202247:4215478421547842175442067Yersinia pestis KIM, complete genomehypothetical protein01353
NC_010159:1288000:1291081129108112931442064Yersinia pestis Angola, complete genomehypothetical protein01352
NC_008149:318860:3222573222573243202064Yersinia pestis Nepal516, complete genomehypothetical protein01352
NC_003143:398748:4030494030494051122064Yersinia pestis CO92, complete genomehypothetical protein01352
NC_005810:4306716:4319776431977643218392064Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein01352
NC_014029:452248:4565494565494586122064Yersinia pestis Z176003 chromosome, complete genomehypothetical protein01352
NC_017154:394401:3987013987014007642064Yersinia pestis D106004 chromosome, complete genomehypothetical protein01352
NC_017160:396600:4009014009014029642064Yersinia pestis D182038 chromosome, complete genomehypothetical protein01352
NC_017168:687471:7007027007027027652064Yersinia pestis A1122 chromosome, complete genomehypothetical protein01352
NC_017265:4065625:4078856407885640809192064Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein01352
NC_009381:3680638:3693891369389136959542064Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein01350
NC_011601:4856717:4870147487014748722012055Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeMcrB family protein, GTPase subunit of restriction endonuclease01078
NC_015740:3631326:3645611364561136474521842Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeGTPase subunit of restriction endonuclease-like protein2e-104380
NC_009665:2352528:2358338235833823601551818Shewanella baltica OS185 chromosome, complete genomeGTPase subunit of restriction endonuclease-like protein2e-94347
NC_010163:614634:6575056575056599492445Acholeplasma laidlawii PG-8A chromosome, complete genomeMcrBC 5-methylcytosine restriction system component3e-79296
NC_002163:129800:1402891402891426402352Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomeputative endonuclease2e-78293
NC_007005:4411388:4433777443377744353301554Pseudomonas syringae pv. syringae B728a, complete genomeATPas3e-77290
NC_015581:1731120:1731120173112017329671848Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeATPase2e-71270
NC_009800:4529504:4538288453828845403632076Escherichia coli HS, complete genomeputative ATPase family associated with various cellular activities (AAA)9e-68258
CP002185:4791811:4795728479572847978032076Escherichia coli W, complete genomeputative 5-methylcytosine-specific restriction enzyme with GTPase activity9e-68258
CP002516:4199133:4215067421506742171422076Escherichia coli KO11, complete genomeATPase associated with various cellular activities AAA_59e-68258
NC_016902:4199133:4215067421506742171422076Escherichia coli KO11FL chromosome, complete genomeATPase9e-68258
NC_011750:4978000:4980740498074049818251086Escherichia coli IAI39 chromosome, complete genome9e-68258
CP002797:4411763:4438350443835044404252076Escherichia coli NA114, complete genomePutative GTPase8e-67255
NC_017986:1885613:1925320192532019279442625Pseudomonas putida ND6 chromosome, complete genomeATPase6e-57223
NC_012779:996879:1006078100607810083032226Edwardsiella ictaluri 93-146, complete genomeATPase associated with various cellular activities, AAA_55e-57223
NC_015458:2338437:2357103235710323599942892Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein5e-57223
NC_009512:5166459:5179356517935651819442589Pseudomonas putida F1, complete genomeATPase associated with various cellular activities, AAA_56e-57222
NC_016002:1048420:1068363106836310707442382Pseudogulbenkiania sp. NH8B, complete genome5-methylcytosine-specific restriction protein McrB9e-57222
NC_007509:1043602:1050923105092310530132091Burkholderia sp. 383 chromosome 3, complete sequenceGTPase subunit of restriction endonuclease-like6e-56219
NC_015562:1413264:1420598142059814226312034Methanotorris igneus Kol 5 chromosome, complete genomeATPase7e-56219
NC_008313:1:1477314773171512379Ralstonia eutropha H16 chromosome 1, complete sequence5-Methylcytosine-specific restriction enzyme B1e-55218
NC_020207:1346579:1379793137979313822102418Enterococcus faecium NRRL B-2354, complete genomemcrB2e-53211
NC_017047:4298207:4301801430180143033721572Rahnella aquatilis HX2 chromosome, complete genomeATPase AAA3e-53210
NC_015061:4203767:4207860420786042094311572Rahnella sp. Y9602 chromosome, complete genomeATPase associated with various cellular activities AAA_53e-53210
