Pre_GI: BLASTP Hits

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Query: NC_008149:3790897:3804839 Yersinia pestis Nepal516, complete genome

Start: 3804839, End: 3806467, Length: 1629

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from Nepal. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009381:4169353:4183271418327141848991629Yersinia pestis Pestoides F chromosome, complete genomerhamnulokinase01120
NC_009708:4215500:4229953422995342315151563Yersinia pseudotuberculosis IP 31758 chromosome, complete genomerhamnulokinase01075
NC_005810:515744:5201725201725216291458Yersinia pestis biovar Microtus str. 91001, complete genomerhamnulokinase01003
NC_006155:456000:4607474607474622041458Yersinia pseudotuberculosis IP 32953, complete genomerhamnulokinase01003
NC_014029:331919:3355523355523370091458Yersinia pestis Z176003 chromosome, complete genomerhamnulokinase01003
NC_017154:331921:3355553355553370121458Yersinia pestis D106004 chromosome, complete genomerhamnulokinase01003
NC_017168:751078:7651917651917666481458Yersinia pestis A1122 chromosome, complete genomerhamnulokinase01003
NC_017265:644384:6563276563276577841458Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,rhamnulokinase01003
NC_010159:741819:7544487544487559051458Yersinia pestis Angola, complete genomerhamnulokinase01001
NC_010465:4222586:4233958423395842353761419Yersinia pseudotuberculosis YPIII, complete genomerhamnulokinase0976
NC_020063:4653422:4654559465455946560281470Enterobacteriaceae bacterium strain FGI 57, complete genomerhamnulokinase2e-180632
NC_012912:4071859:4090549409054940920211473Dickeya zeae Ech1591, complete genomerhamnulokinase4e-168591
NC_014650:3438466:3448257344825734497291473Geobacillus sp. Y4.1MC1 chromosome, complete genomerhamnulokinase4e-107389
NC_015389:616430:6446646446646461391476Coriobacterium glomerans PW2 chromosome, complete genomerhamnulokinase3e-98359
NC_004193:375416:5259285259285273401413Oceanobacillus iheyensis HTE831, complete genomerhamnulokinase1e-95351
NC_014622:2477019:2486821248682124882961476Paenibacillus polymyxa SC2 chromosome, complete genomecarbohydrate kinase, fggy4e-95348
NC_014622:5553628:5568432556843255699131482Paenibacillus polymyxa SC2 chromosome, complete genomerhamnulokinase7e-94345
NC_013406:4478000:4493815449381544953261512Paenibacillus sp. Y412MC10 chromosome, complete genomecarbohydrate kinase, FGGY-like protein2e-91336
NC_000853:1071078:1088154108815410895841431Thermotoga maritima MSB8, complete genomesugar kinase2e-86320
NC_014650:2500817:2513129251312925146011473Geobacillus sp. Y4.1MC1 chromosome, complete genomecarbohydrate kinase, FGGY-like protein5e-86318
NC_011899:1021672:1037948103794810393781431Halothermothrix orenii H 168, complete genomeRhamnulokinase6e-85315
NC_013205:747502:7495567495567510281473Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,Carbohydrate kinase, FGGY-like protein2e-83310
NC_013501:777947:7979687979687994071440Rhodothermus marinus DSM 4252, complete genomecarbohydrate kinase FGGY5e-83308
NC_017167:674511:6765056765056779771473Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1Carbohydrate kinase, FGGY-like protein1e-82308
NC_016771:2933886:2943734294373429452271494Bacillus cereus NC7401, complete genomerhamnulokinase3e-80300
NC_011658:2978000:2987857298785729893501494Bacillus cereus AH187 chromosome, complete genomerhamnulokinase3e-80300
NC_015957:3342169:3345196334519633467881593Streptomyces violaceusniger Tu 4113 chromosome, complete genomecarbohydrate kinase, FGGY5e-80299
NC_018607:1463918:1481592148159214830011410Brachyspira pilosicoli B2904 chromosome, complete genomeFGGY-like carbohydrate kinase5e-70265
NC_019908:499929:5054215054215068301410Brachyspira pilosicoli P43/6/78 chromosome, complete genomecarbohydrate kinase FGGY5e-70265
NC_014330:139175:1509891509891524101422Brachyspira pilosicoli 95/1000 chromosome, complete genomecarbohydrate kinase FGGY2e-69264
