Pre_GI: BLASTP Hits

Some Help

Query: NC_008148:672608:685622 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 685622, End: 686185, Length: 564

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017295:1507956:152516615251661525723558Clostridium acetobutylicum EA 2018 chromosome, complete genomeadenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase9e-25113
NC_003030:1510000:152575215257521526309558Clostridium acetobutylicum ATCC 824, complete genomeadenosylcobinamide kinase9e-25113
NC_015687:1508664:152735315273531527910558Clostridium acetobutylicum DSM 1731 chromosome, complete genomeadenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase9e-25113
NC_016148:141011:156789156789157373585Thermovirga lienii DSM 17291 chromosome, complete genomeadenosylcobinamide kinase7e-22103
NC_015663:4950000:495075949507594951301543Enterobacter aerogenes KCTC 2190 chromosome, complete genomeadenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase3e-21101
NC_004631:948054:947512947512948057546Salmonella enterica subsp. enterica serovar Typhi Ty2, completeadenosylcobinamide kinase3e-1994.7
NC_014632:567289:578073578073578633561Ilyobacter polytropus DSM 2926 chromosome, complete genomeadenosylcobinamide kinase4e-1994.4
NC_005126:3485330:348814134881413488686546Photorhabdus luminescens subsp. laumondii TTO1, complete genomeadenosylcobinamide kinase7e-1993.6
NC_012962:1827000:184231918423191842864546Photorhabdus asymbiotica, complete genomebifunctional cobalamin biosynthesis protein cobu2e-1892
NC_016751:1700164:171346917134691714029561Marinitoga piezophila KA3 chromosome, complete genomeadenosyl cobinamide kinase3e-1891.7
NC_011149:2040396:205698120569812057526546Salmonella enterica subsp. enterica serovar Agona str. SL483,bifunctional adenosylcobalamin biosynthesis protein CobU3e-1891.3
NC_011094:2061000:207866920786692079214546Salmonella enterica subsp. enterica serovar Schwarzengrund stradenosylcobinamide kinase3e-1891.3
NC_015437:1038476:103847610384761039033558Selenomonas sputigena ATCC 35185 chromosome, complete genomeAdenosylcobinamide-phosphate guanylyltransferase6e-1890.5
NC_012488:1159463:116019911601991160756558Listeria monocytogenes Clip81459, complete genomebifunctional cobalamin biosynthesis protein CopB1e-1789
NC_013892:853366:854121854121854666546Xenorhabdus bovienii SS-2004 chromosome, complete genomebifunctional cobinamide kinase/cobinamide phosphate guanylyltransferase1e-1789.4
NC_014483:1376500:138717113871711387737567Paenibacillus polymyxa E681 chromosome, complete genomeBifunctional adenosylcobalamin biosynthesis protein cobP2e-1789
NC_009800:2083465:210382121038212104366546Escherichia coli HS, complete genomecobinamide kinase/cobinamide phosphate guanyltransferase2e-1788.6
NC_016822:2201388:224333522433352243880546Shigella sonnei 53G, complete genomeadenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase7e-1787
NC_013517:1055854:110054711005471101101555Sebaldella termitidis ATCC 33386, complete genomeAdenosylcobinamide-phosphate guanylyltransferase8e-1786.7
NC_011601:2139188:218025421802542180799546Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeadenosylcobinamide kinase9e-1786.7
NC_015064:2341152:236903523690352369580546Acidobacterium sp. MP5ACTX9 chromosome, complete genomeAdenosylcobinamide-phosphate guanylyltransferase1e-1685.9
CP002797:2062006:206620920662092066754546Escherichia coli NA114, complete genomeAdenosylcobinamide-phosphate guanylyltransferase1e-1685.9
NC_004431:2304280:232010723201072320652546Escherichia coli CFT073, complete genomeadenosylcobinamide kinase1e-1685.9
NC_007946:2155454:217127221712722171817546Escherichia coli UTI89, complete genomecobalamin biosynthesis protein CobU1e-1685.9
NC_008253:2056734:207258420725842073129546Escherichia coli 536, complete genomecobalamin biosynthesis protein CobU1e-1685.9
NC_000913:2042935:206324320632432063788546Escherichia coli K12, complete genomeadenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase1e-1686.3
NC_010473:2119480:215425121542512154796546Escherichia coli str. K-12 substr. DH10B, complete genomebifunctional cobinamide kinase and cobinamide phosphate guanylyltransferase1e-1686.3
AC_000091:2027648:206735620673562067901546Escherichia coli W3110 DNA, complete genomebifunctional cobinamide kinase and cobinamide phosphate guanylyltransferase1e-1686.3
