Pre_GI: BLASTP Hits

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Query: NC_008149:1122693:1124725 Yersinia pestis Nepal516, complete genome

Start: 1124725, End: 1125057, Length: 333

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from Nepal. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:3240379:327215632721563272488333Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein5e-46182
NC_006155:1191307:119333911933391193671333Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein5e-46182
NC_004088:1196875:119687511968751197207333Yersinia pestis KIM, complete genomehypothetical protein5e-46182
NC_010634:1175404:117540411754041175736333Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein5e-46182
NC_010159:3033989:303602130360213036353333Yersinia pestis Angola, complete genomeconserved hypothetical protein TIGR001035e-46182
NC_010465:3465351:349698234969823497314333Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein5e-46182
NC_008150:2878450:291023729102372910569333Yersinia pestis Antiqua, complete genomehypothetical protein5e-46182
NC_005810:872672:874704874704875036333Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein5e-46182
NC_009381:3094939:312670831267083127040333Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein5e-46182
NC_009708:3411153:344275234427523443084333Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein5e-46182
NC_017168:2281040:228307222830722283404333Yersinia pestis A1122 chromosome, complete genomehypothetical protein5e-46182
NC_015224:1391088:139376113937611394093333Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein1e-44178
NC_008800:3330944:336337833633783363710333Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein1e-44178
NC_009092:2589000:261129326112932611622330Shewanella loihica PV-4, complete genomeconserved hypothetical protein 1033e-36149
NC_017256:515579:533553533553533882330Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,DNA-binding protein3e-34143
NC_016893:218376:222081222081222407327Wigglesworthia glossinidia endosymbiont of Glossina morsitansDNA-binding protein3e-31133
NC_010501:3987615:398908139890813989416336Pseudomonas putida W619, complete genomehypothetical protein2e-25114
NC_015733:4130000:413001841300184130353336Pseudomonas putida S16 chromosome, complete genomehypothetical protein3e-25113
NC_004344:589375:609366609366609674309Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein8e-25112
NC_008027:1847040:187045918704591870794336Pseudomonas entomophila L48, complete genomehypothetical protein1e-24112
NC_020829:3434736:343839234383923438718327Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein2e-24111
NC_004545:499709:501046501046501378333Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomehypothetical protein YbaB2e-24111
NC_015410:2258800:228094122809412281267327Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein3e-24110
NC_012560:1965251:197274619727461973072327Azotobacter vinelandii DJ, complete genomeConserved hypothetical protein 1033e-24110
NC_021150:1965264:197275919727591973085327Azotobacter vinelandii CA6, complete genomehypothetical protein3e-24110
NC_007508:1221500:125962012596201259940321Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein2e-23107
NC_016147:2337244:233896323389632339283321Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein1e-22105
NC_016010:1169850:118947611894761189796321Xanthomonas axonopodis pv. citrumelo F1 chromosome, completehypothetical protein1e-22105
NC_004757:427483:472265472265472588324Nitrosomonas europaea ATCC 19718, complete genomeDUF149:Conserved hypothetical protein 1032e-21100
NC_008825:2700617:270180027018002702126327Methylibium petroleiphilum PM1, complete genomehypothetical protein2e-21100
NC_008786:557314:576631576631576963333Verminephrobacter eiseniae EF01-2, complete genomeconserved hypothetical protein 1032e-1994.4
NC_019814:320260:325599325599325922324Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonashypothetical protein9e-1785.5
NC_008767:1363288:137462713746271374962336Neisseria meningitidis FAM18, complete genomehypothetical protein3e-1684
NC_019815:782987:784710784710785033324Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneihypothetical protein3e-1684
NC_014752:1363562:137464813746481374983336Neisseria lactamica ST-640, complete genomehypothetical protein3e-1683.6
NC_010172:2082000:208203520820352082358324Methylobacterium extorquens PA1, complete genomehypothetical protein6e-1682.8
NC_012988:2455807:245580724558072456130324Methylobacterium extorquens DM4, complete genomehypothetical protein6e-1682.8
NC_009720:2424975:242760324276032427923321Xanthobacter autotrophicus Py2, complete genomehypothetical protein2e-1374.7
NC_020299:149118:154438154438154761324Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeYbaB/EbfC family DNA-binding protein8e-1269.3
NC_014355:243543:249088249088249411324Candidatus Nitrospira defluvii, complete genomehypothetical protein2e-1167.4
NC_014831:65408:692946929469626333Thermaerobacter marianensis DSM 12885 chromosome, complete genomeUncharacterized protein family UPF01335e-1063.2
NC_014655:17641:349643496435293330Leadbetterella byssophila DSM 17132 chromosome, complete genomeuncharacterized protein family upf01331e-0961.6
NC_011296:1039749:103940810394081039752345Thermodesulfovibrio yellowstonii DSM 11347, complete genomehypothetical protein8e-0959.3
NC_013316:1:219262192622276351Clostridium difficile R20291, complete genomehypothetical protein6e-0959.3
NC_009089:1:221662216622516351Clostridium difficile 630, complete genomehypothetical protein6e-0959.3
NC_013520:1860286:186624318662431866572330Veillonella parvula DSM 2008, complete genomehypothetical protein2e-0858.2
UCMB5137:1396603:140126814012681401591324Bacillus atrophaeus UCMB-5137hypothetical protein2e-0857.8
