Pre_GI: BLASTP Hits

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Query: NC_008149:3556999:3581895 Yersinia pestis Nepal516, complete genome

Start: 3581895, End: 3582395, Length: 501

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from Nepal. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004088:3689000:371401837140183714521504Yersinia pestis KIM, complete genomehypothetical protein5e-81299
NC_003143:1059580:108591110859111086411501Yersinia pestis CO92, complete genomehypothetical protein7e-81299
NC_008150:317903:331730331730332230501Yersinia pestis Antiqua, complete genomehypothetical protein7e-81299
NC_010634:1755548:177601417760141776514501Yersinia pseudotuberculosis PB1/+, complete genometype VI secretion protein7e-81299
NC_006155:3805640:383200638320063832506501Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein7e-81299
NC_008149:2802392:282679628267962827296501Yersinia pestis Nepal516, complete genomehypothetical protein7e-81299
NC_006155:1756000:177579217757921776292501Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein7e-81299
NC_009708:2788855:284441228444122844912501Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein7e-81299
NC_009708:874770:887643887643888143501Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein7e-81299
NC_014029:961522:974415974415974915501Yersinia pestis Z176003 chromosome, complete genomehypothetical protein7e-81299
NC_017154:902739:916567916567917067501Yersinia pestis D106004 chromosome, complete genomehypothetical protein7e-81299
NC_017160:905783:918676918676919176501Yersinia pestis D182038 chromosome, complete genomehypothetical protein7e-81299
NC_017168:3286:188631886319363501Yersinia pestis A1122 chromosome, complete genomehypothetical protein7e-81299
NC_017265:2586729:261113326111332611633501Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein7e-81299
NC_017265:809943:822831822831823331501Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein7e-81299
NC_004088:2966331:299073229907322991235504Yersinia pestis KIM, complete genomehypothetical protein5e-81299
NC_010159:3120642:313856831385683139068501Yersinia pestis Angola, complete genomehypothetical protein4e-80296
NC_005810:3917254:393282439328243933327504Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein6e-80295
NC_010159:172469:187605187605188105501Yersinia pestis Angola, complete genomehypothetical protein2e-79294
NC_010465:2820500:285597228559722856472501Yersinia pseudotuberculosis YPIII, complete genometype VI secretion protein, VC_A0107 family8e-79292
NC_003143:1630000:165639416563941656894501Yersinia pestis CO92, complete genomehypothetical protein8e-79292
NC_008150:844727:870258870258870758501Yersinia pestis Antiqua, complete genomehypothetical protein8e-79292
NC_010634:3720214:374508137450813745581501Yersinia pseudotuberculosis PB1/+, complete genometype VI secretion protein8e-79292
NC_010465:893921:906784906784907284501Yersinia pseudotuberculosis YPIII, complete genometype VI secretion protein, VC_A0107 family8e-79292
NC_009381:1682000:170807117080711708571501Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein8e-79292
NC_009381:588137:601013601013601513501Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein8e-79292
NC_014029:1702338:172591017259101726410501Yersinia pestis Z176003 chromosome, complete genomehypothetical protein8e-79292
NC_017154:1644404:166797716679771668477501Yersinia pestis D106004 chromosome, complete genomehypothetical protein8e-79292
NC_017160:1628500:164847216484721648972501Yersinia pestis D182038 chromosome, complete genomehypothetical protein8e-79292
NC_017168:3977767:400217740021774002677501Yersinia pestis A1122 chromosome, complete genomehypothetical protein8e-79292
NC_005810:1467772:148530214853021485805504Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein5e-79292
NC_009708:915814:932854932854933354501Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein7e-77285
NC_012962:3568046:360088136008813601540660Photorhabdus asymbiotica, complete genomehypothetical protein2e-64244
NC_009778:1956225:197844619784461978958513Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-59228
NC_010501:3575726:360312936031293603632504Pseudomonas putida W619, complete genometype VI secretion protein, VC_A0107 family2e-58224
NC_009832:1946401:195894919589491959446498Serratia proteamaculans 568, complete genomehypothetical protein9e-58222
NC_015663:4447984:444956244495624450053492Enterobacter aerogenes KCTC 2190 chromosome, complete genometype VI secretion system protein ImpB1e-57221
NC_020181:969599:987040987040987531492Enterobacter aerogenes EA1509E, complete genomeUncharacterized protein ImpB1e-57221
NC_016845:2306744:232623723262372326728492Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein6e-56216
NC_012731:2261787:226918622691862269764579Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein6e-56216
NC_010067:2529750:255838125583812558878498Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-53207