NC_015514:3351052:3362906336290633643961491Cellulomonas fimi ATCC 484 chromosome, complete genomecarbohydrate kinase2e-67257
NC_017243:2079018:2080972208097220823811410Brachyspira intermedia PWS/A chromosome, complete genomeCarbohydrate kinase, FGGY-like protein9e-67254
NC_014150:2798000:2819691281969128211031413Brachyspira murdochii DSM 12563 chromosome, complete genomeCarbohydrate kinase, FGGY-like protein3e-66253
NC_010003:123297:1342861342861357431458Petrotoga mobilis SJ95, complete genomecarbohydrate kinase FGGY1e-65250
NC_017167:674511:6903706903706918361467Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1Carbohydrate kinase, FGGY1e-50201
NC_016614:1178000:1199062119906212005161455Vibrio sp. EJY3 chromosome 2, complete sequenceL-fuculokinase2e-27124
NC_008309:1628939:1636996163699616384531458Haemophilus somnus 129PT, complete genomeL-fuculokinase2e-23110
NC_010939:1920781:1941818194181819432511434Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeL-fuculokinase1e-22108
NC_009053:1895485:1915853191585319172861434Actinobacillus pleuropneumoniae L20, complete genomeL-fuculokinase5e-22106
NC_014538:187747:1918151918151933171503Thermoanaerobacter sp. X513 chromosome, complete genomexylulokinase3e-1583.6
NC_010320:143109:1519491519491534511503Thermoanaerobacter sp. X514 chromosome, complete genomexylulokinase3e-1583.6
NC_010610:1178430:1218379121837912198991521Lactobacillus fermentum IFO 3956, complete genomegluconate kinase9e-1582
NC_012034:2107546:2107546210754621090631518Anaerocellum thermophilum DSM 6725, complete genomecarbohydrate kinase FGGY1e-1482
NC_012581:1075663:1088090108809010896311542Bacillus anthracis str. CDC 684 chromosome, complete genomegluconate kinase3e-1377.4
NC_007644:2099878:2113215211321521147441530Moorella thermoacetica ATCC 39073, complete genomexylulokinase3e-1377
NC_000868:269923:2743072743072757911485Pyrococcus abyssi GE5, complete genomeglycerol kinase5e-1376.3
NC_008698:1556223:1567675156767515691741500Thermofilum pendens Hrk 5, complete genomecarbohydrate kinase, FGGY3e-1273.9
NC_004193:2522000:2532254253225425337561503Oceanobacillus iheyensis HTE831, complete genomeglycerol kinase8e-1272.4
NC_013893:511222:5112225112225127091488Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeXylulose kinase8e-1272.4
NC_017353:505935:5059355059355074221488Staphylococcus lugdunensis N920143, complete genomexylulose kinase8e-1272.4
NC_006624:1208464:1219136121913612206291494Thermococcus kodakarensis KOD1, complete genomeglycerol kinase1e-1172
NC_014392:2311243:2321811232181123233041494Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeCarbohydrate kinase, FGGY-like2e-1171.6
NC_011772:3259483:3280920328092032824581539Bacillus cereus G9842, complete genomegluconate kinase2e-1171.2
NC_010003:449192:4738804738804753971518Petrotoga mobilis SJ95, complete genomecarbohydrate kinase FGGY5e-1169.7
NC_015436:1:1896518965205151551Spirochaeta coccoides DSM 17374 chromosome, complete genomeCarbohydrate kinase, FGGY9e-1168.9
NC_014721:2043910:2053750205375020552671518Caldicellulosiruptor kristjanssonii 177R1B chromosome, completecarbohydrate kinase, fggy-like protein1e-1068.2
NC_014377:1871333:1881595188159518831001506Thermosediminibacter oceani DSM 16646 chromosome, complete genomexylulokinase3e-1067
NC_015949:47414:5118151181526981518Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomecarbohydrate kinase, FGGY5e-1066.6
NC_015949:428923:4337874337874353041518Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomecarbohydrate kinase, FGGY5e-1066.6
NC_014624:1675500:1714841171484117164001560Eubacterium limosum KIST612 chromosome, complete genomecarbohydrate kinase FGGY4e-1066.6
NC_016047:1978312:1993793199379319952921500Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completexylulokinase6e-1066.2
NC_014652:163347:1655521655521670451494Caldicellulosiruptor hydrothermalis 108 chromosome, completecarbohydrate kinase, fggy-like protein7e-1066.2
NC_010278:1749579:1750860175086017523171458Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,sugar (pentulose and hexulose) kinase8e-1065.9
