Pre_GI: BLASTP Hits

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Query: NC_008150:4373722:4385640 Yersinia pestis Antiqua, complete genome

Start: 4385640, End: 4386956, Length: 1317

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from the Republic of Congo. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:4065625:4077543407754340788591317Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein0910
NC_008149:318860:3243173243173256331317Yersinia pestis Nepal516, complete genomehypothetical protein0910
NC_003143:398748:4051094051094064251317Yersinia pestis CO92, complete genomehypothetical protein0910
NC_004088:4202247:4214165421416542154811317Yersinia pestis KIM, complete genomehypothetical protein0910
NC_010159:1288000:1293141129314112944571317Yersinia pestis Angola, complete genomehypothetical protein0910
NC_005810:4306716:4318463431846343197791317Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein0910
NC_009381:3680638:3692578369257836938941317Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein0910
NC_014029:452248:4586094586094599251317Yersinia pestis Z176003 chromosome, complete genomehypothetical protein0910
NC_017154:394401:4007614007614020771317Yersinia pestis D106004 chromosome, complete genomehypothetical protein0910
NC_017160:396600:4029614029614042771317Yersinia pestis D182038 chromosome, complete genomehypothetical protein0910
NC_017168:687471:6993896993897007051317Yersinia pestis A1122 chromosome, complete genomehypothetical protein0910
NC_011601:4856717:4872198487219848735081311Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeMcrC family protein, McrBC 5-methylcytosine restriction system component0651
NC_016902:4199133:4217135421713542184781344Escherichia coli KO11FL chromosome, complete genome5-methylcytosine restriction system component-like protein1e-83310
CP002516:4199133:4217135421713542184781344Escherichia coli KO11, complete genome5-methylcytosine restriction system component-like protein1e-83310
CP002185:4791811:4794392479439247957351344Escherichia coli W, complete genomeputative 5-methylcytosine restriction system component1e-83310
CP002797:4411763:4437071443707144383571287Escherichia coli NA114, complete genomeHypothetical protein7e-83308
NC_012779:996879:1008284100828410096841401Edwardsiella ictaluri 93-146, complete genomehypothetical protein8e-82304
NC_016002:1048420:1066963106696310683631401Pseudogulbenkiania sp. NH8B, complete genome5-methylcytosine-specific restriction protein McrC1e-73277
NC_008313:1:1716017160185121353Ralstonia eutropha H16 chromosome 1, complete sequence5-Methylcytosine-specific restriction enzyme C2e-73276
NC_011750:4978000:4979731497973149807471017Escherichia coli IAI39 chromosome, complete genomeputative restriction system component1e-63244
NC_017986:1885613:1924013192401319253231311Pseudomonas putida ND6 chromosome, complete genomeMcrBC 5-methylcytosine restriction system component-like protein7e-52205
NC_009512:5166459:5178049517804951793591311Pseudomonas putida F1, complete genomeMcrBC 5-methylcytosine restriction system component-like protein7e-52205
NC_009665:2352528:2360142236014223614281287Shewanella baltica OS185 chromosome, complete genomehypothetical protein1e-51204
NC_007005:4411388:4432524443252444337801257Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein1e-51204
NC_015458:2338437:2359991235999123612681278Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein3e-51202
NC_015581:1731120:1733487173348717347731287Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome5-methylcytosine restriction system component-like protein8e-51201
NC_010943:493002:5082845082845096301347Stenotrophomonas maltophilia K279a, complete genomehypothetical protein1e-49197
NC_011992:1968258:1983851198385119851461296Acidovorax ebreus TPSY, complete genomehypothetical protein1e-48194
NC_007509:1043602:1053010105301010543471338Burkholderia sp. 383 chromosome 3, complete sequenceMcrBC 5-methylcytosine restriction system component-like7e-48191
NC_009800:4529504:453749245374924538295804Escherichia coli HS, complete genomehypothetical protein3e-47189
NC_015740:3631326:3644307364430736456051299Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeMcrBC 5-methylcytosine restriction system component-like protein2e-44180
NC_015663:2090442:2105681210568121070031323Enterobacter aerogenes KCTC 2190 chromosome, complete genomeMcrBC 5-methylcytosine restriction system component3e-43176