NC_007348:2011957:201785920178592018365507Ralstonia eutropha JMP134 chromosome 2, complete sequencehypothetical protein7e-52202
NC_020260:1993344:200759120075912008268678Cronobacter sakazakii Sp291, complete genometype VI secretion protein9e-51199
NC_012721:1395417:141388414138841414396513Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein5e-51199
NC_014118:1171411:118624111862411186753513Burkholderia sp. CCGE1002 chromosome chromosome 2, completetype VI secretion protein, VC_A0107 family1e-50198
NC_016590:1183470:120183312018331202345513Burkholderia sp. YI23 chromosome 3, complete sequencehypothetical protein3e-50197
NC_010552:592154:596614596614597126513Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetype VI secretion protein, VC_A0107 family3e-50197
NC_016612:5600177:562227256222725622769498Klebsiella oxytoca KCTC 1686 chromosome, complete genometype VI secretion protein6e-47186
NC_012721:240000:245401245401245859459Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein1e-43175
NC_012913:1832500:183793718379371838434498Aggregatibacter aphrophilus NJ8700, complete genometype VI secretion protein, family5e-23107
NC_015559:2745570:274557027455702746085516Marinomonas posidonica IVIA-Po-181 chromosome, complete genometype VI secretion lipoprotein2e-22104
NC_016822:267758:271817271817272317501Shigella sonnei 53G, complete genomehypothetical protein5e-21100
NC_007517:306508:309957309957310445489Geobacter metallireducens GS-15, complete genomehypothetical protein4e-21100
NC_009348:2631759:263548426354842635987504Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein4e-21100
CU928160:256932:258717258717259217501Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein4e-21100
NC_011741:256932:258717258717259217501Escherichia coli IAI1 chromosome, complete genomehypothetical protein4e-21100
NC_009656:3733913:374442337444233744929507Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein9e-2199.4
NC_015968:4117835:415436641543664154884519Enterobacter asburiae LF7a chromosome, complete genometype VI secretion protein1e-2099.4
NC_008570:1986466:199870419987041999207504Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein1e-2099.4
NC_013941:261094:262879262879263379501Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein4e-2097.4
NC_002655:261236:262937262937263437501Escherichia coli O157:H7 EDL933, complete genomehypothetical protein4e-2097.4
NC_002695:261235:262936262936263436501Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein4e-2097.4
NC_011353:261220:262921262921263421501Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein4e-2097.4
NC_013008:261226:262927262927263427501Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein4e-2097.4
NC_011274:1129686:113372011337201134232513Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein5e-2096.7
NC_011149:1110642:111281811128181113321504Salmonella enterica subsp. enterica serovar Agona str. SL483,type VI secretion protein, family6e-2096.7
NC_013592:1424560:143851714385171439020504Dickeya dadantii Ech586, complete genometype VI secretion protein, VC_A0107 family1e-1995.5
NC_004578:2797493:280766528076652808165501Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein4e-1994
NC_013421:1143500:115781711578171158320504Pectobacterium wasabiae WPP163, complete genometype VI secretion protein, VC_A0107 family5e-1993.6
NC_012997:1689583:171040317104031710924522Teredinibacter turnerae T7901, complete genometype VI secretion protein, VC_A0107 family4e-1787
NC_018868:973379:979090979090979608519Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genometype VI secretion protein5e-1787
NC_012779:2619871:263175226317522632264513Edwardsiella ictaluri 93-146, complete genomehypothetical protein6e-1683.6
NC_002947:3492379:349622534962253496800576Pseudomonas putida KT2440, complete genomehypothetical protein8e-1476.3
NC_010322:3084834:310052431005243101063540Pseudomonas putida GB-1 chromosome, complete genometype VI secretion protein1e-1375.5
NC_008314:2744553:274894927489492749485537Ralstonia eutropha H16 chromosome 2, complete sequencehypothetical protein2e-1375.1
NC_009802:114749:137747137747138232486Campylobacter concisus 13826, complete genometype VI secretion protein, family2e-1374.7
NC_020211:3398281:340889034088903409447558Serratia marcescens WW4, complete genometype VI secretion protein, TssB family4e-1373.9
NC_015963:117178:139229139229139735507Enterobacter asburiae LF7a plasmid pENTAS01, complete sequencetype VI secretion protein4e-1373.9
NC_011748:3360967:338712233871223387598477Escherichia coli 55989, complete genomehypothetical protein7e-1373.2
CU928145:3360967:338712233871223387598477Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein7e-1373.2
NC_010159:770172:778332778332778892561Yersinia pestis Angola, complete genomehypothetical protein1e-1272.8
NC_004088:4073698:408431840843184084878561Yersinia pestis KIM, complete genomehypothetical protein1e-1272.8