NC_014976:17909:1939719397208961500Bacillus subtilis BSn5 chromosome, complete genomexylulokinase9e-1065.5
NC_017195:1852935:1874579187457918760781500Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completexylulokinase9e-1065.5
NC_003413:1847935:1852917185291718543891473Pyrococcus furiosus DSM 3638, complete genomeglycerol kinase2e-0964.7
NC_014212:670996:6855946855946870931500Meiothermus silvanus DSM 9946 chromosome, complete genomexylulokinase1e-0964.7
NC_020272:2077795:2097853209785320993521500Bacillus amyloliquefaciens IT-45, complete genomexylulokinase2e-0964.3
NC_013199:392450:3977633977633992921530Lactobacillus rhamnosus Lc 705, complete genomeL-xylulose kinase, cryptic4e-0963.5
NC_009053:1785447:1790122179012217915791458Actinobacillus pleuropneumoniae L20, complete genomeputative L-xylulose kinase5e-0963.2
NC_019896:2158223:2174757217475721762561500Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeXylulose kinase5e-0963.2
NC_010939:1809446:1814121181412118155781458Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeputative L-xylulose kinase5e-0963.2
NC_020244:1875834:1899285189928519007841500Bacillus subtilis XF-1, complete genomexylulose kinase5e-0963.2
NC_000964:1873398:1892604189260418941031500Bacillus subtilis subsp. subtilis str. 168, complete genomexylulose kinase4e-0963.2
NC_011080:3941909:3951337395133739528211485Salmonella enterica subsp. enterica serovar Newport str. SL254,carbohydrate kinase, FGGY family protein6e-0962.8
NC_011740:1595381:1598197159819715997891593Escherichia fergusonii ATCC 35469, complete genomeautoinducer AI-2 kinase7e-0962.8
NC_020410:1781884:1800307180030718018061500Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completexylulose kinase8e-0962.4
NC_007492:2994036:3015575301557530170711497Pseudomonas fluorescens PfO-1, complete genomeXylulokinase9e-0962.4
NC_014479:1831404:1847263184726318487621500Bacillus subtilis subsp. spizizenii str. W23 chromosome, completexylulokinase1e-0862
NC_014624:1675500:1729111172911117306011491Eubacterium limosum KIST612 chromosome, complete genomexylulokinase1e-0862
NC_011094:3853036:3862464386246438639481485Salmonella enterica subsp. enterica serovar Schwarzengrund strsugar kinase1e-0862
NC_019842:1847081:1862453186245318639521500Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,xylulokinase1e-0861.6
NC_006905:3913988:3920420392042039219041485Salmonella enterica subsp. enterica serovar Choleraesuis strputative sugar (pentulose and hexulose) kinase1e-0861.6
NC_015757:4680:2028420284217921509Sulfobacillus acidophilus TPY chromosome, complete genomeCarbohydrate kinase, FGGY-like protein1e-0861.6
NC_020211:3535622:3552699355269935541861488Serratia marcescens WW4, complete genomeL-xylulose kinase1e-0861.6
NC_009487:2656420:2675730267573026772831554Staphylococcus aureus subsp. aureus JH9 chromosome, completegluconate kinase2e-0861.2
NC_009632:2656296:2675606267560626771591554Staphylococcus aureus subsp. aureus JH1 chromosome, completegluconate kinase2e-0861.2
NC_013450:2572530:2591815259181525933681554Staphylococcus aureus subsp. aureus ED98, complete genomegluconokinase2e-0861.2
NC_017343:2474743:2497028249702824985811554Staphylococcus aureus subsp. aureus ECT-R 2, complete genomegluconate kinase2e-0861.2
NC_011149:3895921:3905265390526539067491485Salmonella enterica subsp. enterica serovar Agona str. SL483,putative sugar2e-0861.2
NC_010079:2618345:2637891263789126394441554Staphylococcus aureus subsp. aureus USA300_TCH1516, completegluconokinase3e-0860.8
NC_007795:2561928:2586382258638225879351554Staphylococcus aureus subsp. aureus NCTC 8325, complete genomegluconate kinase3e-0860.8
NC_002951:2554511:2574439257443925759921554Staphylococcus aureus subsp. aureus COL, complete genomegluconokinase3e-0860.8
NC_009641:2619759:2643786264378626453391554Staphylococcus aureus subsp. aureus str. Newman chromosome,gluconate kinase3e-0860.8
