Pre_GI: BLASTP Hits

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Query: NC_008150:2599661:2601591 Yersinia pestis Antiqua, complete genome

Start: 2601591, End: 2602787, Length: 1197

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from the Republic of Congo. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:2560000:2563190256319025643861197Yersinia pestis A1122 chromosome, complete genomeribosomal RNA large subunit methyltransferase N0831
NC_017154:2901300:2903231290323129044271197Yersinia pestis D106004 chromosome, complete genomehypothetical protein0831
NC_010159:409500:4367154367154379111197Yersinia pestis Angola, complete genomeradical SAM domain protein, Cfr family0831
NC_010634:3269010:3277182327718232783781197Yersinia pseudotuberculosis PB1/+, complete genomeradical SAM protein0828
NC_011601:2854178:2878552287855228797061155Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeribosomal RNA large subunit methyltransferase N0692
NC_004344:622318:6399146399146410621149Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein2e-126452
NC_014909:589677:6077706077706088491080Candidatus Blochmannia vafer str. BVAF chromosome, complete genomeRibosomal RNA large subunit methyltransferase N3e-112405
NC_016893:181951:1906981906981917891092Wigglesworthia glossinidia endosymbiont of Glossina morsitans23S rRNA methyltransferase3e-110398
NC_015222:1127675:1134677113467711357771101Nitrosomonas sp. AL212 chromosome, complete genomeribosomal RNA large subunit methyltransferase N2e-108392
NC_008781:1973826:1992803199280319939511149Polaromonas naphthalenivorans CJ2, complete genomeradical SAM enzyme, Cfr family2e-100366
NC_014109:326500:3271233271233281931071Candidatus Riesia pediculicola USDA chromosome, complete genomeradical SAM enzyme, Cfr family2e-95349
NC_015580:3252534:3257192325719232584601269Novosphingobium sp. PP1Y, complete genomehypothetical protein3e-84312
NC_015703:2104058:2107929210792921089901062Runella slithyformis DSM 19594 chromosome, complete genomeribosomal RNA large subunit methyltransferase N3e-68259
NC_015144:2053969:2057240205724020582861047Weeksella virosa DSM 16922 chromosome, complete genomeribosomal RNA large subunit methyltransferase N1e-66254
NC_014212:319815:3365413365413375751035Meiothermus silvanus DSM 9946 chromosome, complete genomeradical SAM enzyme, Cfr family2e-66253
NC_014738:469945:4899734899734910101038Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,23S rRNA m(2)a-2503 methyltransferase5e-66251
NC_020125:1237536:1237536123753612385731038Riemerella anatipestifer RA-CH-2, complete genomeputative Fe-S-cluster redox enzyme5e-66251
NC_015387:2072237:2086715208671520877761062Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeRibosomal RNA large subunit methyltransferase N5e-66251
NC_011883:519308:5378525378525390121161Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,radical SAM enzyme, Cfr family7e-66251
NC_009012:686740:6995326995327005811050Clostridium thermocellum ATCC 27405, complete genomeradical SAM enzyme, Cfr family2e-64246
NC_002570:2616899:2624511262451126255991089Bacillus halodurans C-125, complete genomehypothetical protein5e-64245
NC_013894:672840:7030197030197040621044Thermocrinis albus DSM 14484 chromosome, complete genomeradical SAM enzyme, Cfr family2e-63243
NC_005042:1480761:1488769148876914898151047Prochlorococcus marinus subsp. marinus str. CCMP1375, completePredicted Fe-S-cluster redox enzyme5e-63241
NC_013939:913890:9469109469109479921083Deferribacter desulfuricans SSM1, complete genomehypothetical protein1e-62240
NC_004663:5741436:5765919576591957669561038Bacteroides thetaiotaomicron VPI-5482, complete genomehypothetical protein3e-62239
NC_008025:669281:6834006834006844341035Deinococcus geothermalis DSM 11300, complete genomehypothetical protein1e-61236
