Pre_GI: BLASTP Hits

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Query: NC_008149:1122693:1140586 Yersinia pestis Nepal516, complete genome

Start: 1140586, End: 1141518, Length: 933

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from Nepal. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:3240379:325569732556973256629933Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,O-unit polymerase-like protein5e-149526
NC_008150:2878450:289377628937762894708933Yersinia pestis Antiqua, complete genomeO-unit polymerase-like protein5e-149526
NC_017160:3426486:344151534415153442411897Yersinia pestis D182038 chromosome, complete genomeO-unit polymerase-like protein5e-142503
NC_017154:3444497:345951534595153460411897Yersinia pestis D106004 chromosome, complete genomeO-unit polymerase-like protein5e-142503
NC_014029:3501500:351650835165083517404897Yersinia pestis Z176003 chromosome, complete genomeO-unit polymerase-like protein5e-142503
NC_010159:1288000:1303940130394013050341095Yersinia pestis Angola, complete genome1e-124446
NC_006155:1191307:1208987120898712102071221Yersinia pseudotuberculosis IP 32953, complete genome(AJ251712) O-unit polymerase-like protein [Yersinia pse...1e-124446
NC_009381:3094939:3110250311025031114701221Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein8e-125446
NC_009708:3411153:3426106342610634273261221Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeO-antigen biosynthesis protein Wxy8e-125446
NC_010465:3465351:3482447348244734837061260Yersinia pseudotuberculosis YPIII, complete genomeO-antigen biosynthesis protein Wxy1e-38160
NC_011979:2352961:2365817236581723670611245Geobacter sp. FRC-32, complete genomehypothetical protein7e-30131
NC_010067:807129:8152108152108163611152Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-22106