NC_015508:296856:3170493170493194242376Agrobacterium sp. H13-3 chromosome linear, complete sequenceATPase2e-52207
NC_020181:3328844:3356089335608933588722784Enterobacter aerogenes EA1509E, complete genomehypothetical protein6e-52206
NC_015167:3469968:3474883347488334771142232Cellulophaga lytica DSM 7489 chromosome, complete genomeATPase3e-51203
NC_018721:943801:9546929546929566171926Psychroflexus torquis ATCC 700755 chromosome, complete genome5-methylcytosine restriction component McrB7e-49195
NC_011757:3486283:3489548348954834917192172Methylobacterium chloromethanicum CM4, complete genomeATPase associated with various cellular activities AAA_52e-48194
NC_015663:2090442:2107000210700021089821983Enterobacter aerogenes KCTC 2190 chromosome, complete genomeMcrB-like protein1e-46188
NC_010943:493002:5057195057195082802562Stenotrophomonas maltophilia K279a, complete genomehypothetical protein1e-45185
NC_006624:873525:8817518817518842372487Thermococcus kodakarensis KOD1, complete genomeputative 5-methylcytosine restriction system, GTPase subunit6e-43176
NC_016816:3974895:3986393398639339885642172Pantoea ananatis LMG 5342, complete genome5-methylcytosine-specific restriction enzyme B3e-41170
NC_013595:2592590:2597891259789126003592469Streptosporangium roseum DSM 43021, complete genomeGTPase subunit of restriction endonuclease-like protein9e-39162
NC_009338:3359500:3384873338487333869752103Mycobacterium gilvum PYR-GCK chromosome, complete genomeATPase2e-35150
NC_010424:422029:4432404432404445381299Candidatus Desulforudis audaxviator MP104C, complete genome1e-33145
NC_019903:1345585:1345585134558513478672283Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,GTPase subunit of restriction endonuclease6e-32139
NC_015388:1020747:1024968102496810272352268Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeATPase associated with various cellular activities AAA_55e-31136
NC_011750:4978000:498183249818324982815984Escherichia coli IAI39 chromosome, complete genome3e-29130
NC_009074:3409849:3427890342789034298902001Burkholderia pseudomallei 668 chromosome I, complete sequenceAAA_5 ATPase4e-29130
NC_006396:2115334:2131282213128221329161635Haloarcula marismortui ATCC 43049 chromosome I, complete sequencehypothetical protein2e-26121
NC_013158:1686239:1697515169751516997792265Halorhabdus utahensis DSM 12940, complete genomeATPase associated with various cellular activities AAA_55e-26120
NC_013595:8603188:8618950861895086210462097Streptosporangium roseum DSM 43021, complete genomeGTPase subunit of restriction endonuclease-like protein1e-25118
NC_020388:1479568:1535400153540015377392340Natronomonas moolapensis 8.8.11 complete genomeAAA-type ATPase domain protein3e-25117
NC_013131:8029621:8048620804862080505001881Catenulispora acidiphila DSM 44928, complete genomeATPase associated with various cellular activities AAA_51e-24115
NC_008705:868623:9259519259519277801830Mycobacterium sp. KMS, complete genomeATPase associated with various cellular activities, AAA_51e-24115
NC_008146:861319:9172229172229190511830Mycobacterium sp. MCS, complete genomeATPase associated with various cellular activities, AAA_51e-24115
NC_016048:3947663:3958317395831739601791863Oscillibacter valericigenes Sjm18-20, complete genomeputative 5-methylcytosine-specific restriction enzyme B2e-24114
NC_008009:4421992:4433043443304344354602418Acidobacteria bacterium Ellin345, complete genomeATPase associated with various cellular activities, AAA_56e-24113
NC_015873:2197412:2205991220599122083992409Megasphaera elsdenii DSM 20460, complete genome5-methylcytosine-specific restriction enzyme B6e-24113
NC_010617:774914:8136028136028151851584Kocuria rhizophila DC2201, complete genomeMcrBC restriction endonuclease system protein McrB4e-24113
NC_016023:1959255:1973077197307719754912415Bacillus coagulans 36D1 chromosome, complete genomeATPase7e-23109
NC_012759:4501206:4514465451446545158441380Escherichia coli BW2952 chromosome, complete genome5-methylcytosine-specific restriction enzyme subunit McrB8e-23109
AC_000091:4569379:4582638458263845840171380Escherichia coli W3110 DNA, complete genome5-methylcytosine-specific restriction enzyme McrBC, subunit McrB8e-23109
NC_013203:1351941:1359570135957013617682199Atopobium parvulum DSM 20469, complete genomeATPase associated with various cellular activities AAA_51e-22108