NC_002163:1607360:1625100162510016261701071Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomehypothetical protein2e-61236
NC_009707:1811650:1829229182922918302991071Campylobacter jejuni subsp. doylei 269.97 chromosome, completeribosomal RNA large subunit methyltransferase N5e-61235
NC_003912:1742370:1760947176094717620171071Campylobacter jejuni RM1221, complete genomeradical SAM enzyme, Cfr family1e-60234
NC_017281:1645903:1664480166448016655501071Campylobacter jejuni subsp. jejuni S3 chromosome, complete genomeribosomal RNA large subunit methyltransferase N1e-60234
NC_014802:1631483:1649089164908916501591071Campylobacter jejuni subsp. jejuni ICDCCJ07001 chromosome, completeradical SAM enzyme, Cfr family9e-61234
NC_017279:1603916:1622494162249416235641071Campylobacter jejuni subsp. jejuni IA3902 chromosome, completeputative radical SAM domain protein7e-61234
NC_008787:1582110:1599705159970516007751071Campylobacter jejuni subsp. jejuni 81-176, complete genomeradical SAM enzyme, Cfr family2e-60233
NC_017280:1584961:1601753160175316028231071Campylobacter jejuni subsp. jejuni M1 chromosome, complete genomeribosomal RNA large subunit methyltransferase N2e-60233
NC_013165:3146000:3155339315533931563731035Slackia heliotrinireducens DSM 20476, complete genomeradical SAM enzyme, Cfr family1e-59231
NC_020134:2237421:2242411224241122434571047Clostridium stercorarium subsp. stercorarium DSM 8532, completeribosomal RNA large subunit methyltransferase N1e-59230
NC_014657:944000:9469759469759480091035Caldicellulosiruptor owensensis OL chromosome, complete genomeradical sam enzyme, cfr family1e-59230
NC_003888:6103534:6143019614301961441251107Streptomyces coelicolor A3(2), complete genomehypothetical protein4e-59228
NC_008819:1531187:1539004153900415400831080Prochlorococcus marinus str. NATL1A, complete genomePredicted Fe-S-cluster redox enzyme2e-58226
NC_014734:1757995:1771274177127417723111038Paludibacter propionicigenes WB4 chromosome, complete genome23S rRNA m(2)a-2503 methyltransferase5e-58225
NC_007335:944175:9519929519929530711080Prochlorococcus marinus str. NATL2A, complete genomeConserved hypothetical protein 486e-58225
NC_014314:1:1628716287173571071Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeCfr family radical SAM protein6e-58224
NC_016790:1480441:1482439148243914835451107Corynebacterium diphtheriae VA01 chromosome, complete genomehypothetical protein3e-57222
NC_016788:1509943:1509943150994315110491107Corynebacterium diphtheriae HC04 chromosome, complete genomehypothetical protein3e-57222
NC_009380:1491428:1491428149142814924891062Salinispora tropica CNB-440 chromosome, complete genomeribosomal RNA large subunit methyltransferase N8e-57221
NC_012483:30784:8033480334815241191Acidobacterium capsulatum ATCC 51196, complete genomeradical SAM enzyme, Cfr family2e-55216
NC_014248:943198:9601379601379612071071Nostoc azollae 0708 chromosome, complete genomeradical SAM enzyme, Cfr family7e-55214
NC_010617:665830:6890916890916902391149Kocuria rhizophila DC2201, complete genomehypothetical protein6e-55214
NC_013204:3613824:3624368362436836254291062Eggerthella lenta DSM 2243, complete genomeradical SAM enzyme, Cfr family2e-54213
NC_013791:1507943:1519437151943715205191083Bacillus pseudofirmus OF4 chromosome, complete genomeribosomal RNA large subunit methyltransferase N3e-54212
NC_004193:3215500:3221125322112532221921068Oceanobacillus iheyensis HTE831, complete genomehypothetical protein3e-54212
NC_009840:1485383:1492191149219114932371047Prochlorococcus marinus str. MIT 9215, complete genomePredicted Fe-S-cluster redox enzyme3e-53209
NC_020133:2144752:2160305216030521613991095Mycobacterium liflandii 128FXT, complete genomeribosomal RNA large subunit methyltransferase N2e-53209
NC_010612:2215724:2229847222984722309411095Mycobacterium marinum M, complete genomehypothetical protein2e-53209
