Pre_GI: BLASTP Hits

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Query: NC_008150:1384102:1398705 Yersinia pestis Antiqua, complete genome

Start: 1398705, End: 1399262, Length: 558

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from the Republic of Congo. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008149:2517538:253577225357722536329558Yersinia pestis Nepal516, complete genomehypothetical protein4e-105380
NC_005810:1663672:167309716730971673675579Yersinia pestis biovar Microtus str. 91001, complete genomeintegrase4e-105380
NC_009381:1414985:142000214200021420559558Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-104378
NC_009708:2537557:2555953255595325569691017Yersinia pseudotuberculosis IP 31758 chromosome, complete genomephage integrase family site specific recombinase7e-99359
NC_003143:2101902:211562621156262116141516Yersinia pestis CO92, complete genomehypothetical protein3e-96350
NC_017168:3535786:354487235448723545387516Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-96350
NC_017265:2306500:232086923208692321384516Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Integrase3e-96350
CP002797:4812799:4826760482676048278061047Escherichia coli NA114, complete genomePutative integrase5e-74276
NC_007712:1954808:1974024197402419750401017Sodalis glossinidius str. 'morsitans', complete genomephage integrase3e-70264
NC_006155:2116834:2128303212830321293251023Yersinia pseudotuberculosis IP 32953, complete genomeputative integrase6e-67253
NC_012779:2127542:2148941214894121499511011Edwardsiella ictaluri 93-146, complete genomesite-specific recombinase, phage integrase family3e-65247
NC_016816:2953530:2977372297737229783941023Pantoea ananatis LMG 5342, complete genomesite-specific recombinase, phage integrase family6e-65246
NC_007712:2028500:2057823205782320588451023Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase2e-50197
NC_007712:1926500:193080019308001931645846Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase1e-48192
NC_007712:1712667:171266717126671713602936Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase8e-47186
NC_011205:2180598:218594621859462186935990Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853integrase protein7e-46183
NC_011294:2053991:205795920579592058948990Salmonella enterica subsp. enterica serovar Enteritidis strphage integrase7e-46183
NC_020181:2097066:2117522211752221185741053Enterobacter aerogenes EA1509E, complete genomePutative integrase1e-43175
NC_015942:403296:4159944159944170011008Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase family protein2e-31134
NC_011770:860944:8639658639658650141050Pseudomonas aeruginosa LESB58, complete genomeIntegrase1e-1789.4
NC_008027:2331617:2337757233775723388061050Pseudomonas entomophila L48, complete genomesite-specific recombinase, integrase family6e-1683.6
NC_017033:1052000:1053148105314810541671020Frateuria aurantia DSM 6220 chromosome, complete genomesite-specific recombinase XerC2e-1582
NC_017986:4931104:4946514494651449475211008Pseudomonas putida ND6 chromosome, complete genomephage integrase2e-1581.6
NC_007005:3414579:3419554341955434205881035Pseudomonas syringae pv. syringae B728a, complete genomePhage integrase:Phage integrase, N-terminal SAM-like6e-1580.5
NC_012724:359444:3687393687393697581020Burkholderia glumae BGR1 chromosome 1, complete genomePhage-related integrase8e-1476.6
NC_012660:3689223:370301937030193703990972Pseudomonas fluorescens SBW25 chromosome, complete genomeintegrase (pseudogene)5e-1373.9
NC_017986:4885979:4888798488879848898621065Pseudomonas putida ND6 chromosome, complete genomeintegrase7e-1373.6
NC_011770:2690501:2690501269050126915261026Pseudomonas aeruginosa LESB58, complete genomesite-specific recombinase, phage integrase family8e-1373.2
NC_002947:4484824:449569044956904496649960Pseudomonas putida KT2440, complete genomesite-specific recombinase, phage integrase family1e-1273.2
NC_010511:4313769:4325412432541243264611050Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein1e-1272.4
NC_012724:359444:3783543783543793821029Burkholderia glumae BGR1 chromosome 1, complete genomePhage integrase:Phage integrase, N-terminal SAM-like protein2e-1065.1
NC_014722:846084:8501788501788513681191Burkholderia rhizoxinica HKI 454, complete genomehypothetical protein7e-1063.5
NC_009654:615504:6208096208096219241116Marinomonas sp. MWYL1, complete genomehypothetical protein3e-0961.6
NC_014837:1570500:157833915783391578668330Pantoea sp. At-9b chromosome, complete genome9e-0959.7
NC_014972:480355:4934964934964946591164Desulfobulbus propionicus DSM 2032 chromosome, complete genomeintegrase family protein5e-0857.4
NC_010002:5143869:5157818515781851588461029Delftia acidovorans SPH-1, complete genomeintegrase family protein5e-0857.4
NC_007494:714525:7351117351117362321122Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceputative integrase9e-0856.6
NC_011770:2499432:2540392254039225415041113Pseudomonas aeruginosa LESB58, complete genomephage integrase, putative4e-0754.7
NC_009656:2663387:266807926680792668627549Pseudomonas aeruginosa PA7 chromosome, complete genomephage integrase family protein4e-0651.2
NC_009952:366959:3847653847653859581194Dinoroseobacter shibae DFL 12, complete genomephage integrase family protein5e-0650.8