Pre_GI: BLASTP Hits

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Query: NC_008150:4373722:4374964 Yersinia pestis Antiqua, complete genome

Start: 4374964, End: 4376160, Length: 1197

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from the Republic of Congo. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:4065625:4066867406686740680631197Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,thymidylate kinase0672
NC_004088:4202247:4203489420348942046851197Yersinia pestis KIM, complete genomehypothetical protein0672
NC_008149:318860:3351133351133363091197Yersinia pestis Nepal516, complete genomemembrane protein0672
NC_003143:398748:4159054159054171011197Yersinia pestis CO92, complete genomehypothetical protein0672
NC_009381:3680638:3681902368190236830981197Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein0672
NC_014029:452248:4694054694054706011197Yersinia pestis Z176003 chromosome, complete genomehypothetical protein0672
NC_017154:394401:4115574115574127531197Yersinia pestis D106004 chromosome, complete genomehypothetical protein0672
NC_017160:396600:4137574137574149531197Yersinia pestis D182038 chromosome, complete genomehypothetical protein0672
NC_017168:687471:6887136887136899091197Yersinia pestis A1122 chromosome, complete genomehypothetical protein0672
NC_005810:4306716:4307958430795843091541197Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein0669
NC_015061:4203767:4232270423227042334601191Rahnella sp. Y9602 chromosome, complete genomehypothetical protein4e-113408
NC_017047:4298207:4326185432618543273751191Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein4e-113408
NC_014311:2831620:2847093284709328481691077Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein6e-31135
NC_009943:1364536:1365638136563813669061269Candidatus Desulfococcus oleovorans Hxd3, complete genomeprotein of unknown function DUF898 transmembrane8e-30131
NC_009675:3067567:3085829308582930870221194Anaeromyxobacter sp. Fw109-5 chromosome, complete genomehypothetical protein3e-25116
NC_011979:646518:6500336500336513311299Geobacter sp. FRC-32, complete genomeprotein of unknown function DUF898 transmembrane2e-24113
NC_014307:2735934:2739762273976227408591098Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein2e-22106
NC_011146:603429:6204976204976217231227Geobacter bemidjiensis Bem, complete genomeprotein of unknown function DUF898 transmembrane9e-22104
NC_011891:4104000:4104261410426141054481188Anaeromyxobacter dehalogenans 2CP-1, complete genomeprotein of unknown function DUF898 transmembrane3e-21102
NC_017162:1228723:1228723122872312298111089Acinetobacter baumannii 1656-2 chromosome, complete genomehypothetical protein4e-21102
NC_012967:4449576:4462763446276344639591197Escherichia coli B str. REL606 chromosome, complete genomeinner membrane protein5e-21102
NC_012947:3947238:3950149395014939513451197Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein5e-21102
NC_011742:4795733:4808951480895148101471197Escherichia coli S88 chromosome, complete genomehypothetical protein6e-21102
NC_010498:4821519:4834680483468048359031224Escherichia coli SMS-3-5, complete genomehypothetical protein3e-20100
NC_000913:4462782:4477753447775344789491197Escherichia coli K12, complete genomeconserved inner membrane protein1e-1998.2
NC_010473:4564590:4579561457956145807571197Escherichia coli str. K-12 substr. DH10B, complete genomeconserved inner membrane protein1e-1998.2
AC_000091:4472000:4484410448441044856061197Escherichia coli W3110 DNA, complete genomeconserved inner membrane protein1e-1998.2
NC_007760:4055860:4061651406165140628441194Anaeromyxobacter dehalogenans 2CP-C, complete genomeprotein of unknown function DUF8981e-1998.2
NC_015138:765497:7865647865647878051242Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehypothetical protein2e-1170.5
NC_010658:4494103:4497457449745744994301974Shigella boydii CDC 3083-94, complete genome6e-1065.5
NC_007613:4217557:424482042448204245065246Shigella boydii Sb227, complete genomehypothetical protein2e-0963.5
NC_007613:4217557:4240173424017342411921020Shigella boydii Sb227, complete genomehypothetical protein3e-0756.6
NC_014118:2316000:2319152231915223202551104Burkholderia sp. CCGE1002 chromosome chromosome 2, completeprotein of unknown function DUF898 transmembrane6e-0755.5