Pre_GI: BLASTP Hits

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Query: NC_008149:650706:671817 Yersinia pestis Nepal516, complete genome

Start: 671817, End: 672896, Length: 1080

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from Nepal. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:3724500:3724533372453337256121080Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,periplasmic binding protein0699
NC_017168:341233:3412333412333423121080Yersinia pestis A1122 chromosome, complete genomeiron-enterobactin transporter periplasmic binding protein0699
NC_017160:737000:7588767588767599551080Yersinia pestis D182038 chromosome, complete genomeferric enterobactin (enterochelin) binding protein0699
NC_014029:792719:8145358145358156141080Yersinia pestis Z176003 chromosome, complete genomeferric enterobactin (enterochelin) binding protein0699
NC_009381:522731:5438405438405449191080Yersinia pestis Pestoides F chromosome, complete genomeiron-enterobactin transporter periplasmic binding protein0699
NC_010159:259695:2596952596952607741080Yersinia pestis Angola, complete genomeferrienterobactin-binding periplasmic protein0699
NC_004088:3859173:3859173385917338602521080Yersinia pestis KIM, complete genomeferric enterobactin (enterochelin) binding protein0699
NC_005810:3333000:3354219335421933552981080Yersinia pestis biovar Microtus str. 91001, complete genomeiron-enterobactin transporter periplasmic binding protein0699
NC_008150:3430000:3430055343005534311341080Yersinia pestis Antiqua, complete genomeperiplasmic binding protein0699
NC_010465:733916:7604907604907615691080Yersinia pseudotuberculosis YPIII, complete genomeperiplasmic binding protein0697
NC_003143:741169:7629907629907640031014Yersinia pestis CO92, complete genomeperiplasmic binding protein0674
NC_012880:1765920:1779147177914717802021056Dickeya dadantii Ech703, complete genomeperiplasmic binding protein7e-91334
NC_015061:596247:600390600390601358969Rahnella sp. Y9602 chromosome, complete genomeperiplasmic binding protein8e-91333
NC_014550:301894:3102743102743112961023Arthrobacter arilaitensis Re117, complete genomeiron-siderophore ABC transporter substrate-binding protein2e-50200
NC_014625:1187608:120943112094311210372942Ketogulonicigenium vulgare Y25 chromosome, complete genomeiron-enterobactin transporter periplasmic binding protein2e-45182
NC_010002:3465509:3467197346719734682851089Delftia acidovorans SPH-1, complete genomeperiplasmic binding protein7e-41168
NC_015563:4024450:4044307404430740453501044Delftia sp. Cs1-4 chromosome, complete genomeABC transporter periplasmic protein8e-41167
NC_004193:375416:477647477647478612966Oceanobacillus iheyensis HTE831, complete genomeferrichrome ABC transporter ferrichrome-binding protein2e-1170.1
NC_014622:3955851:3980635398063539816751041Paenibacillus polymyxa SC2 chromosome, complete genomeiron(III) dicitrate ABC transporter permease2e-1067
NC_016641:2618587:264155326415532642545993Paenibacillus terrae HPL-003 chromosome, complete genomesiderophore iron ABC transporter substrate-binding protein4e-1066.2
NC_017160:4508000:451075445107544511707954Yersinia pestis D182038 chromosome, complete genomeputative iron transport protein2e-0963.9
NC_010465:62348:795577955780510954Yersinia pseudotuberculosis YPIII, complete genomeperiplasmic binding protein2e-0963.9
NC_017277:15937:167401674017687948Synechocystis sp. PCC 6803, complete genomeiron(III) dicitrate transport system permeaseprotein2e-0963.5
NC_017052:15937:167401674017687948Synechocystis sp. PCC 6803 substr. PCC-N, complete genomeiron(III) dicitrate transport system permeaseprotein2e-0963.5
NC_017039:15937:167401674017687948Synechocystis sp. PCC 6803 substr. PCC-P, complete genomeiron(III) dicitrate transport system permeaseprotein2e-0963.5
NC_000911:15937:167401674017687948Synechocystis sp. PCC 6803, complete genomeiron(III) dicitrate transport system permease protein; FecB2e-0963.5
NC_006958:3240019:3257704325770432587321029Corynebacterium glutamicum ATCC 13032, complete genomeABC-type cobalamin/Fe3+-siderophores transport system, secreted component3e-0963.2
NC_003450:3266604:3284397328439732854251029Corynebacterium glutamicum ATCC 13032, complete genomeABC-type transport systems, periplasmic component3e-0963.2
NC_016641:5671186:569648056964805697478999Paenibacillus terrae HPL-003 chromosome, complete genomeiron iii dicitrate transport protein3e-0962.8
NC_016612:3843358:386816338681633869065903Klebsiella oxytoca KCTC 1686 chromosome, complete genomeiron-dicitrate transporter substrate-binding subunit4e-0859.7
NC_007907:321537:3358173358173368271011Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-0859.3
NC_008262:904000:920802920802921746945Clostridium perfringens SM101, complete genomePeriplasmic binding protein family4e-0755.8
NC_017200:4240500:424055542405554241499945Bacillus thuringiensis serovar finitimus YBT-020 chromosome,iron compound ABC transporter substrate-binding protein7e-0755.5
NC_003366:981105:994044994044994988945Clostridium perfringens str. 13, complete genomeprobable iron(III) dicitrate ABC transporter1e-0654.3
NC_019897:3669888:3669888366988836709221035Thermobacillus composti KWC4 chromosome, complete genomeFe3+-hydroxamate ABC transporter substrate-binding protein2e-0653.5
NC_014228:3591758:360334936033493604248900Xenorhabdus nematophila ATCC 19061, complete genomeIron(III) dicitrate-binding periplasmic protein precursor FecB8e-0652