NC_010625:1551430:1575500157550015778452346Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceATPase associated with various cellular activities AAA_54e-22107
NC_014391:1967167:1975040197504019770492010Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeATPase3e-22107
NC_007969:1095438:1116101111610111185332433Psychrobacter cryohalolentis K5, complete genomeATPase associated with various cellular activities, AAA_57e-22106
NC_004757:2730057:2765586276558627678082223Nitrosomonas europaea ATCC 19718, complete genomeAAA ATPase superfamily9e-22105
NC_013929:7278414:7302598730259873044541857Streptomyces scabiei 87.22 chromosome, complete genomeATPase6e-21103
NC_014151:3663295:3670100367010036722892190Cellulomonas flavigena DSM 20109 chromosome, complete genomeATPase associated with various cellular activities AAA_59e-21102
NC_020126:7661551:7675299767529976767051407Myxococcus stipitatus DSM 14675, complete genome5-methylcytosine-specific restriction enzyme B6e-2099.8
NC_015588:1213873:1230453123045312332902838Isoptericola variabilis 225 chromosome, complete genomeATPase associated with various cellular activities AAA_56e-2099.8
NC_014762:1715190:1722228172222817241021875Sulfuricurvum kujiense DSM 16994 chromosome, complete genomeATPase associated with various cellular activities AAA_52e-1997.8
NC_008697:55406:7055370553732522700Nocardioides sp. JS614 plasmid pNOCA01, complete sequenceATPase associated with various cellular activities, AAA_57e-1996.3
NC_013971:73037:9141891418930221605Erwinia amylovora ATCC 49946 chromosome, complete genomerestriction enzyme3e-1790.9
NC_013961:73037:9141891418930221605Erwinia amylovora, complete genomeATPase3e-1790.9
NC_014830:13179:4125041250430491800Intrasporangium calvum DSM 43043 chromosome, complete genomeATPase associated with various cellular activities AAA_53e-1790.9
NC_010337:1999405:2014379201437920158571479Heliobacterium modesticaldum Ice1, complete genomeGTPase subunit of restriction endonuclease, putative3e-1584.3
NC_016887:4343830:4355709435570943568931185Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein3e-1584.3
NC_015581:680460:7006777006777023501674Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeATPase1e-1482
NC_009802:352641:3757523757523775241773Campylobacter concisus 13826, complete genomethiamine-phosphate pyrophosphorylase3e-1480.9
NC_016111:4115097:4134447413444741355891143Streptomyces cattleya NRRL 8057, complete genomeATPase2e-1274.7
NC_007973:2888824:290212929021292903040912Ralstonia metallidurans CH34 chromosome 1, complete sequenceATPase associated with various cellular activities, AAA_54e-1273.9
NC_014393:4775452:4829138482913848317112574Clostridium cellulovorans 743B chromosome, complete genomehypothetical protein4e-1170.9
NC_020125:1802000:1804061180406118054491389Riemerella anatipestifer RA-CH-2, complete genomehypothetical protein2e-1068.6
NC_014738:2011554:2032454203245420338421389Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,ATPase2e-1068.6
NC_014560:171931:1835371835371848831347Helicobacter pylori SJM180 chromosome, complete genomeputative restriction enzyme2e-1068.2
NC_009802:352641:3628873628873641251239Campylobacter concisus 13826, complete genomepolysulfide reductase chain C (Sulfur reductase chain C)4e-1067.4
NC_000964:649781:6601446601446611751032Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-0861.6
NC_015275:309133:3091333091333109651833Clostridium lentocellum DSM 5427 chromosome, complete genomeATPase associated with various cellular activities AAA_52e-0861.6
NC_014828:1335154:1360631136063113623581728Ethanoligenens harbinense YUAN-3 chromosome, complete genomeATPase associated with various cellular activities AAA_55e-0860.5
NC_012778:1819559:1851722185172218536051884Eubacterium eligens ATCC 27750, complete genomehypothetical protein2e-0758.2
NC_011769:247202:2584272584272599591533Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeATPase associated with various cellular activities AAA_53e-0757.8
NC_013922:331847:3646383646383658701233Natrialba magadii ATCC 43099 chromosome, complete genomeATPase associated with various cellular activities AAA_57e-0756.6
NC_020388:1869000:1879626187962618808551230Natronomonas moolapensis 8.8.11 complete genomeAAA-type ATPase domain protein1e-0655.8