NC_017047:4298207:4303372430337243046461275Rahnella aquatilis HX2 chromosome, complete genome5-methylcytosine restriction system component-like protein3e-42172
NC_015061:4203767:4209431420943142107051275Rahnella sp. Y9602 chromosome, complete genome5-methylcytosine restriction system component-like protein3e-42172
NC_002163:129800:1426331426331439641332Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomehypothetical protein5e-41169
NC_020181:3328844:3354878335487833560891212Enterobacter aerogenes EA1509E, complete genomeMcrBC 5-methylcytosine restriction system component8e-41168
NC_020207:1346579:1382203138220313835101308Enterococcus faecium NRRL B-2354, complete genomehypothetical protein9e-41168
NC_016816:3974895:3988568398856839897821215Pantoea ananatis LMG 5342, complete genomeMcrBC 5-methylcytosine restriction subunit McrC3e-34146
NC_015167:3469968:3473631347363134748811251Cellulophaga lytica DSM 7489 chromosome, complete genome5-methylcytosine restriction system component-like protein6e-27122
NC_015508:296856:3194243194243207221299Agrobacterium sp. H13-3 chromosome linear, complete sequencehypothetical protein2e-26120
NC_018721:943801:9566189566189578591242Psychroflexus torquis ATCC 700755 chromosome, complete genome5-methylcytosine restriction component McrC9e-26118
NC_011757:3486283:3491716349171634929961281Methylobacterium chloromethanicum CM4, complete genomeIQ calmodulin-binding- domain protein2e-24113
NC_020388:1479568:1537736153773615389381203Natronomonas moolapensis 8.8.11 complete genomehomolog to 5-methylcytosine restriction system protein McrC1e-1791.7
NC_013595:2592590:2596599259659925978941296Streptosporangium roseum DSM 43021, complete genomeMcrBC 5-methylcytosine restriction system component-like protein2e-1790.9
NC_016940:271500:2924922924922937181227Saprospira grandis str. Lewin chromosome, complete genome5-methylcytosine restriction system component-like protein2e-1687.4
NC_015588:1213873:1229261122926112304631203Isoptericola variabilis 225 chromosome, complete genome5-methylcytosine restriction system component-like protein6e-1685.9
NC_013158:1686239:1696248169624816975131266Halorhabdus utahensis DSM 12940, complete genomeMcrBC 5-methylcytosine restriction system component-like protein1e-1378.2
NC_015680:1315040:1325742132574213271481407Pyrococcus yayanosii CH1 chromosome, complete genome5-methylcytosine restriction system component2e-1377.4
NC_014391:1967167:1973784197378419750431260Micromonospora aurantiaca ATCC 27029 chromosome, complete genome5-methylcytosine restriction system component-like protein2e-1377.4
NC_010617:774914:8125598125598136051047Kocuria rhizophila DC2201, complete genomeputative McrC protein3e-1170.1
NC_013929:7278414:7304451730445173056471197Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein3e-1170.1
NC_014830:13179:400454004541025981Intrasporangium calvum DSM 43043 chromosome, complete genome5-methylcytosine restriction system component-like protein1e-1068.2
NC_015562:1413264:1419372141937214205951224Methanotorris igneus Kol 5 chromosome, complete genome5-methylcytosine restriction system component-like protein1e-1068.2
NC_013131:8029621:8047406804740680486231218Catenulispora acidiphila DSM 44928, complete genomehypothetical protein1e-0964.7
NC_009338:3359500:3383531338353133848711341Mycobacterium gilvum PYR-GCK chromosome, complete genomeMcrBC 5-methylcytosine restriction system component-like protein3e-0963.2
NC_016023:1959255:1975478197547819765481071Bacillus coagulans 36D1 chromosome, complete genome5-methylcytosine restriction system component-like protein5e-0962.8
NC_020126:7661551:7676714767671476779011188Myxococcus stipitatus DSM 14675, complete genome5-methylcytosine restriction system component-like protein5e-0962.8
NC_014151:3663295:3672286367228636734821197Cellulomonas flavigena DSM 20109 chromosome, complete genome5-methylcytosine restriction system component- like protein1e-0861.6
NC_006624:873525:8842668842668856691404Thermococcus kodakarensis KOD1, complete genomeputative 5-methylcytosine restriction system, catalytic subunit1e-0861.2
NC_013595:8603188:8617733861773386189531221Streptosporangium roseum DSM 43021, complete genomeMcrBC 5-methylcytosine restriction system component-like protein2e-0654.3
NC_015873:2197412:2204921220492122059941074Megasphaera elsdenii DSM 20460, complete genomeMcrBC 5-methylcytosine restriction system component6e-0652.8