NC_016912:2433500:2457593245759324591461554Staphylococcus aureus subsp. aureus VC40 chromosome, completegluconokinase3e-0860.8
NC_017341:2648631:2668007266800726695601554Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,putative gluconokinase3e-0860.8
NC_017347:2616000:2632745263274526342981554Staphylococcus aureus subsp. aureus T0131 chromosome, completegluconate kinase3e-0860.8
NC_008010:321561:3381363381363396411506Deinococcus geothermalis DSM 11300 plasmid 1, complete sequencexylulokinase3e-0860.5
NC_006677:2402282:2428878242887824304821605Gluconobacter oxydans 621H, complete genomePutative carbohydrate kinase3e-0860.5
NC_017342:751496:7565857565857581381554Staphylococcus aureus subsp. aureus TCH60 chromosome, completegluconokinase3e-0860.5
NC_017190:1832402:1850074185007418515731500Bacillus amyloliquefaciens LL3 chromosome, complete genomeXylulokinase3e-0860.5
NC_003197:3971905:3980753398075339822371485Salmonella typhimurium LT2, complete genomeputative sugar kinase4e-0860.1
NC_011083:3985618:3994962399496239964461485Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative sugar kinase4e-0860.1
NC_016810:3993863:4002066400206640035501485Salmonella enterica subsp. enterica serovar Typhimurium strputative sugar (pentulose and hexulose) kinase4e-0860.1
NC_016856:3985597:3994445399444539959291485Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative sugar kinase4e-0860.1
NC_016857:3993864:4002067400206740035511485Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative sugar kinase4e-0860.1
NC_016860:3995445:4003649400364940051331485Salmonella enterica subsp. enterica serovar Typhimurium strputative sugar kinase4e-0860.1
NC_016863:3933848:3942052394205239435361485Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative sugar kinase4e-0860.1
NC_015436:1:1739717397188961500Spirochaeta coccoides DSM 17374 chromosome, complete genomeXylulokinase4e-0860.1
NC_004631:3841975:3852049385204938535331485Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative carbohydrate kinase6e-0859.7
NC_003198:3855157:3866559386655938680431485Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative carbohydrate kinase6e-0859.7
NC_017337:2588331:2600899260089926024521554Staphylococcus aureus subsp. aureus ED133 chromosome, completegluconokinase6e-0859.7
NC_017188:1567000:1591211159121115927101500Bacillus amyloliquefaciens TA208 chromosome, complete genomexylulokinase6e-0859.7
NC_017191:1568369:1592515159251515940141500Bacillus amyloliquefaciens XH7 chromosome, complete genomexylulokinase6e-0859.7
NC_016023:915178:9193569193569208551500Bacillus coagulans 36D1 chromosome, complete genomexylulokinase5e-0859.7
NC_016928:2517691:2541593254159325431461554Staphylococcus aureus subsp. aureus M013 chromosome, completegluconokinase6e-0859.3
NC_002952:2653482:2665677266567726672301554Staphylococcus aureus subsp. aureus MRSA252, complete genomeputative gluconokinase7e-0859.3
NC_017338:2558825:2578181257818125797341554Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeputative gluconokinase8e-0859.3
NC_015577:1462874:1465339146533914668501512Treponema azotonutricium ZAS-9 chromosome, complete genomeL-xylulose/3-keto-L-gulonate kinase1e-0758.9
NC_015634:359500:3963323963323978341503Bacillus coagulans 2-6 chromosome, complete genomexylulokinase1e-0758.9
NC_015732:3105649:3107006310700631084931488Spirochaeta caldaria DSM 7334 chromosome, complete genomexylulokinase9e-0858.9
NC_012962:1661683:1662777166277716643691593Photorhabdus asymbiotica, complete genomehypothetical protein1e-0758.5
NC_017351:2594171:2613267261326726148201554Staphylococcus aureus subsp. aureus 11819-97 chromosome, completegluconate kinase1e-0758.5
NC_003923:2561953:2585646258564625871991554Staphylococcus aureus subsp. aureus MW2, complete genomegluconokinase1e-0758.5
NC_011147:3755725:3764564376456437660481485Salmonella enterica subsp. enterica serovar Paratyphi A strcarbohydrate kinase1e-0758.5