NC_015873:1901939:1924994192499419260221029Megasphaera elsdenii DSM 20460, complete genomeribosomal RNA large subunit methyltransferase N1e-52207
NC_016584:4905310:4924702492470249257661065Desulfosporosinus orientis DSM 765 chromosome, complete genome2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD2e-52206
NC_002973:505978:5261655261655272681104Listeria monocytogenes str. 4b F2365, complete genomeconserved hypothetical protein TIGR000482e-52206
NC_014363:2035141:2069206931481080Olsenella uli DSM 7084 chromosome, complete genome23S rRNA m(2)A-2503 methyltransferase5e-52205
NC_009091:1392469:1398613139861313996561044Prochlorococcus marinus str. MIT 9301, complete genomePredicted Fe-S-cluster redox enzyme9e-52204
NC_007577:1458657:1464783146478314658291047Prochlorococcus marinus str. MIT 9312, complete genomehypothetical protein2e-51203
NC_017371:1470582:1471568147156814726411074Helicobacter pylori Gambia94/24 chromosome, complete genomeribosomal RNA large subunit methyltransferase N3e-51202
NC_005072:1405884:1412664141266414137101047Prochlorococcus marinus subsp. pastoris str. CCMP1986, completehypothetical protein1e-50201
NC_008817:1443983:1450094145009414511401047Prochlorococcus marinus str. MIT 9515, complete genomePredicted Fe-S-cluster redox enzyme8e-51201
NC_008816:1416711:1422837142283714238831047Prochlorococcus marinus str. AS9601, complete genomePredicted Fe-S-cluster redox enzyme2e-50200
NC_015389:2101841:2109286210928621103321047Coriobacterium glomerans PW2 chromosome, complete genome23S rRNA m(2)A-2503 methyltransferase5e-48192
NC_006582:1138987:1162418116241811634701053Bacillus clausii KSM-K16, complete genomeflorfenicol/chloramphenicol resistance protein2e-41170
UCMB5137:2894511:2904035290403529050901056Bacillus atrophaeus UCMB-5137chloramphenicol/florfenicol resistance protein2e-40167
NC_013406:3926531:3931127393112739321671041Paenibacillus sp. Y412MC10 chromosome, complete genomechloramphenicol/florfenicol resistance protein3e-40166
NC_013316:2033906:207236520723652073348984Clostridium difficile R20291, complete genomehypothetical protein3e-39162
NC_016002:1975000:1979894197989419809581065Pseudogulbenkiania sp. NH8B, complete genomeradical SAM domain containing protein6e-39162
NC_015385:2050648:207654120765412077530990Treponema succinifaciens DSM 2489 chromosome, complete genomeradical SAM enzyme, Cfr family3e-37156
NC_019892:8124070:8127585812758581287031119Singulisphaera acidiphila DSM 18658 chromosome, complete genomeFe-S-cluster redox protein1e-33144
NC_009725:496443:5437995437995448481050Bacillus amyloliquefaciens FZB42, complete genomeflorfenicol/chloramphenicol resistance like protein5e-32139
NC_020410:495184:5263905263905274391050Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeRibosomal RNA large subunit methyltransferase Cfr1e-31137
NC_014394:707305:7085437085437095531011Gallionella capsiferriformans ES-2 chromosome, complete genomeradical SAM domain-containing protein2e-31137
NC_015711:5163000:516324151632415164143903Myxococcus fulvus HW-1 chromosome, complete genomeribosomal RNA large subunit methyltransferase N2e-31137
NC_014329:1407880:142778814277881428399612Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein2e-31137
NC_014640:3808639:3819868381986838209231056Achromobacter xylosoxidans A8 chromosome, complete genomemethyltransferase2e-31137
NC_019842:484933:5355615355615366101050Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,chloramphenicol/florfenicol resistance protein2e-31136
NC_020272:3396800:3402972340297234040211050Bacillus amyloliquefaciens IT-45, complete genomechloramphenicol/florfenicol resistance protein1e-30134
NC_014329:1407880:142833814283381428979642Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein1e-1894.7
NC_013171:896802:907669907669908637969Anaerococcus prevotii DSM 20548, complete genomeFe-S-cluster redox enzyme-like protein2e-0653.9