NC_011745:2209288:227226022722602272805546Escherichia coli ED1a chromosome, complete genomeadenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase1e-1686.3
NC_012759:1920955:195572619557261956271546Escherichia coli BW2952 chromosome, complete genomeadenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase1e-1686.3
NC_012947:1769438:176889617688961769441546Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeadenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase1e-1686.3
NC_012967:1967675:200321920032192003764546Escherichia coli B str. REL606 chromosome, complete genomeadenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase1e-1686.3
NC_010468:1816359:181635918163591816904546Escherichia coli ATCC 8739, complete genomeAdenosylcobinamide kinase1e-1686.3
AP010958:2455052:246030624603062460851546Escherichia coli O103:H2 str. 12009 DNA, complete genomebifunctional cobinamide kinase and cobinamide phosphate guanylyltransferase3e-1684.7
NC_013353:2455052:246030624603062460851546Escherichia coli O103:H2 str. 12009, complete genomebifunctional cobinamide kinase and cobinamide phosphate guanylyltransferase3e-1684.7
NC_014622:1514416:152492915249291525489561Paenibacillus polymyxa SC2 chromosome, complete genomeadenosylcobinamide-phosphate guanylyltransferase3e-1684.7
NC_004369:2203947:222113022211302221660531Corynebacterium efficiens YS-314, complete genomeputative cobinamide kinase/cobinamide phosphate guanylyltransferase2e-1479
NC_021171:415771:434709434709435248540Bacillus sp. 1NLA3E, complete genomebifunctional adenosylcobalamin biosynthesis protein2e-1479
NC_012491:1263469:126797612679761268515540Brevibacillus brevis NBRC 100599, complete genomebifunctional adenosylcobalamin biosynthesis protein2e-1478.6
NC_019673:1656680:166276916627691663326558Saccharothrix espanaensis DSM 44229 complete genomeCobalbumin biosynthesis protein8e-1476.6
NC_016776:2913966:291757129175712918089519Bacteroides fragilis 638R, complete genomebifunctional cobalamin biosynthesis protein9e-1476.6
NC_003228:2929006:293261129326112933129519Bacteroides fragilis NCTC 9343, complete genomebifunctional cobalamin biosynthesis protein9e-1476.6
NC_007951:1042291:106844310684431068997555Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative cobinamide kinase/adenosyl cobinamidephosphate guanylyltransferase1e-1273.2
NC_007481:3167434:318610931861093186636528Pseudoalteromonas haloplanktis TAC125 chromosome I, completeadenosylcobalamin biosynthesis protein3e-1271.6
NC_007643:791500:793164793164793736573Rhodospirillum rubrum ATCC 11170, complete genomeCobalbumin biosynthesis enzyme1e-1169.3
NC_016641:3173250:318428831842883185052765Paenibacillus terrae HPL-003 chromosome, complete genomebifunctional adenosylcobalamin biosynthesis adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase CobP/CobU1e-1169.3
NC_016802:1615748:163210416321041632652549Corynebacterium diphtheriae HC02 chromosome, complete genomeputative cobinamide kinase7e-1167
NC_015497:3794000:381550438155043816052549Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeAdenosylcobinamide-phosphate guanylyltransferase2e-1065.1
NC_014221:398636:4219054219054239532049Truepera radiovictrix DSM 17093 chromosome, complete genomecobyric acid synthase CobQ3e-1064.7
NC_009718:1470972:147693214769321477429498Fervidobacterium nodosum Rt17-B1, complete genomecobalbumin biosynthesis protein1e-0962.8
NC_005125:760721:798295798295798855561Gloeobacter violaceus PCC 7421, complete genomebifunctional cobalamin biosynthesis protein1e-0963.2
NC_009831:4539952:453995245399524540551600Shewanella sediminis HAW-EB3, complete genomecobalbumin biosynthesis enzyme8e-0857
NC_008321:977500:999193999193999795603Shewanella sp. MR-4, complete genomecobalbumin biosynthesis enzyme8e-0856.6
NC_011992:1038985:105546810554681056067600Acidovorax ebreus TPSY, complete genomecobalbumin biosynthesis protein9e-0856.6
NC_011060:1334836:135305413530541353590537Pelodictyon phaeoclathratiforme BU-1, complete genomeAdenosylcobinamide-phosphate guanylyltransferase1e-0756.6
NC_008782:1136732:115320911532091153808600Acidovorax sp. JS42, complete genomecobalbumin biosynthesis enzyme1e-0756.2
NC_015422:1163752:118736211873621187946585Alicycliphilus denitrificans K601 chromosome, complete genomeadenosylcobinamide-phosphate guanylyltransferase2e-0755.5
NC_011666:1923776:193929519392951939849555Methylocella silvestris BL2, complete genomeAdenosylcobinamide kinase3e-0651.6