NC_010634:732016:741984741984742544561Yersinia pseudotuberculosis PB1/+, complete genometype VI secretion protein1e-1272.8
NC_010465:3919572:392774039277403928300561Yersinia pseudotuberculosis YPIII, complete genometype VI secretion protein, VC_A0107 family1e-1272.8
NC_005810:4183297:419146541914654192025561Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-1272.8
NC_003143:524755:533725533725534285561Yersinia pestis CO92, complete genomehypothetical protein1e-1272.8
NC_008150:4601202:461196246119624612522561Yersinia pestis Antiqua, complete genomehypothetical protein1e-1272.8
NC_006155:751235:760224760224760784561Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-1272.8
NC_008149:442168:452928452928453488561Yersinia pestis Nepal516, complete genomehypothetical protein1e-1272.8
NC_009381:3558018:356618635661863566746561Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-1272.8
NC_009708:3862044:387266438726643873224561Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein1e-1272.8
NC_014029:576459:587219587219587779561Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-1272.8
NC_017154:520400:529370529370529930561Yersinia pestis D106004 chromosome, complete genomehypothetical protein1e-1272.8
NC_017160:520799:531559531559532119561Yersinia pestis D182038 chromosome, complete genomehypothetical protein1e-1272.8
NC_017168:561402:569570569570570130561Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-1272.8
NC_017265:3861259:387120838712083871768561Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-1272.8
NC_007511:1094050:109676810967681097307540Burkholderia sp. 383 chromosome 2, complete sequencehypothetical protein9e-1372.8
NC_011751:256830:260614260614261117504Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-1272.4
NC_010086:871723:874441874441874980540Burkholderia multivorans ATCC 17616 chromosome 2, completetype VI secretion protein, VC_A0107 family1e-1272
NC_010805:1576735:160032416003241600863540Burkholderia multivorans ATCC 17616 chromosome 2, completehypothetical protein1e-1272
NC_011745:258727:262511262511263065555Escherichia coli ED1a chromosome, complete genomehypothetical protein2e-1272
NC_011742:258746:262530262530263084555Escherichia coli S88 chromosome, complete genomehypothetical protein2e-1272
NC_008253:257059:261856261856262359504Escherichia coli 536, complete genomehypothetical protein2e-1271.6
NC_008563:258725:262509262509263012504Escherichia coli APEC O1, complete genomehypothetical protein2e-1271.6
NC_007946:258747:262531262531263034504Escherichia coli UTI89, complete genomehypothetical protein2e-1271.6
NC_008391:271254:273986273986274528543Burkholderia cepacia AMMD chromosome 2, complete sequenceUncharacterised conserved protein UCP0283012e-1271.6
NC_014355:1865003:188945418894541889987534Candidatus Nitrospira defluvii, complete genomehypothetical protein2e-1168.6
NC_014623:2216825:223722522372252237845621Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeintracellular growth locus subunit a3e-1167.8
NC_007880:1079634:109749110974911098045555Francisella tularensis subsp. holarctica, complete genomeintracellular growth locus, subunit A5e-1167
NC_008369:1083598:110141811014181102008591Francisella tularensis subsp. holarctica OSU18, complete genomeintracellular growth locus A protein5e-1167
NC_006351:101500:117729117729118268540Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein7e-1166.6
NC_007435:1914375:195619519561951956734540Burkholderia pseudomallei 1710b chromosome II, complete sequencehypothetical protein7e-1166.6
NC_008313:691692:694446694446694979534Ralstonia eutropha H16 chromosome 1, complete sequencehypothetical protein8e-1166.2
NC_012721:137046:157164157164157697534Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein2e-1065.5
NC_014323:4619344:463448546344854634985501Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein5e-1063.9
NC_014310:785220:805843805843806355513Ralstonia solanacearum PSI07 megaplasmid, complete sequencehypothetical protein2e-0962
NC_014306:679888:685322685322685849528Erwinia billingiae Eb661, complete genomeconserved uncharacterized protein2e-0961.6
NC_016816:1823127:182859518285951829125531Pantoea ananatis LMG 5342, complete genometype VI secretion system, core protein2e-0858.2
NC_020064:2921809:292738729273872927926540Serratia marcescens FGI94, complete genometype VI secretion protein, VC_A0107 family2e-0858.2
NC_007510:409843:424831424831425346516Burkholderia sp. 383 chromosome 1, complete sequencehypothetical protein1e-0755.8
NC_008390:407315:425833425833426348516Burkholderia cepacia AMMD chromosome 1, complete sequenceUncharacterised conserved protein UCP0283011e-0755.8
NC_015381:429940:449990449990450508519Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein4e-0753.9
NC_009074:3559211:356183435618343562352519Burkholderia pseudomallei 668 chromosome I, complete sequencehypothetical protein8e-0753.1
NC_006350:3710641:371272437127243713242519Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein8e-0753.1