Pre_GI: BLASTP Hits

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Query: NC_008149:3251196:3265555 Yersinia pestis Nepal516, complete genome

Start: 3265555, End: 3266097, Length: 543

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from Nepal. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:1136000:113910711391071139649543Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative prophage protein7e-103372
NC_017168:4155143:415979341597934160335543Yersinia pestis A1122 chromosome, complete genomeputative prophage protein7e-103372
NC_009381:2939782:295414029541402954682543Yersinia pestis Pestoides F chromosome, complete genomeprophage protein7e-103372
NC_005810:1130251:114461011446101145152543Yersinia pestis biovar Microtus str. 91001, complete genomeputative prophage protein7e-103372
NC_003143:1233128:123777712377771238319543Yersinia pestis CO92, complete genomeputative prophage protein7e-103372
NC_008150:650899:654513654513655055543Yersinia pestis Antiqua, complete genomeputative prophage protein7e-103372
NC_004088:3382148:339650633965063397048543Yersinia pestis KIM, complete genomehypothetical protein7e-103372
NC_012912:4194821:419766041976604198199540Dickeya zeae Ech1591, complete genomeprophage protein2e-40165
NC_012880:4117376:411990341199034120442540Dickeya dadantii Ech703, complete genomeprophage protein1e-39162
NC_013592:4295449:430045943004594300995537Dickeya dadantii Ech586, complete genomePhage P4, Ash protein-like protein1e-39162
NC_014500:443874:459613459613460152540Dickeya dadantii 3937 chromosome, complete genomeputative prophage protein2e-38158
NC_010159:1417993:142192914219291422117189Yersinia pestis Angola, complete genomeputative prophage protein1e-28125
NC_014500:2019113:204330220433022044042741Dickeya dadantii 3937 chromosome, complete genomeputative prophage protein1e-21102
NC_012917:833721:837635837635838179545Pectobacterium carotovorum subsp. carotovorum PC1, complete genome5e-1580.9
NC_007712:2897000:290163729016372902236600Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein6e-1373.6
NC_014500:3744705:376033637603363760857522Dickeya dadantii 3937 chromosome, complete genomeputative prophage protein9e-1166.2
NC_004547:1873390:192164819216481921920273Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein3e-0961.2
NC_012917:3684840:368902836890283689222195Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein4e-0960.8
NC_012917:833721:837448837448837642195Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein6e-0960.5
NC_013008:306953:323638323638324195558Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeregulator encoded in prophage CP-933I7e-0960.1
NC_002695:301939:318446318446319003558Escherichia coli O157:H7 str. Sakai, complete genomeputative CI repressor7e-0960.1
NC_002655:301940:318447318447319004558Escherichia coli O157:H7 EDL933, complete genomeputative regulator encoded in prophage CP-933I7e-0960.1
NC_013941:338121:359420359420359977558Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeCI repressor7e-0960.1
NC_014306:4901390:493954549395454940084540Erwinia billingiae Eb661, complete genomePutative prophage CI repressor1e-0756.2
NC_012880:2778795:278202427820242782224201Dickeya dadantii Ech703, complete genomehypothetical protein1e-0756.2
NC_008800:4488112:449851244985124498793282Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein1e-0756.2
NC_015061:4203767:421104042110404211261222Rahnella sp. Y9602 chromosome, complete genomehypothetical protein5e-0753.9
NC_017047:4298207:430498143049814305202222Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein5e-0753.9
NC_016818:4215836:422674642267464226967222Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein6e-0753.5
NC_012917:1840172:187051818705181870697180Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein8e-0753.5
NC_012917:3684840:368921536892153689756542Pectobacterium carotovorum subsp. carotovorum PC1, complete genome2e-0652.4
NC_011353:305820:322551322551322883333Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprotein ash2e-0652.4
NC_009778:567000:595759595759596091333Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-0651.6
NC_013592:2703327:270627027062702706458189Dickeya dadantii Ech586, complete genomehypothetical protein6e-0650.4