Pre_GI: BLASTP Hits

Some Help

Query: NC_008149:2366500:2375496 Yersinia pestis Nepal516, complete genome

Start: 2375496, End: 2376218, Length: 723

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from Nepal. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009381:2138625:216592021659202166642723Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein7e-124442
NC_004088:1851500:185773618577361858458723Yersinia pestis KIM, complete genomehypothetical protein7e-124442
NC_005810:2549680:257976625797662580434669Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein4e-113407
NC_003143:2804500:281371228137122814380669Yersinia pestis CO92, complete genomehypothetical protein4e-113407
NC_014029:2756500:276603527660352766703669Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-113407
NC_017154:2804000:281318528131852813853669Yersinia pestis D106004 chromosome, complete genomehypothetical protein4e-113407
NC_017160:2787637:279520227952022795870669Yersinia pestis D182038 chromosome, complete genomehypothetical protein4e-113407
NC_017168:2941938:294805629480562948724669Yersinia pestis A1122 chromosome, complete genomehypothetical protein4e-113407
NC_017265:1571305:157887115788711579539669Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein4e-113407
NC_010159:1818500:182775018277501828418669Yersinia pestis Angola, complete genomehypothetical protein2e-112404
NC_006155:2979500:300693930069393007601663Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein6e-25114
NC_009708:1735903:174549317454931746155663Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein1e-24113
NC_010634:2894631:292488729248872925549663Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein7e-22103
NC_010634:2894631:292572629257262926298573Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein7e-1270.9
NC_006155:2979500:300778430077843008356573Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-1170.5
NC_009708:1735903:174473417447341745306573Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein1e-1170.1
NC_010159:1818500:182861418286141829156543Yersinia pestis Angola, complete genomehypothetical protein5e-0858.2
NC_004088:1851500:185705218570521857594543Yersinia pestis KIM, complete genomehypothetical protein5e-0858.2
NC_005810:2549680:258063025806302581172543Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein5e-0858.2
NC_008149:2366500:237636023763602376902543Yersinia pestis Nepal516, complete genomehypothetical protein5e-0858.2
NC_009381:2138625:216678421667842167326543Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein5e-0858.2
NC_014029:2756500:276689927668992767441543Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-0858.2
NC_017154:2804000:281404928140492814591543Yersinia pestis D106004 chromosome, complete genomehypothetical protein5e-0858.2
NC_017160:2787637:279446427944642795006543Yersinia pestis D182038 chromosome, complete genomehypothetical protein5e-0858.2
NC_017168:2941938:294731829473182947860543Yersinia pestis A1122 chromosome, complete genomehypothetical protein5e-0858.2
NC_017265:1571305:157813315781331578675543Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein5e-0858.2
NC_003143:2804500:281457628145762815118543Yersinia pestis CO92, complete genomehypothetical protein5e-0858.2