NC_006511:3759550:3768885376888537703691485Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative carbohydrate kinase1e-0758.5
NC_007622:2501562:2513406251340625149591554Staphylococcus aureus RF122, complete genomegluconokinase2e-0758.2
NC_012125:3905782:3915210391521039166161407Salmonella enterica subsp. enterica serovar Paratyphi C straincarbohydrate kinase2e-0758.2
NC_020210:1908000:1908419190841919099181500Geobacillus sp. GHH01, complete genomexylulose kinase2e-0757.8
NC_009725:1787262:1802916180291618044151500Bacillus amyloliquefaciens FZB42, complete genomeXylB2e-0757.8
NC_015697:116000:1160171160171175191503Lactobacillus reuteri SD2112 chromosome, complete genomeglycerol kinase3e-0757.4
NC_016941:2498299:2522854252285425244071554Staphylococcus aureus subsp. aureus MSHR1132, complete genomeputative gluconokinase3e-0757.4
NC_016027:229180:2457772457772472761500Gluconacetobacter xylinus NBRC 3288, complete genomeglycerol kinase2e-0757.4
NC_010102:3919999:3928847392884739303311485Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0757.4
NC_011661:938754:9492829492829508381557Dictyoglomus turgidum DSM 6724, complete genomexylulokinase3e-0757
NC_007482:607365:6171856171856186691485Pseudoalteromonas haloplanktis TAC125 chromosome II, completeputative glycerol kinase3e-0757
NC_016641:4727000:4728047472804747295881542Paenibacillus terrae HPL-003 chromosome, complete genomegluconate kinase3e-0757
NC_011898:3973627:3993555399355539950841530Clostridium cellulolyticum H10, complete genomexylulokinase6e-0756.2
NC_020054:6259733:6266156626615662676551500Fibrella aestuarina BUZ 2 drat genomeglycerol kinase6e-0756.2
NC_019974:1184871:1229314122931412308281515Natronococcus occultus SP4, complete genomepentulose/hexulose kinase9e-0755.8
NC_008027:2051821:2065792206579220672821491Pseudomonas entomophila L48, complete genomeXylulokinase8e-0755.8
NC_017046:3991551:4000894400089440023001407Salmonella enterica subsp. enterica serovar Typhimurium str. 798sugar (pentulose and hexulose) kinase7e-0755.8
NC_010617:263985:2782892782892798301542Kocuria rhizophila DC2201, complete genomeputative sugar kinase1e-0655.5
NC_014212:3091571:3096005309600530975401536Meiothermus silvanus DSM 9946 chromosome, complete genomexylulokinase1e-0655.1
NC_016945:666000:6879176879176894341518Vibrio cholerae IEC224 chromosome II, complete sequenceglycerol kinase1e-0655.1
NC_014246:1787154:1794055179405517953741320Mobiluncus curtisii ATCC 43063 chromosome, complete genomexylulokinase1e-0655.1
UCMB5137:1594000:1596769159676915982471479Bacillus atrophaeus UCMB-5137hydroxylated metabolite kinase2e-0654.7
NC_014206:1745203:1767797176779717692961500Geobacillus sp. C56-T3 chromosome, complete genomexylulokinase2e-0654.7
NC_014210:4377867:4377867437786743793661500Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,glycerol kinase2e-0654.3
NC_006155:652500:6539236539236555151593Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-0654.3
NC_010634:635362:6365286365286381201593Yersinia pseudotuberculosis PB1/+, complete genomecarbohydrate kinase FGGY2e-0654.3
NC_015152:2622000:2631550263155026330311482Spirochaeta sp. Buddy chromosome, complete genomexylulokinase2e-0654.3
NC_017190:2002718:2022464202246420239301467Bacillus amyloliquefaciens LL3 chromosome, complete genomehydroxylated metabolite kinase3e-0653.9
NC_014551:2057971:2077702207770220791681467Bacillus amyloliquefaciens DSM 7, complete genomehydroxylated metabolite kinase3e-0653.9
NC_004463:1520303:1536103153610315376051503Bradyrhizobium japonicum USDA 110, complete genomeglycerol kinase3e-0653.9
NC_010003:225420:2297502297502312221473Petrotoga mobilis SJ95, complete genomexylulokinase4e-0653.5
NC_015224:4426167:4446196444619644476561461Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,xylulose kinase4e-0653.5
NC_011883:1601552:1617882161788216193781497Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,glycerol kinase9e-0652.4
NC_011297:767333:7783557783557799051551Dictyoglomus thermophilum H-6-12, complete genomexylulokinase9e-0652.4