Pre_GI: BLASTP Hits

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Query: NC_008150:4373722:4378514 Yersinia pestis Antiqua, complete genome

Start: 4378514, End: 4379926, Length: 1413

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from the Republic of Congo. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009381:3680638:3685452368545236868641413Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein0924
NC_008149:318860:3313473313473327591413Yersinia pestis Nepal516, complete genomehypothetical protein0924
NC_003143:398748:4121394121394135511413Yersinia pestis CO92, complete genomehypothetical protein0924
NC_004088:4202247:4207039420703942084271389Yersinia pestis KIM, complete genomehypothetical protein0909
NC_005810:4306716:4311508431150843128961389Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein0909
NC_014029:452248:4656634656634670511389Yersinia pestis Z176003 chromosome, complete genomehypothetical protein0909
NC_017154:394401:4078154078154092031389Yersinia pestis D106004 chromosome, complete genomehypothetical protein0909
NC_017160:396600:4100154100154114031389Yersinia pestis D182038 chromosome, complete genomehypothetical protein0909
NC_017168:687471:6922636922636936511389Yersinia pestis A1122 chromosome, complete genomehypothetical protein0909
NC_017265:4065625:4070417407041740718051389Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein0909
NC_012560:5019900:5046214504621450491532940Azotobacter vinelandii DJ, complete genomehypothetical protein1e-173609
NC_021150:5019887:5046201504620150491402940Azotobacter vinelandii CA6, complete genomehypothetical protein1e-173609
NC_008463:282565:2941012941012972383138Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein6e-172603
NC_002947:4167500:4213727421372742149471221Pseudomonas putida KT2440, complete genomehypothetical protein2e-128459
NC_014500:3097362:3114311311431131177333423Dickeya dadantii 3937 chromosome, complete genomehypothetical protein2e-37157
NC_013172:2934572:2934572293457229379583387Brachybacterium faecium DSM 4810, complete genomehypothetical protein3e-24113
NC_015172:775128:7892327892327926363405Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeputative cytoplasmic protein6e-2099
NC_007498:2087811:2116921211692121202863366Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein7e-1995.5
NC_007759:1666967:1684519168451916879413423Syntrophus aciditrophicus SB, complete genomehypothetical cytosolic protein2e-1894.4
NC_013204:74855:8016780167835773411Eggerthella lenta DSM 2243, complete genomeputative ATP-binding protein2e-1894
NC_010545:1475410:1498298149829815016483351Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein4e-1583.2
NC_003919:5056650:5081284508128450853064023Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein2e-1480.5
NC_018581:2768743:2771174277117427745183345Gordonia sp. KTR9 chromosome, complete genomehypothetical protein3e-1480.1
NC_012590:1950154:1952296195229619556883393Corynebacterium aurimucosum ATCC 700975, complete genomehypothetical protein4e-1273.2
NC_015514:1923428:1942657194265719460133357Cellulomonas fimi ATCC 484 chromosome, complete genomehypothetical protein2e-0860.8
NC_015671:2011462:2030050203005020334273378Cellvibrio gilvus ATCC 13127 chromosome, complete genomehypothetical protein4e-0859.7
NC_021184:3793285:3829248382924838325893342Desulfotomaculum gibsoniae DSM 7213, complete genomehypothetical protein9e-0652