NC_010556:26567:282762827628596321Exiguobacterium sibiricum 255-15, complete genomehypothetical protein3e-0857
NC_018665:1:282262822628546321Exiguobacterium antarcticum B7 chromosome, complete genomeYbaB/EbfC DNA-binding family proteina3e-0857
NC_017167:129988:133641133641133952312Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1hypothetical protein4e-0856.6
NC_019970:35985:402624026240597336Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeDNA-binding protein, YbaB/EbfC family4e-0856.6
NC_008346:36176:377173771738016300Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehypothetical protein5e-0856.6
NC_015958:57957:615466154661881336Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehypothetical protein6e-0856.2
NC_014964:2237979:225881822588182259153336Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehypothetical protein6e-0856.2
NC_010321:2256758:227167422716742272009336Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completehypothetical protein6e-0856.2
NC_016148:951446:970364970364970672309Thermovirga lienii DSM 17291 chromosome, complete genomehypothetical protein6e-0856.2
NC_014410:51711:553345533455669336Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,hypothetical protein5e-0856.2
NC_010320:33814:395323953239867336Thermoanaerobacter sp. X514 chromosome, complete genomehypothetical protein8e-0855.8
NC_014538:33718:394363943639771336Thermoanaerobacter sp. X513 chromosome, complete genomehypothetical protein8e-0855.8
NC_014219:25845:338013380134103303Bacillus selenitireducens MLS10 chromosome, complete genomehypothetical protein1e-0755.1
NC_015737:981712:996224996224996568345Clostridium sp. SY8519, complete genomehypothetical protein2e-0754.7
NC_006177:12383:179611796118290330Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein2e-0754.7
NC_013921:36000:419534195342288336Thermoanaerobacter italicus Ab9 chromosome, complete genomehypothetical protein2e-0754.3
NC_014209:81643:100333100333100668336Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,hypothetical protein2e-0754.3
NC_011567:1:272592725927591333Anoxybacillus flavithermus WK1, complete genomehypothetical protein2e-0754.3
NC_014171:1:273312733127660330Bacillus thuringiensis BMB171 chromosome, complete genomehypothetical protein3e-0753.9
NC_017208:1:271092710927438330Bacillus thuringiensis serovar chinensis CT-43 chromosome, completehypothetical protein3e-0753.9
NC_016012:16134:448914489145226336Candidatus Arthromitus sp. SFB-rat-Yit, complete genometranscriptional regulatory protein3e-0753.9
NC_009487:522193:539641539641539958318Staphylococcus aureus subsp. aureus JH9 chromosome, completehypothetical protein5e-0753.1
NC_009632:522264:539712539712540029318Staphylococcus aureus subsp. aureus JH1 chromosome, completehypothetical protein5e-0753.1
NC_017297:33519:353123531235551240Clostridium botulinum F str. 230613 chromosome, complete genomehypothetical protein5e-0753.1
NC_009495:38000:397853978540126342Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein4e-0753.1
NC_009697:38000:398003980040141342Clostridium botulinum A str. ATCC 19397 chromosome, completehypothetical protein4e-0753.1
NC_009698:38000:398003980040141342Clostridium botulinum A str. Hall chromosome, complete genomehypothetical protein4e-0753.1
NC_009699:33452:351423514235483342Clostridium botulinum F str. Langeland chromosome, complete genomehypothetical protein4e-0753.1
NC_015913:35837:419994199942334336Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomehypothetical protein7e-0752.8
NC_002952:494500:512344512344512661318Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein6e-0752.8
NC_002745:487500:504381504381504698318Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein6e-0752.8
NC_003923:473743:489760489760490077318Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein6e-0752.8
NC_002758:511247:528695528695529012318Staphylococcus aureus subsp. aureus Mu50, complete genomehypothetical protein6e-0752.8
NC_013450:448054:465502465502465819318Staphylococcus aureus subsp. aureus ED98, complete genomehypothetical protein6e-0752.8
NC_017337:498688:516136516136516453318Staphylococcus aureus subsp. aureus ED133 chromosome, completehypothetical protein6e-0752.8
NC_017338:470993:487789487789488106318Staphylococcus aureus subsp. aureus JKD6159 chromosome, completehypothetical protein6e-0752.8
NC_014976:2231984:224054522405452240868324Bacillus subtilis BSn5 chromosome, complete genomehypothetical protein1e-0652.4
NC_007333:39579:466824668247032351Thermobifida fusca YX, complete genomeConserved hypothetical protein 1038e-0752.4
NC_012121:113912:120372120372120689318Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein8e-0752.4
NC_013939:148706:150332150332150646315Deferribacter desulfuricans SSM1, complete genomehypothetical protein1e-0652
NC_014654:391201:398191398191398499309Halanaerobium sp. 'sapolanicus' chromosome, complete genomeUncharacterized protein family UPF01331e-0652
NC_015738:873653:888702888702889010309Eggerthella sp. YY7918, complete genomehypothetical protein1e-0652
NC_013510:5499447:551658655165865516945360Thermomonospora curvata DSM 43183, complete genomehypothetical protein1e-0652
NC_014376:189319:190946190946191299354Clostridium saccharolyticum WM1 chromosome, complete genomehypothetical protein2e-0651.2
NC_007503:2338110:237324123732412373570330Carboxydothermus hydrogenoformans Z-2901, complete genomeconserved hypothetical protein TIGR001033e-0650.4
NC_014387:281157:285854285854286210357Butyrivibrio proteoclasticus B316 chromosome 1, complete genomehypothetical protein4e-0650.4
NC_019978:39000:423584235842666309Halobacteroides halobius DSM 5150, complete genomeDNA-binding protein, YbaB/EbfC family9e-0648.9